RNA–Protein interactions for RNA: ENST00000498466.1

CCDC58-207, Transcript of coiled-coil domain containing 58, humanhuman

TSL 2

Gene CCDC58, Length 683 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-207ENST00000498466 HAS3O00219 553 aa16.28■□□□□ 0.2
CCDC58-207ENST00000498466 DHX16O60231 1041 aaKnown RBP16.28■□□□□ 0.2
CCDC58-207ENST00000498466 THPOP40225 353 aa16.28■□□□□ 0.2
CCDC58-207ENST00000498466 EP400NLQ6ZTU2 488 aa16.28■□□□□ 0.2
CCDC58-207ENST00000498466 TBC1D10CQ8IV04 446 aa16.28■□□□□ 0.2
CCDC58-207ENST00000498466 ADGRF4Q8IZF3 695 aa16.28■□□□□ 0.2
CCDC58-207ENST00000498466 DBF4BQ8NFT6 615 aa16.28■□□□□ 0.2
CCDC58-207ENST00000498466 ESR2Q92731 530 aa16.28■□□□□ 0.2
CCDC58-207ENST00000498466 RNF41Q9H4P4 317 aaPredicted RBP16.28■□□□□ 0.2
CCDC58-207ENST00000498466 MRPL11Q9Y3B7 192 aaKnown RBP16.28■□□□□ 0.2
CCDC58-207ENST00000498466 WDFY4Q6ZS81 3184 aa16.28■□□□□ 0.2
CCDC58-207ENST00000498466 SIP14410 1827 aa16.27■□□□□ 0.2
CCDC58-207ENST00000498466 RSPH10B2B2RC85 870 aa16.27■□□□□ 0.2
CCDC58-207ENST00000498466 SORBS3O60504 671 aa16.27■□□□□ 0.2
CCDC58-207ENST00000498466 NR3C2P08235 984 aa16.27■□□□□ 0.2
CCDC58-207ENST00000498466 RSPH10BP0C881 870 aa16.27■□□□□ 0.2
CCDC58-207ENST00000498466 HTRA4P83105 476 aaPredicted RBP16.27■□□□□ 0.2
CCDC58-207ENST00000498466 QRICH1Q2TAL8 776 aa16.27■□□□□ 0.2
CCDC58-207ENST00000498466 EPC2Q52LR7 807 aa16.27■□□□□ 0.2
CCDC58-207ENST00000498466 TIGD5Q53EQ6 642 aa16.27■□□□□ 0.2
CCDC58-207ENST00000498466 ZNF589Q86UQ0 364 aaPredicted RBP16.27■□□□□ 0.2
CCDC58-207ENST00000498466 FBXO11Q86XK2 927 aa16.27■□□□□ 0.2
CCDC58-207ENST00000498466 DGKHQ86XP1 1220 aa16.27■□□□□ 0.2
CCDC58-207ENST00000498466 PNMA1Q8ND90 353 aa16.27■□□□□ 0.2
CCDC58-207ENST00000498466 BANK1Q8NDB2 785 aa16.27■□□□□ 0.2
CCDC58-207ENST00000498466 NEK9Q8TD19 979 aa16.27■□□□□ 0.2
CCDC58-207ENST00000498466 SAMD11Q96NU1 681 aa16.27■□□□□ 0.2
CCDC58-207ENST00000498466 YME1L1Q96TA2 773 aa16.27■□□□□ 0.2
CCDC58-207ENST00000498466 PXMP2Q9NR77 195 aa16.27■□□□□ 0.2
CCDC58-207ENST00000498466 NEDD4P46934 1319 aa16.26■□□□□ 0.19
CCDC58-207ENST00000498466 DCXO43602 365 aa16.26■□□□□ 0.19
CCDC58-207ENST00000498466 CFBP00751 764 aa16.26■□□□□ 0.19
CCDC58-207ENST00000498466 HIC1Q14526 733 aa16.26■□□□□ 0.19
CCDC58-207ENST00000498466 ANKRD45Q5TZF3 282 aa16.26■□□□□ 0.19
CCDC58-207ENST00000498466 SP7Q8TDD2 431 aaPredicted RBP16.26■□□□□ 0.19
CCDC58-207ENST00000498466 SPATA33Q96N06 139 aa16.26■□□□□ 0.19
CCDC58-207ENST00000498466 KAT14Q9H8E8 782 aa16.26■□□□□ 0.19
CCDC58-207ENST00000498466 VAT1LQ9HCJ6 419 aa16.26■□□□□ 0.19
CCDC58-207ENST00000498466 FAM50BQ9Y247 325 aa16.26■□□□□ 0.19
CCDC58-207ENST00000498466 CCDC171Q6TFL3 1326 aa16.25■□□□□ 0.19
CCDC58-207ENST00000498466 PPFIA4O75335 1185 aa16.25■□□□□ 0.19
CCDC58-207ENST00000498466 UPP2O95045 317 aa16.25■□□□□ 0.19
CCDC58-207ENST00000498466 MYCLP12524 364 aaPredicted RBP16.25■□□□□ 0.19
CCDC58-207ENST00000498466 NMIQ13287 307 aaPredicted RBP16.25■□□□□ 0.19
CCDC58-207ENST00000498466 MKRN4PQ13434 485 aaPredicted RBP16.25■□□□□ 0.19
CCDC58-207ENST00000498466 GPM6BQ13491 265 aa16.25■□□□□ 0.19
CCDC58-207ENST00000498466 HSDL1Q3SXM5 330 aa16.25■□□□□ 0.19
CCDC58-207ENST00000498466 ASPRV1Q53RT3 343 aa16.25■□□□□ 0.19
CCDC58-207ENST00000498466 PLEKHG4Q58EX7 1191 aa16.25■□□□□ 0.19
CCDC58-207ENST00000498466 TCEAL5Q5H9L2 206 aa16.25■□□□□ 0.19
CCDC58-207ENST00000498466 MYSM1Q5VVJ2 828 aa16.25■□□□□ 0.19
CCDC58-207ENST00000498466 DIEXFQ68CQ4 756 aaKnown RBP16.25■□□□□ 0.19
CCDC58-207ENST00000498466 SERINC5Q86VE9 423 aa16.25■□□□□ 0.19
CCDC58-207ENST00000498466 IQCA1Q86XH1 822 aa16.25■□□□□ 0.19
CCDC58-207ENST00000498466 BRWD1Q9NSI6 2320 aa16.25■□□□□ 0.19
CCDC58-207ENST00000498466 MUC6Q6W4X9 2439 aa16.25■□□□□ 0.19
CCDC58-207ENST00000498466 C17orf102A2RUQ5 167 aa16.24■□□□□ 0.19
CCDC58-207ENST00000498466 H3BNC9 293 aa16.24■□□□□ 0.19
CCDC58-207ENST00000498466 ZNF213O14771 459 aa16.24■□□□□ 0.19
CCDC58-207ENST00000498466 GGPS1O95749 300 aa16.24■□□□□ 0.19
CCDC58-207ENST00000498466 HOXD8P13378 290 aaPredicted RBP16.24■□□□□ 0.19
CCDC58-207ENST00000498466 MRE11P49959 708 aa16.24■□□□□ 0.19
CCDC58-207ENST00000498466 PDE1AP54750 535 aa16.24■□□□□ 0.19
CCDC58-207ENST00000498466 CCDC178Q5BJE1 867 aa16.24■□□□□ 0.19
CCDC58-207ENST00000498466 CELF3Q5SZQ8 465 aaKnown RBP16.24■□□□□ 0.19
CCDC58-207ENST00000498466 KCNV1Q6PIU1 500 aa16.24■□□□□ 0.19
CCDC58-207ENST00000498466 SEPT8Q92599 483 aa16.24■□□□□ 0.19
CCDC58-207ENST00000498466 ATP6V0A1Q93050 837 aa16.24■□□□□ 0.19
CCDC58-207ENST00000498466 PABPC5Q96DU9 382 aaKnown RBP16.24■□□□□ 0.19
CCDC58-207ENST00000498466 KDM4AO75164 1064 aa16.23■□□□□ 0.19
CCDC58-207ENST00000498466 PARP1P09874 1014 aaKnown RBP16.23■□□□□ 0.19
CCDC58-207ENST00000498466 TMEM192Q8IY95 271 aa16.23■□□□□ 0.19
CCDC58-207ENST00000498466 TOP1MTQ969P6 601 aa16.23■□□□□ 0.19
CCDC58-207ENST00000498466 PDCD2LQ9BRP1 358 aa16.23■□□□□ 0.19
CCDC58-207ENST00000498466 NSUN3Q9H649 340 aaKnown RBP16.23■□□□□ 0.19
CCDC58-207ENST00000498466 JMJD4Q9H9V9 463 aa16.23■□□□□ 0.19
CCDC58-207ENST00000498466 CLDND1Q9NY35 253 aa16.23■□□□□ 0.19
CCDC58-207ENST00000498466 KIAA1217Q5T5P2 1943 aa16.22■□□□□ 0.19
CCDC58-207ENST00000498466 POTEB3A0JP26 581 aa16.22■□□□□ 0.19
CCDC58-207ENST00000498466 TRIM6-TRIM34B2RNG4 842 aa16.22■□□□□ 0.19
CCDC58-207ENST00000498466 RGS20O76081 388 aa16.22■□□□□ 0.19
CCDC58-207ENST00000498466 CTSHP09668 335 aa16.22■□□□□ 0.19
CCDC58-207ENST00000498466 HSD17B4P51659 736 aa16.22■□□□□ 0.19
CCDC58-207ENST00000498466 MFAP1P55081 439 aaKnown RBP16.22■□□□□ 0.19
CCDC58-207ENST00000498466 NHLH1Q02575 133 aa16.22■□□□□ 0.19
CCDC58-207ENST00000498466 ZP2Q05996 745 aa16.22■□□□□ 0.19
CCDC58-207ENST00000498466 POTEBQ6S5H4 581 aa16.22■□□□□ 0.19
CCDC58-207ENST00000498466 TICAM2Q86XR7 235 aa16.22■□□□□ 0.19
CCDC58-207ENST00000498466 ZSCAN10Q96SZ4 725 aaPredicted RBP16.22■□□□□ 0.19
CCDC58-207ENST00000498466 C16orf70Q9BSU1 422 aa16.22■□□□□ 0.19
CCDC58-207ENST00000498466 AMNQ9BXJ7 453 aa16.22■□□□□ 0.19
CCDC58-207ENST00000498466 IFIH1Q9BYX4 1025 aaKnown RBP16.22■□□□□ 0.19
CCDC58-207ENST00000498466 MLXIPQ9HAP2 919 aa16.22■□□□□ 0.19
CCDC58-207ENST00000498466 PRKAG3Q9UGI9 489 aa16.22■□□□□ 0.19
CCDC58-207ENST00000498466 PIEZO1Q92508 2521 aa16.22■□□□□ 0.19
CCDC58-207ENST00000498466 C5orf42Q9H799 3197 aa16.21■□□□□ 0.19
CCDC58-207ENST00000498466 H3BRB1 525 aa16.21■□□□□ 0.19
CCDC58-207ENST00000498466 TREHO43280 583 aa16.21■□□□□ 0.19
CCDC58-207ENST00000498466 SMIM10L2AP0DMW4 78 aa16.21■□□□□ 0.19
CCDC58-207ENST00000498466 SMIM10L2BP0DMW5 78 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms