RNA–Protein interactions for RNA: ENST00000498367.1

PDCD4-211, Transcript of programmed cell death 4, humanhuman

TSL 3

Gene PDCD4, Length 975 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-211ENST00000498367 SRGAP1Q7Z6B7 1085 aa8.16□□□□□ -1.1
PDCD4-211ENST00000498367 EPHX4Q8IUS5 362 aa8.16□□□□□ -1.1
PDCD4-211ENST00000498367 LRRC49Q8IUZ0 686 aa8.16□□□□□ -1.1
PDCD4-211ENST00000498367 MYCT1Q8N699 235 aa8.16□□□□□ -1.1
PDCD4-211ENST00000498367 GOLGA6L1Q8N7Z2 621 aa8.16□□□□□ -1.1
PDCD4-211ENST00000498367 DRAXINQ8NBI3 349 aaPredicted RBP8.16□□□□□ -1.1
PDCD4-211ENST00000498367 SLC30A5Q8TAD4 765 aa8.16□□□□□ -1.1
PDCD4-211ENST00000498367 DEPTORQ8TB45 409 aa8.16□□□□□ -1.1
PDCD4-211ENST00000498367 FBXO30Q8TB52 745 aa8.16□□□□□ -1.1
PDCD4-211ENST00000498367 NEK9Q8TD19 979 aa8.16□□□□□ -1.1
PDCD4-211ENST00000498367 NKD1Q969G9 470 aa8.16□□□□□ -1.1
PDCD4-211ENST00000498367 BICD1Q96G01 975 aa8.16□□□□□ -1.1
PDCD4-211ENST00000498367 SGCZQ96LD1 299 aa8.16□□□□□ -1.1
PDCD4-211ENST00000498367 ASB2Q96Q27 587 aa8.16□□□□□ -1.1
PDCD4-211ENST00000498367 NUP88Q99567 741 aaPredicted RBP8.16□□□□□ -1.1
PDCD4-211ENST00000498367 TTC1Q99614 292 aa8.16□□□□□ -1.1
PDCD4-211ENST00000498367 C7orf25Q9BPX7 421 aa8.16□□□□□ -1.1
PDCD4-211ENST00000498367 DHRS4Q9BTZ2 278 aa8.16□□□□□ -1.1
PDCD4-211ENST00000498367 EHMT1Q9H9B1 1298 aa8.16□□□□□ -1.1
PDCD4-211ENST00000498367 EFCC1Q9HA90 598 aa8.16□□□□□ -1.1
PDCD4-211ENST00000498367 ZNF304Q9HCX3 659 aa8.16□□□□□ -1.1
PDCD4-211ENST00000498367 SH3BGRL2Q9UJC5 107 aa8.16□□□□□ -1.1
PDCD4-211ENST00000498367 ZHX1Q9UKY1 873 aaPredicted RBP8.16□□□□□ -1.1
PDCD4-211ENST00000498367 ZBTB21Q9ULJ3 1066 aa8.16□□□□□ -1.1
PDCD4-211ENST00000498367 GPR34Q9UPC5 381 aa8.16□□□□□ -1.1
PDCD4-211ENST00000498367 KIF16BQ96L93 1317 aa8.15□□□□□ -1.1
PDCD4-211ENST00000498367 HNRNPCL2B2RXH8 293 aa8.15□□□□□ -1.1
PDCD4-211ENST00000498367 RASA4BC9J798 803 aa8.15□□□□□ -1.1
PDCD4-211ENST00000498367 HNRNPCL1O60812 293 aaKnown RBP8.15□□□□□ -1.1
PDCD4-211ENST00000498367 PPFIA2O75334 1257 aa8.15□□□□□ -1.1
PDCD4-211ENST00000498367 KRT38O76015 456 aa8.15□□□□□ -1.1
PDCD4-211ENST00000498367 USP1O94782 785 aa8.15□□□□□ -1.1
PDCD4-211ENST00000498367 MT-ND3P03897 115 aa8.15□□□□□ -1.1
PDCD4-211ENST00000498367 MMEP08473 750 aa8.15□□□□□ -1.1
PDCD4-211ENST00000498367 RHOXF2BP0C7M4 288 aa8.15□□□□□ -1.1
PDCD4-211ENST00000498367 HSPA6P17066 643 aa8.15□□□□□ -1.1
PDCD4-211ENST00000498367 PSMC4P43686 418 aa8.15□□□□□ -1.1
PDCD4-211ENST00000498367 PHKA1P46020 1223 aa8.15□□□□□ -1.1
PDCD4-211ENST00000498367 NPTX2P47972 431 aa8.15□□□□□ -1.1
PDCD4-211ENST00000498367 RNF144AP50876 292 aaPredicted RBP8.15□□□□□ -1.1
PDCD4-211ENST00000498367 RAB15P59190 212 aa8.15□□□□□ -1.1
PDCD4-211ENST00000498367 PPP2R3AQ06190 1150 aa8.15□□□□□ -1.1
PDCD4-211ENST00000498367 CDC16Q13042 620 aa8.15□□□□□ -1.1
PDCD4-211ENST00000498367 USP4Q13107 963 aa8.15□□□□□ -1.1
PDCD4-211ENST00000498367 ORC1Q13415 861 aa8.15□□□□□ -1.1
PDCD4-211ENST00000498367 PDE3AQ14432 1141 aa8.15□□□□□ -1.1
PDCD4-211ENST00000498367 RASA2Q15283 850 aa8.15□□□□□ -1.1
PDCD4-211ENST00000498367 OASLQ15646 514 aaKnown RBP8.15□□□□□ -1.1
PDCD4-211ENST00000498367 TMEM240Q5SV17 173 aa8.15□□□□□ -1.1
PDCD4-211ENST00000498367 CCDC30Q5VVM6 783 aa8.15□□□□□ -1.1
PDCD4-211ENST00000498367 ANGPTL8Q6UXH0 198 aa8.15□□□□□ -1.1
PDCD4-211ENST00000498367 CCDC149Q6ZUS6 474 aa8.15□□□□□ -1.1
PDCD4-211ENST00000498367 CHST15Q7LFX5 561 aaPredicted RBP8.15□□□□□ -1.1
PDCD4-211ENST00000498367 GALNTL5Q7Z4T8 443 aa8.15□□□□□ -1.1
PDCD4-211ENST00000498367 SLC9B2Q86UD5 537 aa8.15□□□□□ -1.1
PDCD4-211ENST00000498367 LRRC47Q8N1G4 583 aaKnown RBP8.15□□□□□ -1.1
PDCD4-211ENST00000498367 FAM169BQ8N8A8 192 aa8.15□□□□□ -1.1
PDCD4-211ENST00000498367 ZBTB38Q8NAP3 1195 aaPredicted RBP8.15□□□□□ -1.1
PDCD4-211ENST00000498367 PCYOX1LQ8NBM8 494 aa8.15□□□□□ -1.1
PDCD4-211ENST00000498367 OR52K2Q8NGK3 314 aa8.15□□□□□ -1.1
PDCD4-211ENST00000498367 DDX1Q92499 740 aaKnown RBP8.15□□□□□ -1.1
PDCD4-211ENST00000498367 CENPIQ92674 756 aaPredicted RBP8.15□□□□□ -1.1
PDCD4-211ENST00000498367 KIF1BPQ96EK5 621 aa8.15□□□□□ -1.1
PDCD4-211ENST00000498367 RBM18Q96H35 190 aaKnown RBP8.15□□□□□ -1.1
PDCD4-211ENST00000498367 UBXN10Q96LJ8 280 aa8.15□□□□□ -1.1
PDCD4-211ENST00000498367 CCDC114Q96M63 670 aa8.15□□□□□ -1.1
PDCD4-211ENST00000498367 JAKMIP1Q96N16 626 aaKnown RBP8.15□□□□□ -1.1
PDCD4-211ENST00000498367 RHOXF2Q9BQY4 288 aa8.15□□□□□ -1.1
PDCD4-211ENST00000498367 CHCHD6Q9BRQ6 235 aa8.15□□□□□ -1.1
PDCD4-211ENST00000498367 WDR12Q9GZL7 423 aaKnown RBP8.15□□□□□ -1.1
PDCD4-211ENST00000498367 GRPEL1Q9HAV7 217 aa8.15□□□□□ -1.1
PDCD4-211ENST00000498367 TRPV4Q9HBA0 871 aa8.15□□□□□ -1.1
PDCD4-211ENST00000498367 CCDC39Q9UFE4 941 aa8.15□□□□□ -1.1
PDCD4-211ENST00000498367 C2CD2Q9Y426 696 aa8.15□□□□□ -1.1
PDCD4-211ENST00000498367 N6AMT1Q9Y5N5 214 aa8.15□□□□□ -1.1
PDCD4-211ENST00000498367 CFAP65Q6ZU64 1925 aaKnown RBP8.15□□□□□ -1.11
PDCD4-211ENST00000498367 PHF20L1A8MW92 1017 aa8.14□□□□□ -1.11
PDCD4-211ENST00000498367 B4E171 279 aa8.14□□□□□ -1.11
PDCD4-211ENST00000498367 F5H0A9 414 aaPredicted RBP8.14□□□□□ -1.11
PDCD4-211ENST00000498367 TSC22D2O75157 780 aa8.14□□□□□ -1.11
PDCD4-211ENST00000498367 TMEM127O75204 238 aa8.14□□□□□ -1.11
PDCD4-211ENST00000498367 FAM153BP0C7A2 387 aa8.14□□□□□ -1.11
PDCD4-211ENST00000498367 RHCEP18577 417 aa8.14□□□□□ -1.11
PDCD4-211ENST00000498367 ATP5DP30049 168 aa8.14□□□□□ -1.11
PDCD4-211ENST00000498367 CD86P42081 329 aa8.14□□□□□ -1.11
PDCD4-211ENST00000498367 TMPRSS15P98073 1019 aa8.14□□□□□ -1.11
PDCD4-211ENST00000498367 RHDQ02161 417 aa8.14□□□□□ -1.11
PDCD4-211ENST00000498367 TNFAIP2Q03169 654 aa8.14□□□□□ -1.11
PDCD4-211ENST00000498367 IFIT5Q13325 482 aaKnown RBP8.14□□□□□ -1.11
PDCD4-211ENST00000498367 CBX2Q14781 532 aaPredicted RBP8.14□□□□□ -1.11
PDCD4-211ENST00000498367 GRIN2CQ14957 1233 aa8.14□□□□□ -1.11
PDCD4-211ENST00000498367 TUBB8Q3ZCM7 444 aa8.14□□□□□ -1.11
PDCD4-211ENST00000498367 CFAP100Q494V2 611 aa8.14□□□□□ -1.11
PDCD4-211ENST00000498367 ANKDD1AQ495B1 522 aa8.14□□□□□ -1.11
PDCD4-211ENST00000498367 CYB5RLQ6IPT4 315 aa8.14□□□□□ -1.11
PDCD4-211ENST00000498367 SYNE3Q6ZMZ3 975 aa8.14□□□□□ -1.11
PDCD4-211ENST00000498367 CCDC81Q6ZN84 652 aa8.14□□□□□ -1.11
PDCD4-211ENST00000498367 CDC37L1Q7L3B6 337 aa8.14□□□□□ -1.11
PDCD4-211ENST00000498367 LYSMD3Q7Z3D4 306 aa8.14□□□□□ -1.11
PDCD4-211ENST00000498367 MAP4K3Q8IVH8 894 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms