RNA–Protein interactions for RNA: ENST00000498653.5

FXN-205, Transcript of frataxin, humanhuman

TSL 1 (best) BASIC

Gene FXN, Length 856 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-205ENST00000498653 SPATC1LQ9H0A9 340 aa6.46□□□□□ -1.38
FXN-205ENST00000498653 SIL1Q9H173 461 aa6.46□□□□□ -1.38
FXN-205ENST00000498653 ZHX1Q9UKY1 873 aaPredicted RBP6.46□□□□□ -1.38
FXN-205ENST00000498653 CNPY2Q9Y2B0 182 aa6.46□□□□□ -1.38
FXN-205ENST00000498653 SUGT1Q9Y2Z0 365 aa6.46□□□□□ -1.38
FXN-205ENST00000498653 NEUROG3Q9Y4Z2 214 aa6.46□□□□□ -1.38
FXN-205ENST00000498653 SPENQ96T58 3664 aaKnown RBP6.46□□□□□ -1.38
FXN-205ENST00000498653 LRRK2Q5S007 2527 aa6.45□□□□□ -1.38
FXN-205ENST00000498653 ABHD14A-ACY1A0A1B0GW23 586 aa6.45□□□□□ -1.38
FXN-205ENST00000498653 USP17L15C9J2P7 530 aa6.45□□□□□ -1.38
FXN-205ENST00000498653 USP17L13C9JLJ4 530 aa6.45□□□□□ -1.38
FXN-205ENST00000498653 USP17L11C9JVI0 530 aa6.45□□□□□ -1.38
FXN-205ENST00000498653 USP17L18D6R9N7 530 aa6.45□□□□□ -1.38
FXN-205ENST00000498653 USP17L22D6RA61 530 aa6.45□□□□□ -1.38
FXN-205ENST00000498653 USP17L17D6RBQ6 530 aa6.45□□□□□ -1.38
FXN-205ENST00000498653 USP17L19D6RCP7 530 aa6.45□□□□□ -1.38
FXN-205ENST00000498653 USP17L20D6RJB6 530 aa6.45□□□□□ -1.38
FXN-205ENST00000498653 APAF1O14727 1248 aa6.45□□□□□ -1.38
FXN-205ENST00000498653 LGR5O75473 907 aa6.45□□□□□ -1.38
FXN-205ENST00000498653 ADH1BP00325 375 aa6.45□□□□□ -1.38
FXN-205ENST00000498653 CXCL10P02778 98 aa6.45□□□□□ -1.38
FXN-205ENST00000498653 RETP07949 1114 aa6.45□□□□□ -1.38
FXN-205ENST00000498653 DNAJB1P25685 340 aa6.45□□□□□ -1.38
FXN-205ENST00000498653 CTNNB1P35222 781 aa6.45□□□□□ -1.38
FXN-205ENST00000498653 GGCXP38435 758 aa6.45□□□□□ -1.38
FXN-205ENST00000498653 NRIP1P48552 1158 aa6.45□□□□□ -1.38
FXN-205ENST00000498653 HNRNPUQ00839 825 aaKnown RBP eCLIP6.45□□□□□ -1.38
FXN-205ENST00000498653 GUCA2AQ02747 115 aa6.45□□□□□ -1.38
FXN-205ENST00000498653 USP17L24Q0WX57 530 aa6.45□□□□□ -1.38
FXN-205ENST00000498653 NFE2L2Q16236 605 aa6.45□□□□□ -1.38
FXN-205ENST00000498653 LPAL2Q16609 132 aa6.45□□□□□ -1.38
FXN-205ENST00000498653 LAIR1Q6GTX8 287 aa6.45□□□□□ -1.38
FXN-205ENST00000498653 SNRNP48Q6IEG0 339 aaKnown RBP6.45□□□□□ -1.38
FXN-205ENST00000498653 RETREG3Q86VR2 466 aa6.45□□□□□ -1.38
FXN-205ENST00000498653 ATRIPQ8WXE1 791 aa6.45□□□□□ -1.38
FXN-205ENST00000498653 YTHDC1Q96MU7 727 aaKnown RBP6.45□□□□□ -1.38
FXN-205ENST00000498653 SPSB2Q99619 263 aa6.45□□□□□ -1.38
FXN-205ENST00000498653 USB1Q9BQ65 265 aaKnown RBP6.45□□□□□ -1.38
FXN-205ENST00000498653 POMKQ9H5K3 350 aa6.45□□□□□ -1.38
FXN-205ENST00000498653 TBC1D17Q9HA65 648 aa6.45□□□□□ -1.38
FXN-205ENST00000498653 SPC25Q9HBM1 224 aa6.45□□□□□ -1.38
FXN-205ENST00000498653 MBIPQ9NS73 344 aa6.45□□□□□ -1.38
FXN-205ENST00000498653 LIMD1Q9UGP4 676 aa6.45□□□□□ -1.38
FXN-205ENST00000498653 FBXO4Q9UKT5 387 aa6.45□□□□□ -1.38
FXN-205ENST00000498653 DUSP12Q9UNI6 340 aa6.45□□□□□ -1.38
FXN-205ENST00000498653 MSRB2Q9Y3D2 182 aa6.45□□□□□ -1.38
FXN-205ENST00000498653 PLXNA4Q9HCM2 1894 aa6.45□□□□□ -1.38
FXN-205ENST00000498653 CSMD1Q96PZ7 3565 aa6.44□□□□□ -1.38
FXN-205ENST00000498653 SPG11Q96JI7 2443 aa6.44□□□□□ -1.38
FXN-205ENST00000498653 A0A1B0GTL3 188 aa6.44□□□□□ -1.38
FXN-205ENST00000498653 NBNO60934 754 aa6.44□□□□□ -1.38
FXN-205ENST00000498653 SUPT20HL2P0C7V6 817 aa6.44□□□□□ -1.38
FXN-205ENST00000498653 PTGS1P23219 599 aa6.44□□□□□ -1.38
FXN-205ENST00000498653 TMPOP42166 694 aaKnown RBP6.44□□□□□ -1.38
FXN-205ENST00000498653 RIPK4P57078 832 aa6.44□□□□□ -1.38
FXN-205ENST00000498653 LMOD3Q0VAK6 560 aa6.44□□□□□ -1.38
FXN-205ENST00000498653 BRICD5Q6PL45 260 aa6.44□□□□□ -1.38
FXN-205ENST00000498653 ZDHHC14Q8IZN3 488 aa6.44□□□□□ -1.38
FXN-205ENST00000498653 C11orf84Q9BUA3 381 aaPredicted RBP6.44□□□□□ -1.38
FXN-205ENST00000498653 ZSCAN32Q9NX65 697 aa6.44□□□□□ -1.38
FXN-205ENST00000498653 KLK13Q9UKR3 277 aa6.44□□□□□ -1.38
FXN-205ENST00000498653 FBXL21Q9UKT6 434 aa6.44□□□□□ -1.38
FXN-205ENST00000498653 DIS3Q9Y2L1 958 aaKnown RBP6.44□□□□□ -1.38
FXN-205ENST00000498653 TLN1Q9Y490 2541 aaKnown RBP6.44□□□□□ -1.38
FXN-205ENST00000498653 UTP20O75691 2785 aaKnown RBP6.44□□□□□ -1.38
FXN-205ENST00000498653 KIAA1217Q5T5P2 1943 aa6.43□□□□□ -1.38
FXN-205ENST00000498653 WISP1O95388 367 aa6.43□□□□□ -1.38
FXN-205ENST00000498653 VCAM1P19320 739 aa6.43□□□□□ -1.38
FXN-205ENST00000498653 NOVA1P51513 510 aaKnown RBP6.43□□□□□ -1.38
FXN-205ENST00000498653 KRT24Q2M2I5 525 aa6.43□□□□□ -1.38
FXN-205ENST00000498653 LRRFIP1Q32MZ4 808 aaKnown RBP6.43□□□□□ -1.38
FXN-205ENST00000498653 CCDC144BQ3MJ40 725 aa6.43□□□□□ -1.38
FXN-205ENST00000498653 MSS51Q4VC12 460 aa6.43□□□□□ -1.38
FXN-205ENST00000498653 SYCE2Q6PIF2 218 aa6.43□□□□□ -1.38
FXN-205ENST00000498653 USP17L2Q6R6M4 530 aa6.43□□□□□ -1.38
FXN-205ENST00000498653 FBXO33Q7Z6M2 555 aa6.43□□□□□ -1.38
FXN-205ENST00000498653 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.43□□□□□ -1.38
FXN-205ENST00000498653 MROH8Q9H579 483 aa6.43□□□□□ -1.38
FXN-205ENST00000498653 PLA2G2EQ9NZK7 142 aa6.43□□□□□ -1.38
FXN-205ENST00000498653 PCDHGC3Q9UN70 934 aa6.43□□□□□ -1.38
FXN-205ENST00000498653 PCDHB15Q9Y5E8 787 aa6.43□□□□□ -1.38
FXN-205ENST00000498653 USP9YO00507 2555 aaPredicted RBP6.42□□□□□ -1.38
FXN-205ENST00000498653 C11orf97A0A1B0GVM6 126 aaPredicted RBP6.42□□□□□ -1.38
FXN-205ENST00000498653 WDR46O15213 610 aaKnown RBP6.42□□□□□ -1.38
FXN-205ENST00000498653 NARSO43776 548 aaKnown RBP6.42□□□□□ -1.38
FXN-205ENST00000498653 HYAL3O43820 417 aaPredicted RBP6.42□□□□□ -1.38
FXN-205ENST00000498653 LILRB3O75022 631 aa6.42□□□□□ -1.38
FXN-205ENST00000498653 EFCAB14O75071 495 aa6.42□□□□□ -1.38
FXN-205ENST00000498653 LRRN2O75325 713 aa6.42□□□□□ -1.38
FXN-205ENST00000498653 RB1P06400 928 aa6.42□□□□□ -1.38
FXN-205ENST00000498653 CSF1RP07333 972 aa6.42□□□□□ -1.38
FXN-205ENST00000498653 FCER1AP12319 257 aa6.42□□□□□ -1.38
FXN-205ENST00000498653 CSTF1Q05048 431 aaKnown RBP6.42□□□□□ -1.38
FXN-205ENST00000498653 PICALMQ13492 652 aa6.42□□□□□ -1.38
FXN-205ENST00000498653 KCNC3Q14003 757 aa6.42□□□□□ -1.38
FXN-205ENST00000498653 CCDC27Q2M243 656 aa6.42□□□□□ -1.38
FXN-205ENST00000498653 STPG1Q5TH74 334 aa6.42□□□□□ -1.38
FXN-205ENST00000498653 KIAA1211LQ6NV74 962 aa6.42□□□□□ -1.38
FXN-205ENST00000498653 RNF19BQ6ZMZ0 732 aa6.42□□□□□ -1.38
FXN-205ENST00000498653 RBM23Q86U06 439 aaKnown RBP6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms