RNA–Protein interactions for RNA: ENST00000498548.1

NR1H3-227, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 3

Gene NR1H3, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-227ENST00000498548 KCNV1Q6PIU1 500 aa18.55■□□□□ 0.56
NR1H3-227ENST00000498548 PPTC7Q8NI37 304 aa18.55■□□□□ 0.56
NR1H3-227ENST00000498548 EMID1Q96A84 441 aaPredicted RBP18.55■□□□□ 0.56
NR1H3-227ENST00000498548 SPATA33Q96N06 139 aa18.55■□□□□ 0.56
NR1H3-227ENST00000498548 MLXIPQ9HAP2 919 aa18.55■□□□□ 0.56
NR1H3-227ENST00000498548 FAM217BQ9NTX9 383 aaPredicted RBP18.55■□□□□ 0.56
NR1H3-227ENST00000498548 RBM28Q9NW13 759 aaKnown RBP18.55■□□□□ 0.56
NR1H3-227ENST00000498548 V9GY48 417 aaPredicted RBP18.55■□□□□ 0.56
NR1H3-227ENST00000498548 PIK3CDO00329 1044 aa18.54■□□□□ 0.56
NR1H3-227ENST00000498548 FGBP02675 491 aa18.54■□□□□ 0.56
NR1H3-227ENST00000498548 PTPN11Q06124 597 aaPredicted RBP18.54■□□□□ 0.56
NR1H3-227ENST00000498548 ZNF697Q5TEC3 545 aa18.54■□□□□ 0.56
NR1H3-227ENST00000498548 WWC2Q6AWC2 1192 aa18.54■□□□□ 0.56
NR1H3-227ENST00000498548 BLOC1S2Q6QNY1 142 aa18.54■□□□□ 0.56
NR1H3-227ENST00000498548 OTOP2Q7RTS6 562 aa18.54■□□□□ 0.56
NR1H3-227ENST00000498548 PPP4R2Q9NY27 417 aa18.54■□□□□ 0.56
NR1H3-227ENST00000498548 HDAC6Q9UBN7 1215 aa18.54■□□□□ 0.56
NR1H3-227ENST00000498548 TELO2Q9Y4R8 837 aa18.54■□□□□ 0.56
NR1H3-227ENST00000498548 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.53■□□□□ 0.56
NR1H3-227ENST00000498548 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.53■□□□□ 0.56
NR1H3-227ENST00000498548 HMGB1P09429 215 aaKnown RBP18.53■□□□□ 0.56
NR1H3-227ENST00000498548 TGFB3P10600 412 aa18.53■□□□□ 0.56
NR1H3-227ENST00000498548 ADD1P35611 737 aaKnown RBP18.53■□□□□ 0.56
NR1H3-227ENST00000498548 FUT2Q10981 343 aa18.53■□□□□ 0.56
NR1H3-227ENST00000498548 MFSD10Q14728 455 aa18.53■□□□□ 0.56
NR1H3-227ENST00000498548 PTGISQ16647 500 aa18.53■□□□□ 0.56
NR1H3-227ENST00000498548 TYW1BQ6NUM6 668 aa18.53■□□□□ 0.56
NR1H3-227ENST00000498548 DEFB128Q7Z7B8 93 aa18.53■□□□□ 0.56
NR1H3-227ENST00000498548 BRF1Q92994 677 aa18.53■□□□□ 0.56
NR1H3-227ENST00000498548 VWCEQ96DN2 955 aa18.53■□□□□ 0.56
NR1H3-227ENST00000498548 GUCD1Q96NT3 240 aa18.53■□□□□ 0.56
NR1H3-227ENST00000498548 SEMA6BQ9H3T3 888 aa18.53■□□□□ 0.56
NR1H3-227ENST00000498548 CXXC1Q9P0U4 656 aaPredicted RBP18.53■□□□□ 0.56
NR1H3-227ENST00000498548 NOD1Q9Y239 953 aa18.53■□□□□ 0.56
NR1H3-227ENST00000498548 SPATA31C2B4DYI2 1134 aa18.52■□□□□ 0.56
NR1H3-227ENST00000498548 REC8O95072 547 aa18.52■□□□□ 0.56
NR1H3-227ENST00000498548 ICAM3P32942 547 aa18.52■□□□□ 0.56
NR1H3-227ENST00000498548 ZNF200P98182 395 aaPredicted RBP18.52■□□□□ 0.56
NR1H3-227ENST00000498548 KIAA0753Q2KHM9 967 aa18.52■□□□□ 0.56
NR1H3-227ENST00000498548 GNPTABQ3T906 1256 aa18.52■□□□□ 0.56
NR1H3-227ENST00000498548 PCNX4Q63HM2 1172 aa18.52■□□□□ 0.56
NR1H3-227ENST00000498548 PSRC1Q6PGN9 363 aaPredicted RBP18.52■□□□□ 0.56
NR1H3-227ENST00000498548 CYFIP1Q7L576 1253 aa18.52■□□□□ 0.56
NR1H3-227ENST00000498548 PGBD1Q96JS3 809 aa18.52■□□□□ 0.56
NR1H3-227ENST00000498548 INPP4AQ96PE3 977 aaPredicted RBP18.52■□□□□ 0.56
NR1H3-227ENST00000498548 CTAGE1Q96RT6 745 aa18.52■□□□□ 0.56
NR1H3-227ENST00000498548 TTYH1Q9H313 450 aaPredicted RBP18.52■□□□□ 0.56
NR1H3-227ENST00000498548 PCDHA6Q9UN73 950 aa18.52■□□□□ 0.56
NR1H3-227ENST00000498548 PCDHA8Q9Y5H6 950 aa18.52■□□□□ 0.56
NR1H3-227ENST00000498548 HAS3O00219 553 aa18.51■□□□□ 0.55
NR1H3-227ENST00000498548 RPS6KB1P23443 525 aa18.51■□□□□ 0.55
NR1H3-227ENST00000498548 PBX2P40425 430 aa18.51■□□□□ 0.55
NR1H3-227ENST00000498548 NAPAP54920 295 aa18.51■□□□□ 0.55
NR1H3-227ENST00000498548 SP4Q02446 784 aa18.51■□□□□ 0.55
NR1H3-227ENST00000498548 RASIP1Q5U651 963 aa18.51■□□□□ 0.55
NR1H3-227ENST00000498548 C7orf31Q8N865 590 aa18.51■□□□□ 0.55
NR1H3-227ENST00000498548 RETREG2Q8NC44 543 aa18.51■□□□□ 0.55
NR1H3-227ENST00000498548 HERVK_113Q902F9 699 aa18.51■□□□□ 0.55
NR1H3-227ENST00000498548 FIBPO43427 364 aa18.5■□□□□ 0.55
NR1H3-227ENST00000498548 PPFIA3O75145 1194 aa18.5■□□□□ 0.55
NR1H3-227ENST00000498548 PPFIA4O75335 1185 aa18.5■□□□□ 0.55
NR1H3-227ENST00000498548 STAM2O75886 525 aa18.5■□□□□ 0.55
NR1H3-227ENST00000498548 F2P00734 622 aa18.5■□□□□ 0.55
NR1H3-227ENST00000498548 METAP2P50579 478 aaKnown RBP eCLIP18.5■□□□□ 0.55
NR1H3-227ENST00000498548 HIC1Q14526 733 aa18.5■□□□□ 0.55
NR1H3-227ENST00000498548 SESTD1Q86VW0 696 aa18.5■□□□□ 0.55
NR1H3-227ENST00000498548 RPUSD2Q8IZ73 545 aaKnown RBP18.5■□□□□ 0.55
NR1H3-227ENST00000498548 C16orf70Q9BSU1 422 aa18.5■□□□□ 0.55
NR1H3-227ENST00000498548 KATNAL1Q9BW62 490 aa18.5■□□□□ 0.55
NR1H3-227ENST00000498548 GTF2IRD1Q9UHL9 959 aa18.5■□□□□ 0.55
NR1H3-227ENST00000498548 SPDYE3A6NKU9 549 aa18.49■□□□□ 0.55
NR1H3-227ENST00000498548 STXBP3O00186 592 aa18.49■□□□□ 0.55
NR1H3-227ENST00000498548 ATP9AO75110 1047 aa18.49■□□□□ 0.55
NR1H3-227ENST00000498548 IQCF3P0C7M6 154 aa18.49■□□□□ 0.55
NR1H3-227ENST00000498548 HOXD8P13378 290 aaPredicted RBP18.49■□□□□ 0.55
NR1H3-227ENST00000498548 NEDD9Q14511 834 aa18.49■□□□□ 0.55
NR1H3-227ENST00000498548 UTP14CQ5TAP6 766 aaKnown RBP18.49■□□□□ 0.55
NR1H3-227ENST00000498548 NLRX1Q86UT6 975 aa18.49■□□□□ 0.55
NR1H3-227ENST00000498548 DHX38Q92620 1227 aaKnown RBP18.49■□□□□ 0.55
NR1H3-227ENST00000498548 USP26Q9BXU7 913 aa18.49■□□□□ 0.55
NR1H3-227ENST00000498548 TMEM260Q9NX78 707 aa18.49■□□□□ 0.55
NR1H3-227ENST00000498548 PKD2L1Q9P0L9 805 aa18.49■□□□□ 0.55
NR1H3-227ENST00000498548 STXBP5LQ9Y2K9 1186 aa18.49■□□□□ 0.55
NR1H3-227ENST00000498548 GBF1Q92538 1859 aa18.49■□□□□ 0.55
NR1H3-227ENST00000498548 LAMA2P24043 3122 aaKnown RBP18.49■□□□□ 0.55
NR1H3-227ENST00000498548 SMCO2A6NFE2 343 aa18.48■□□□□ 0.55
NR1H3-227ENST00000498548 ZBBXA8MT70 800 aa18.48■□□□□ 0.55
NR1H3-227ENST00000498548 NOP56O00567 594 aaKnown RBP18.48■□□□□ 0.55
NR1H3-227ENST00000498548 LGALS2P05162 132 aa18.48■□□□□ 0.55
NR1H3-227ENST00000498548 ITGB5P18084 799 aa18.48■□□□□ 0.55
NR1H3-227ENST00000498548 DNAJB2P25686 324 aa18.48■□□□□ 0.55
NR1H3-227ENST00000498548 PSMA5P28066 241 aa18.48■□□□□ 0.55
NR1H3-227ENST00000498548 BFSP2Q13515 415 aa18.48■□□□□ 0.55
NR1H3-227ENST00000498548 XRRA1Q6P2D8 792 aa18.48■□□□□ 0.55
NR1H3-227ENST00000498548 TET1Q8NFU7 2136 aa18.48■□□□□ 0.55
NR1H3-227ENST00000498548 CDX2Q99626 313 aaPredicted RBP18.48■□□□□ 0.55
NR1H3-227ENST00000498548 GPR20Q99678 358 aa18.48■□□□□ 0.55
NR1H3-227ENST00000498548 LARP6Q9BRS8 491 aaKnown RBP18.48■□□□□ 0.55
NR1H3-227ENST00000498548 PBX4Q9BYU1 374 aa18.48■□□□□ 0.55
NR1H3-227ENST00000498548 RIC8AQ9NPQ8 531 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms