RNA–Protein interactions for RNA: ENST00000498259.1

SF3A1-210, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 875 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-210ENST00000498259 TREML2Q5T2D2 321 aa9.47□□□□□ -0.89
SF3A1-210ENST00000498259 CNNM4Q6P4Q7 775 aa9.47□□□□□ -0.89
SF3A1-210ENST00000498259 KCNV1Q6PIU1 500 aa9.47□□□□□ -0.89
SF3A1-210ENST00000498259 USP49Q70CQ1 688 aa9.47□□□□□ -0.89
SF3A1-210ENST00000498259 SH3RF1Q7Z6J0 888 aa9.47□□□□□ -0.89
SF3A1-210ENST00000498259 ANKRD23Q86SG2 305 aa9.47□□□□□ -0.89
SF3A1-210ENST00000498259 NCAPG2Q86XI2 1143 aa9.47□□□□□ -0.89
SF3A1-210ENST00000498259 SHCBP1Q8NEM2 672 aa9.47□□□□□ -0.89
SF3A1-210ENST00000498259 GPRC5AQ8NFJ5 357 aa9.47□□□□□ -0.89
SF3A1-210ENST00000498259 RDM1Q8NG50 284 aa9.47□□□□□ -0.89
SF3A1-210ENST00000498259 SPATA20Q8TB22 786 aa9.47□□□□□ -0.89
SF3A1-210ENST00000498259 SLC5A5Q92911 643 aa9.47□□□□□ -0.89
SF3A1-210ENST00000498259 GPRASP2Q96D09 838 aa9.47□□□□□ -0.89
SF3A1-210ENST00000498259 WNK4Q96J92 1243 aa9.47□□□□□ -0.89
SF3A1-210ENST00000498259 PARK7Q99497 189 aaKnown RBP9.47□□□□□ -0.89
SF3A1-210ENST00000498259 P2RX7Q99572 595 aaKnown RBP9.47□□□□□ -0.89
SF3A1-210ENST00000498259 POLR3CQ9BUI4 534 aaPredicted RBP9.47□□□□□ -0.89
SF3A1-210ENST00000498259 DNAJC25Q9H1X3 360 aa9.47□□□□□ -0.89
SF3A1-210ENST00000498259 TUFT1Q9NNX1 390 aa9.47□□□□□ -0.89
SF3A1-210ENST00000498259 PXMP2Q9NR77 195 aa9.47□□□□□ -0.89
SF3A1-210ENST00000498259 KBTBD4Q9NVX7 518 aa9.47□□□□□ -0.89
SF3A1-210ENST00000498259 CYP39A1Q9NYL5 469 aa9.47□□□□□ -0.89
SF3A1-210ENST00000498259 FRMPD4Q14CM0 1322 aa9.47□□□□□ -0.89
SF3A1-210ENST00000498259 IGLV3-22A0A075B6J6 115 aa9.46□□□□□ -0.9
SF3A1-210ENST00000498259 CCL15-CCL14A0A0B4J2E2 113 aa9.46□□□□□ -0.9
SF3A1-210ENST00000498259 PVALEFA0A1B0GWK0 134 aa9.46□□□□□ -0.9
SF3A1-210ENST00000498259 MANSC4A6NHS7 340 aaPredicted RBP9.46□□□□□ -0.9
SF3A1-210ENST00000498259 POTEB2H3BUK9 544 aa9.46□□□□□ -0.9
SF3A1-210ENST00000498259 TRAF5O00463 557 aa9.46□□□□□ -0.9
SF3A1-210ENST00000498259 STRNO43815 780 aa9.46□□□□□ -0.9
SF3A1-210ENST00000498259 EIF3JO75822 258 aaKnown RBP9.46□□□□□ -0.9
SF3A1-210ENST00000498259 FCER1AP12319 257 aa9.46□□□□□ -0.9
SF3A1-210ENST00000498259 PLCG1P19174 1290 aa9.46□□□□□ -0.9
SF3A1-210ENST00000498259 KRT76Q01546 638 aa9.46□□□□□ -0.9
SF3A1-210ENST00000498259 DPYDQ12882 1025 aa9.46□□□□□ -0.9
SF3A1-210ENST00000498259 DGKZQ13574 1117 aa9.46□□□□□ -0.9
SF3A1-210ENST00000498259 PGM5Q15124 567 aa9.46□□□□□ -0.9
SF3A1-210ENST00000498259 STXBP2Q15833 593 aa9.46□□□□□ -0.9
SF3A1-210ENST00000498259 CCL15Q16663 113 aa9.46□□□□□ -0.9
SF3A1-210ENST00000498259 MUM1L1Q5H9M0 696 aa9.46□□□□□ -0.9
SF3A1-210ENST00000498259 NCAPH2Q6IBW4 605 aa9.46□□□□□ -0.9
SF3A1-210ENST00000498259 PDXDC2PQ6P474 469 aa9.46□□□□□ -0.9
SF3A1-210ENST00000498259 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.46□□□□□ -0.9
SF3A1-210ENST00000498259 VSIG10LQ86VR7 867 aa9.46□□□□□ -0.9
SF3A1-210ENST00000498259 ANKRD20A12PQ8NF67 263 aa9.46□□□□□ -0.9
SF3A1-210ENST00000498259 LARP4BQ92615 738 aaKnown RBP9.46□□□□□ -0.9
SF3A1-210ENST00000498259 CCDC102AQ96A19 550 aa9.46□□□□□ -0.9
SF3A1-210ENST00000498259 C7orf25Q9BPX7 421 aa9.46□□□□□ -0.9
SF3A1-210ENST00000498259 PDCD2LQ9BRP1 358 aa9.46□□□□□ -0.9
SF3A1-210ENST00000498259 GPBP1L1Q9HC44 474 aaPredicted RBP9.46□□□□□ -0.9
SF3A1-210ENST00000498259 SLC5A4Q9NY91 659 aa9.46□□□□□ -0.9
SF3A1-210ENST00000498259 KCND2Q9NZV8 630 aa9.46□□□□□ -0.9
SF3A1-210ENST00000498259 UBIAD1Q9Y5Z9 338 aa9.46□□□□□ -0.9
SF3A1-210ENST00000498259 PHIPQ8WWQ0 1821 aa9.45□□□□□ -0.9
SF3A1-210ENST00000498259 TESPA1A2RU30 521 aaPredicted RBP9.45□□□□□ -0.9
SF3A1-210ENST00000498259 POTEMA6NI47 508 aa9.45□□□□□ -0.9
SF3A1-210ENST00000498259 PDHXO00330 501 aa9.45□□□□□ -0.9
SF3A1-210ENST00000498259 BIN1O00499 593 aa9.45□□□□□ -0.9
SF3A1-210ENST00000498259 RPN1P04843 607 aaKnown RBP9.45□□□□□ -0.9
SF3A1-210ENST00000498259 KRT18P05783 430 aaKnown RBP9.45□□□□□ -0.9
SF3A1-210ENST00000498259 NR3C2P08235 984 aa9.45□□□□□ -0.9
SF3A1-210ENST00000498259 TGFB3P10600 412 aa9.45□□□□□ -0.9
SF3A1-210ENST00000498259 MYCLP12524 364 aaPredicted RBP9.45□□□□□ -0.9
SF3A1-210ENST00000498259 EIF2AK2P19525 551 aaKnown RBP9.45□□□□□ -0.9
SF3A1-210ENST00000498259 CDC25AP30304 524 aa9.45□□□□□ -0.9
SF3A1-210ENST00000498259 JAK3P52333 1124 aa9.45□□□□□ -0.9
SF3A1-210ENST00000498259 HUNKP57058 714 aa9.45□□□□□ -0.9
SF3A1-210ENST00000498259 PLCB2Q00722 1185 aa9.45□□□□□ -0.9
SF3A1-210ENST00000498259 MYL5Q02045 173 aa9.45□□□□□ -0.9
SF3A1-210ENST00000498259 MORC3Q14149 939 aa9.45□□□□□ -0.9
SF3A1-210ENST00000498259 EPHA7Q15375 998 aa9.45□□□□□ -0.9
SF3A1-210ENST00000498259 ZNF658Q5TYW1 1059 aaPredicted RBP9.45□□□□□ -0.9
SF3A1-210ENST00000498259 SPRYD7Q5W111 196 aa9.45□□□□□ -0.9
SF3A1-210ENST00000498259 MOB2Q70IA6 237 aa9.45□□□□□ -0.9
SF3A1-210ENST00000498259 OTOP1Q7RTM1 612 aa9.45□□□□□ -0.9
SF3A1-210ENST00000498259 CCDC65Q8IXS2 484 aa9.45□□□□□ -0.9
SF3A1-210ENST00000498259 SMAP1Q8IYB5 467 aaPredicted RBP9.45□□□□□ -0.9
SF3A1-210ENST00000498259 SMC1BQ8NDV3 1235 aa9.45□□□□□ -0.9
SF3A1-210ENST00000498259 TBC1D5Q92609 795 aa9.45□□□□□ -0.9
SF3A1-210ENST00000498259 RAD54LQ92698 747 aa9.45□□□□□ -0.9
SF3A1-210ENST00000498259 LENG9Q96B70 501 aa9.45□□□□□ -0.9
SF3A1-210ENST00000498259 NACC1Q96RE7 527 aa9.45□□□□□ -0.9
SF3A1-210ENST00000498259 TAAR1Q96RJ0 339 aa9.45□□□□□ -0.9
SF3A1-210ENST00000498259 PAGR1Q9BTK6 254 aa9.45□□□□□ -0.9
SF3A1-210ENST00000498259 CBX8Q9HC52 389 aa9.45□□□□□ -0.9
SF3A1-210ENST00000498259 A1CFQ9NQ94 594 aaKnown RBP9.45□□□□□ -0.9
SF3A1-210ENST00000498259 KCNH7Q9NS40 1196 aa9.45□□□□□ -0.9
SF3A1-210ENST00000498259 EXOC1Q9NV70 894 aa9.45□□□□□ -0.9
SF3A1-210ENST00000498259 MAN1B1Q9UKM7 699 aa9.45□□□□□ -0.9
SF3A1-210ENST00000498259 SAMM50Q9Y512 469 aa9.45□□□□□ -0.9
SF3A1-210ENST00000498259 RIPK3Q9Y572 518 aa9.45□□□□□ -0.9
SF3A1-210ENST00000498259 IVNS1ABPQ9Y6Y0 642 aa9.45□□□□□ -0.9
SF3A1-210ENST00000498259 A0A087X0B3 334 aa9.44□□□□□ -0.9
SF3A1-210ENST00000498259 BICDL2A1A5D9 508 aa9.44□□□□□ -0.9
SF3A1-210ENST00000498259 PSMA7O14818 248 aa9.44□□□□□ -0.9
SF3A1-210ENST00000498259 CBFA2T2O43439 604 aa9.44□□□□□ -0.9
SF3A1-210ENST00000498259 PSMD10O75832 226 aa9.44□□□□□ -0.9
SF3A1-210ENST00000498259 FGFR1OPO95684 399 aaKnown RBP9.44□□□□□ -0.9
SF3A1-210ENST00000498259 ITGBL1O95965 494 aaPredicted RBP9.44□□□□□ -0.9
SF3A1-210ENST00000498259 ZNF157P51786 506 aaPredicted RBP9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms