RNA–Protein interactions for RNA: ENST00000498540.2

TRAF4-212, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 748 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-212ENST00000498540 LGR5O75473 907 aa17.15■□□□□ 0.34
TRAF4-212ENST00000498540 RGS20O76081 388 aa17.15■□□□□ 0.34
TRAF4-212ENST00000498540 CFBP00751 764 aa17.15■□□□□ 0.34
TRAF4-212ENST00000498540 HOXD8P13378 290 aaPredicted RBP17.15■□□□□ 0.34
TRAF4-212ENST00000498540 KCNA5P22460 613 aa17.15■□□□□ 0.34
TRAF4-212ENST00000498540 MKRN4PQ13434 485 aaPredicted RBP17.15■□□□□ 0.34
TRAF4-212ENST00000498540 LAMC2Q13753 1193 aa17.15■□□□□ 0.34
TRAF4-212ENST00000498540 IQCA1Q86XH1 822 aa17.15■□□□□ 0.34
TRAF4-212ENST00000498540 DHX37Q8IY37 1157 aaKnown RBP17.15■□□□□ 0.34
TRAF4-212ENST00000498540 ENAHQ8N8S7 591 aaPredicted RBP17.15■□□□□ 0.34
TRAF4-212ENST00000498540 ANKS1AQ92625 1134 aa17.15■□□□□ 0.34
TRAF4-212ENST00000498540 RILPL2Q969X0 211 aa17.15■□□□□ 0.34
TRAF4-212ENST00000498540 CRBNQ96SW2 442 aa17.15■□□□□ 0.34
TRAF4-212ENST00000498540 VAT1LQ9HCJ6 419 aa17.15■□□□□ 0.34
TRAF4-212ENST00000498540 PARP1P09874 1014 aaKnown RBP17.14■□□□□ 0.33
TRAF4-212ENST00000498540 HSD17B4P51659 736 aa17.14■□□□□ 0.33
TRAF4-212ENST00000498540 HSDL1Q3SXM5 330 aa17.14■□□□□ 0.33
TRAF4-212ENST00000498540 LEXMQ3ZCV2 418 aa17.14■□□□□ 0.33
TRAF4-212ENST00000498540 FBXO22Q8NEZ5 403 aa17.14■□□□□ 0.33
TRAF4-212ENST00000498540 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.14■□□□□ 0.33
TRAF4-212ENST00000498540 ZSCAN10Q96SZ4 725 aaPredicted RBP17.14■□□□□ 0.33
TRAF4-212ENST00000498540 INSL6Q9Y581 213 aa17.14■□□□□ 0.33
TRAF4-212ENST00000498540 NLRC5Q86WI3 1866 aa17.14■□□□□ 0.33
TRAF4-212ENST00000498540 MYCLP12524 364 aaPredicted RBP17.13■□□□□ 0.33
TRAF4-212ENST00000498540 IL9P15248 144 aa17.13■□□□□ 0.33
TRAF4-212ENST00000498540 SDSP20132 328 aa17.13■□□□□ 0.33
TRAF4-212ENST00000498540 MFAP1P55081 439 aaKnown RBP17.13■□□□□ 0.33
TRAF4-212ENST00000498540 CCDC178Q5BJE1 867 aa17.13■□□□□ 0.33
TRAF4-212ENST00000498540 MYSM1Q5VVJ2 828 aa17.13■□□□□ 0.33
TRAF4-212ENST00000498540 SERINC5Q86VE9 423 aa17.13■□□□□ 0.33
TRAF4-212ENST00000498540 FAM178BQ8IXR5 827 aa17.13■□□□□ 0.33
TRAF4-212ENST00000498540 MYOCDQ8IZQ8 938 aa17.13■□□□□ 0.33
TRAF4-212ENST00000498540 STAG2Q8N3U4 1231 aa17.13■□□□□ 0.33
TRAF4-212ENST00000498540 DBF4BQ8NFT6 615 aa17.13■□□□□ 0.33
TRAF4-212ENST00000498540 IL31RAQ8NI17 732 aa17.13■□□□□ 0.33
TRAF4-212ENST00000498540 PDCD2LQ9BRP1 358 aa17.13■□□□□ 0.33
TRAF4-212ENST00000498540 LNPKQ9C0E8 428 aa17.13■□□□□ 0.33
TRAF4-212ENST00000498540 EMSYQ7Z589 1322 aa17.13■□□□□ 0.33
TRAF4-212ENST00000498540 PPP1R11O60927 126 aaPredicted RBP17.12■□□□□ 0.33
TRAF4-212ENST00000498540 GGPS1O95749 300 aa17.12■□□□□ 0.33
TRAF4-212ENST00000498540 AMHP03971 560 aa17.12■□□□□ 0.33
TRAF4-212ENST00000498540 THPOP40225 353 aa17.12■□□□□ 0.33
TRAF4-212ENST00000498540 HTRA4P83105 476 aaPredicted RBP17.12■□□□□ 0.33
TRAF4-212ENST00000498540 SP2Q02086 613 aa17.12■□□□□ 0.33
TRAF4-212ENST00000498540 GHRHRQ02643 423 aa17.12■□□□□ 0.33
TRAF4-212ENST00000498540 HDAC1Q13547 482 aaPredicted RBP17.12■□□□□ 0.33
TRAF4-212ENST00000498540 CELF3Q5SZQ8 465 aaKnown RBP17.12■□□□□ 0.33
TRAF4-212ENST00000498540 GJD3Q8N144 294 aa17.12■□□□□ 0.33
TRAF4-212ENST00000498540 SP7Q8TDD2 431 aaPredicted RBP17.12■□□□□ 0.33
TRAF4-212ENST00000498540 GPKOWQ92917 476 aaPredicted RBP eCLIP17.12■□□□□ 0.33
TRAF4-212ENST00000498540 SPATA33Q96N06 139 aa17.12■□□□□ 0.33
TRAF4-212ENST00000498540 C16orf70Q9BSU1 422 aa17.12■□□□□ 0.33
TRAF4-212ENST00000498540 AMNQ9BXJ7 453 aa17.12■□□□□ 0.33
TRAF4-212ENST00000498540 ZSWIM5Q9P217 1185 aa17.12■□□□□ 0.33
TRAF4-212ENST00000498540 MUC6Q6W4X9 2439 aa17.12■□□□□ 0.33
TRAF4-212ENST00000498540 ATG2AQ2TAZ0 1938 aa17.11■□□□□ 0.33
TRAF4-212ENST00000498540 RSPH10B2B2RC85 870 aa17.11■□□□□ 0.33
TRAF4-212ENST00000498540 PPFIA4O75335 1185 aa17.11■□□□□ 0.33
TRAF4-212ENST00000498540 RSPH10BP0C881 870 aa17.11■□□□□ 0.33
TRAF4-212ENST00000498540 UBA1P22314 1058 aaKnown RBP17.11■□□□□ 0.33
TRAF4-212ENST00000498540 HOXA13P31271 388 aaPredicted RBP17.11■□□□□ 0.33
TRAF4-212ENST00000498540 NT5C2P49902 561 aa17.11■□□□□ 0.33
TRAF4-212ENST00000498540 RRP1P56182 461 aaKnown RBP17.11■□□□□ 0.33
TRAF4-212ENST00000498540 PGM5Q15124 567 aa17.11■□□□□ 0.33
TRAF4-212ENST00000498540 PLEKHG4Q58EX7 1191 aa17.11■□□□□ 0.33
TRAF4-212ENST00000498540 PTCRAQ6ISU1 281 aaPredicted RBP17.11■□□□□ 0.33
TRAF4-212ENST00000498540 MRPL38Q96DV4 380 aaKnown RBP17.11■□□□□ 0.33
TRAF4-212ENST00000498540 ZFP91Q96JP5 570 aaPredicted RBP17.11■□□□□ 0.33
TRAF4-212ENST00000498540 OSBPL7Q9BZF2 842 aa17.11■□□□□ 0.33
TRAF4-212ENST00000498540 DOCK5Q9H7D0 1870 aa17.11■□□□□ 0.33
TRAF4-212ENST00000498540 HOXC8P31273 242 aa17.1■□□□□ 0.33
TRAF4-212ENST00000498540 SSTR3P32745 418 aaPredicted RBP17.1■□□□□ 0.33
TRAF4-212ENST00000498540 EPC2Q52LR7 807 aa17.1■□□□□ 0.33
TRAF4-212ENST00000498540 CWC27Q6UX04 472 aaKnown RBP17.1■□□□□ 0.33
TRAF4-212ENST00000498540 STOX1Q6ZVD7 989 aa17.1■□□□□ 0.33
TRAF4-212ENST00000498540 VSIG10LQ86VR7 867 aa17.1■□□□□ 0.33
TRAF4-212ENST00000498540 MTMR8Q96EF0 704 aa17.1■□□□□ 0.33
TRAF4-212ENST00000498540 COL4A6Q14031 1691 aa17.1■□□□□ 0.33
TRAF4-212ENST00000498540 RALGAPA2Q2PPJ7 1873 aa17.1■□□□□ 0.33
TRAF4-212ENST00000498540 C17orf102A2RUQ5 167 aa17.09■□□□□ 0.33
TRAF4-212ENST00000498540 H3BQ06 376 aaPredicted RBP17.09■□□□□ 0.33
TRAF4-212ENST00000498540 KCNV1Q6PIU1 500 aa17.09■□□□□ 0.33
TRAF4-212ENST00000498540 NEK9Q8TD19 979 aa17.09■□□□□ 0.33
TRAF4-212ENST00000498540 ATP6V0A1Q93050 837 aa17.09■□□□□ 0.33
TRAF4-212ENST00000498540 BCAS3Q9H6U6 928 aa17.09■□□□□ 0.33
TRAF4-212ENST00000498540 PCDHA1Q9Y5I3 950 aa17.09■□□□□ 0.33
TRAF4-212ENST00000498540 GRXCR2A6NFK2 248 aa17.08■□□□□ 0.32
TRAF4-212ENST00000498540 PRR33A8MZF0 331 aa17.08■□□□□ 0.32
TRAF4-212ENST00000498540 KLRF2D3W0D1 207 aa17.08■□□□□ 0.32
TRAF4-212ENST00000498540 H3BRB1 525 aa17.08■□□□□ 0.32
TRAF4-212ENST00000498540 ZBTB5O15062 677 aa17.08■□□□□ 0.32
TRAF4-212ENST00000498540 TREHO43280 583 aa17.08■□□□□ 0.32
TRAF4-212ENST00000498540 LGALS2P05162 132 aa17.08■□□□□ 0.32
TRAF4-212ENST00000498540 CTSHP09668 335 aa17.08■□□□□ 0.32
TRAF4-212ENST00000498540 SMIM10L2AP0DMW4 78 aa17.08■□□□□ 0.32
TRAF4-212ENST00000498540 SMIM10L2BP0DMW5 78 aa17.08■□□□□ 0.32
TRAF4-212ENST00000498540 SLC35G1Q2M3R5 365 aa17.08■□□□□ 0.32
TRAF4-212ENST00000498540 YME1L1Q96TA2 773 aa17.08■□□□□ 0.32
TRAF4-212ENST00000498540 UBAC1Q9BSL1 405 aa17.08■□□□□ 0.32
TRAF4-212ENST00000498540 TUT1Q9H6E5 874 aaKnown RBP17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms