RNA–Protein interactions for RNA: ENST00000498658.5

FXR1-222, Transcript of FMR1 autosomal homolog 1, human

TSL 2

Gene FXR1, Length 683 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FXR1-222	ENST00000498658	RANBP2	P49792	3224 aa	Known RBP	12.05	□□□□□ -0.48
FXR1-222	ENST00000498658	SMCO2	A6NFE2	343 aa		12.05	□□□□□ -0.48
FXR1-222	ENST00000498658	STXBP3	O00186	592 aa		12.05	□□□□□ -0.48
FXR1-222	ENST00000498658	PPFIA4	O75335	1185 aa		12.05	□□□□□ -0.48
FXR1-222	ENST00000498658	MMP3	P08254	477 aa		12.05	□□□□□ -0.48
FXR1-222	ENST00000498658	SUPT20HL2	P0C7V6	817 aa		12.05	□□□□□ -0.48
FXR1-222	ENST00000498658	RAG1	P15918	1043 aa		12.05	□□□□□ -0.48
FXR1-222	ENST00000498658	GNA11	P29992	359 aa		12.05	□□□□□ -0.48
FXR1-222	ENST00000498658	PTPN11	Q06124	597 aa	Predicted RBP	12.05	□□□□□ -0.48
FXR1-222	ENST00000498658	ARHGAP1	Q07960	439 aa		12.05	□□□□□ -0.48
FXR1-222	ENST00000498658	FAAP100	Q0VG06	881 aa		12.05	□□□□□ -0.48
FXR1-222	ENST00000498658	AP3B2	Q13367	1082 aa		12.05	□□□□□ -0.48
FXR1-222	ENST00000498658	TOB2	Q14106	344 aa	Predicted RBP	12.05	□□□□□ -0.48
FXR1-222	ENST00000498658	FAM126B	Q8IXS8	530 aa		12.05	□□□□□ -0.48
FXR1-222	ENST00000498658	PIP4P2	Q8N4L2	257 aa		12.05	□□□□□ -0.48
FXR1-222	ENST00000498658	CCDC148	Q8NFR7	591 aa		12.05	□□□□□ -0.48
FXR1-222	ENST00000498658	BICD2	Q8TD16	824 aa		12.05	□□□□□ -0.48
FXR1-222	ENST00000498658	AFG1L	Q8WV93	481 aa		12.05	□□□□□ -0.48
FXR1-222	ENST00000498658	COPS5	Q92905	334 aa		12.05	□□□□□ -0.48
FXR1-222	ENST00000498658	IL17RA	Q96F46	866 aa		12.05	□□□□□ -0.48
FXR1-222	ENST00000498658	SENP7	Q9BQF6	1050 aa		12.05	□□□□□ -0.48
FXR1-222	ENST00000498658	KATNAL1	Q9BW62	490 aa		12.05	□□□□□ -0.48
FXR1-222	ENST00000498658	MLXIP	Q9HAP2	919 aa		12.05	□□□□□ -0.48
FXR1-222	ENST00000498658	C6orf50	Q9HD87	102 aa		12.05	□□□□□ -0.48
FXR1-222	ENST00000498658	PCDHA6	Q9UN73	950 aa		12.05	□□□□□ -0.48
FXR1-222	ENST00000498658	PCDHA8	Q9Y5H6	950 aa		12.05	□□□□□ -0.48
FXR1-222	ENST00000498658	ESYT2	A0FGR8	921 aa		12.04	□□□□□ -0.48
FXR1-222	ENST00000498658	SPATA31C2	B4DYI2	1134 aa		12.04	□□□□□ -0.48
FXR1-222	ENST00000498658	CDKL5	O76039	1030 aa		12.04	□□□□□ -0.48
FXR1-222	ENST00000498658	RGS20	O76081	388 aa		12.04	□□□□□ -0.48
FXR1-222	ENST00000498658	GGPS1	O95749	300 aa		12.04	□□□□□ -0.48
FXR1-222	ENST00000498658	CCT2	P78371	535 aa	Known RBP	12.04	□□□□□ -0.48
FXR1-222	ENST00000498658	MRPS9	P82933	396 aa	Known RBP	12.04	□□□□□ -0.48
FXR1-222	ENST00000498658	MDM2	Q00987	491 aa	Predicted RBP	12.04	□□□□□ -0.48
FXR1-222	ENST00000498658	NTRK3	Q16288	839 aa		12.04	□□□□□ -0.48
FXR1-222	ENST00000498658	CELF3	Q5SZQ8	465 aa	Known RBP	12.04	□□□□□ -0.48
FXR1-222	ENST00000498658	MYSM1	Q5VVJ2	828 aa		12.04	□□□□□ -0.48
FXR1-222	ENST00000498658	NFRKB	Q6P4R8	1299 aa		12.04	□□□□□ -0.48
FXR1-222	ENST00000498658	TDH	Q8IZJ6	230 aa		12.04	□□□□□ -0.48
FXR1-222	ENST00000498658	FAM177A1	Q8N128	213 aa	Predicted RBP	12.04	□□□□□ -0.48
FXR1-222	ENST00000498658	IL31RA	Q8NI17	732 aa		12.04	□□□□□ -0.48
FXR1-222	ENST00000498658	GPRASP2	Q96D09	838 aa		12.04	□□□□□ -0.48
FXR1-222	ENST00000498658	SPATA33	Q96N06	139 aa		12.04	□□□□□ -0.48
FXR1-222	ENST00000498658	ZMYND12	Q9H0C1	365 aa		12.04	□□□□□ -0.48
FXR1-222	ENST00000498658	TRIM43B	A6NCK2	446 aa		12.03	□□□□□ -0.48
FXR1-222	ENST00000498658	NOP56	O00567	594 aa	Known RBP	12.03	□□□□□ -0.48
FXR1-222	ENST00000498658	TIMP1	P01033	207 aa		12.03	□□□□□ -0.48
FXR1-222	ENST00000498658	CD4	P01730	458 aa		12.03	□□□□□ -0.48
FXR1-222	ENST00000498658	UBA1	P22314	1058 aa	Known RBP	12.03	□□□□□ -0.48
FXR1-222	ENST00000498658	PTGS1	P23219	599 aa		12.03	□□□□□ -0.48
FXR1-222	ENST00000498658	SSRP1	Q08945	709 aa	Known RBP	12.03	□□□□□ -0.48
FXR1-222	ENST00000498658	UBE2S	Q16763	222 aa		12.03	□□□□□ -0.48
FXR1-222	ENST00000498658	PHKB	Q93100	1093 aa		12.03	□□□□□ -0.48
FXR1-222	ENST00000498658	TRIM43	Q96BQ3	446 aa	Predicted RBP	12.03	□□□□□ -0.48
FXR1-222	ENST00000498658	SLC26A6	Q9BXS9	759 aa		12.03	□□□□□ -0.48
FXR1-222	ENST00000498658	SLK	Q9H2G2	1235 aa	Predicted RBP	12.03	□□□□□ -0.48
FXR1-222	ENST00000498658	SH3GLB2	Q9NR46	395 aa		12.03	□□□□□ -0.48
FXR1-222	ENST00000498658	RTEL1	Q9NZ71	1219 aa		12.03	□□□□□ -0.48
FXR1-222	ENST00000498658	TBX21	Q9UL17	535 aa		12.03	□□□□□ -0.48
FXR1-222	ENST00000498658	GRIN2D	O15399	1336 aa		12.03	□□□□□ -0.48
FXR1-222	ENST00000498658	MYH7B	A7E2Y1	1941 aa		12.02	□□□□□ -0.49
FXR1-222	ENST00000498658	DEXI	O95424	95 aa		12.02	□□□□□ -0.49
FXR1-222	ENST00000498658	HOXD8	P13378	290 aa	Predicted RBP	12.02	□□□□□ -0.49
FXR1-222	ENST00000498658	CLK2	P49760	499 aa	Known RBP	12.02	□□□□□ -0.49
FXR1-222	ENST00000498658	PSMC6	P62333	389 aa		12.02	□□□□□ -0.49
FXR1-222	ENST00000498658	SP2	Q02086	613 aa		12.02	□□□□□ -0.49
FXR1-222	ENST00000498658	FPGS	Q05932	587 aa		12.02	□□□□□ -0.49
FXR1-222	ENST00000498658	MTMR1	Q13613	665 aa		12.02	□□□□□ -0.49
FXR1-222	ENST00000498658	NBPF20	Q3BBV1	942 aa		12.02	□□□□□ -0.49
FXR1-222	ENST00000498658	MFSD5	Q6N075	450 aa		12.02	□□□□□ -0.49
FXR1-222	ENST00000498658	TYW1B	Q6NUM6	668 aa		12.02	□□□□□ -0.49
FXR1-222	ENST00000498658	METTL7B	Q6UX53	244 aa		12.02	□□□□□ -0.49
FXR1-222	ENST00000498658	SH3RF1	Q7Z6J0	888 aa		12.02	□□□□□ -0.49
FXR1-222	ENST00000498658	SESTD1	Q86VW0	696 aa		12.02	□□□□□ -0.49
FXR1-222	ENST00000498658	REXO1	Q8N1G1	1221 aa	Known RBP	12.02	□□□□□ -0.49
FXR1-222	ENST00000498658	TMEM199	Q8N511	208 aa		12.02	□□□□□ -0.49
FXR1-222	ENST00000498658	BAD	Q92934	168 aa		12.02	□□□□□ -0.49
FXR1-222	ENST00000498658	NCOA5	Q9HCD5	579 aa	Known RBP	12.02	□□□□□ -0.49
FXR1-222	ENST00000498658	JADE2	Q9NQC1	790 aa		12.02	□□□□□ -0.49
FXR1-222	ENST00000498658	TRIOBP	Q9H2D6	2365 aa		12.01	□□□□□ -0.49
FXR1-222	ENST00000498658	SCN10A	Q9Y5Y9	1956 aa		12.01	□□□□□ -0.49
FXR1-222	ENST00000498658	B4GALT4	O60513	344 aa		12.01	□□□□□ -0.49
FXR1-222	ENST00000498658	F2	P00734	622 aa		12.01	□□□□□ -0.49
FXR1-222	ENST00000498658	XBP1	P17861	261 aa		12.01	□□□□□ -0.49
FXR1-222	ENST00000498658	SREBF1	P36956	1147 aa		12.01	□□□□□ -0.49
FXR1-222	ENST00000498658	PKN1	Q16512	942 aa		12.01	□□□□□ -0.49
FXR1-222	ENST00000498658	HSDL1	Q3SXM5	330 aa		12.01	□□□□□ -0.49
FXR1-222	ENST00000498658	LRIT3	Q3SXY7	679 aa		12.01	□□□□□ -0.49
FXR1-222	ENST00000498658	FAM47C	Q5HY64	1035 aa		12.01	□□□□□ -0.49
FXR1-222	ENST00000498658	GALNT17	Q6IS24	598 aa		12.01	□□□□□ -0.49
FXR1-222	ENST00000498658	IL27	Q8NEV9	243 aa		12.01	□□□□□ -0.49
FXR1-222	ENST00000498658	SPOCK2	Q92563	424 aa		12.01	□□□□□ -0.49
FXR1-222	ENST00000498658	ANO3	Q9BYT9	981 aa		12.01	□□□□□ -0.49
FXR1-222	ENST00000498658	C22orf23	Q9BZE7	217 aa		12.01	□□□□□ -0.49
FXR1-222	ENST00000498658	UPF2	Q9HAU5	1272 aa	Known RBP	12.01	□□□□□ -0.49
FXR1-222	ENST00000498658	NOD1	Q9Y239	953 aa		12.01	□□□□□ -0.49
FXR1-222	ENST00000498658	UBIAD1	Q9Y5Z9	338 aa		12.01	□□□□□ -0.49
FXR1-222	ENST00000498658	LTBP2	Q14767	1821 aa		12.01	□□□□□ -0.49
FXR1-222	ENST00000498658	PFKFB2	O60825	505 aa		12	□□□□□ -0.49
FXR1-222	ENST00000498658	ITGB5	P18084	799 aa		12	□□□□□ -0.49

Retrieved 100 of 20,778 RNA–protein pairs in 21 ms