RNA–Protein interactions for RNA: ENST00000498212.1

HMGXB4-207, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 778 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-207ENST00000498212 NEFLP07196 543 aa9.77□□□□□ -0.85
HMGXB4-207ENST00000498212 TGFB3P10600 412 aa9.77□□□□□ -0.85
HMGXB4-207ENST00000498212 EXOSC10Q01780 885 aaKnown RBP9.77□□□□□ -0.85
HMGXB4-207ENST00000498212 ADCK5Q3MIX3 580 aa9.77□□□□□ -0.85
HMGXB4-207ENST00000498212 GNPTABQ3T906 1256 aa9.77□□□□□ -0.85
HMGXB4-207ENST00000498212 CELF3Q5SZQ8 465 aaKnown RBP9.77□□□□□ -0.85
HMGXB4-207ENST00000498212 RASIP1Q5U651 963 aa9.77□□□□□ -0.85
HMGXB4-207ENST00000498212 MYSM1Q5VVJ2 828 aa9.77□□□□□ -0.85
HMGXB4-207ENST00000498212 APOA5Q6Q788 366 aa9.77□□□□□ -0.85
HMGXB4-207ENST00000498212 TMTC3Q6ZXV5 915 aa9.77□□□□□ -0.85
HMGXB4-207ENST00000498212 DHX32Q7L7V1 743 aaKnown RBP9.77□□□□□ -0.85
HMGXB4-207ENST00000498212 RASEFQ8IZ41 740 aa9.77□□□□□ -0.85
HMGXB4-207ENST00000498212 RPUSD2Q8IZ73 545 aaKnown RBP9.77□□□□□ -0.85
HMGXB4-207ENST00000498212 CCDC82Q8N4S0 544 aa9.77□□□□□ -0.85
HMGXB4-207ENST00000498212 HERVK_113Q902F9 699 aa9.77□□□□□ -0.85
HMGXB4-207ENST00000498212 KAT2BQ92831 832 aa9.77□□□□□ -0.85
HMGXB4-207ENST00000498212 SCLYQ96I15 445 aa9.77□□□□□ -0.85
HMGXB4-207ENST00000498212 TCEANC2Q96MN5 208 aa9.77□□□□□ -0.85
HMGXB4-207ENST00000498212 GUCD1Q96NT3 240 aa9.77□□□□□ -0.85
HMGXB4-207ENST00000498212 SEMA6BQ9H3T3 888 aa9.77□□□□□ -0.85
HMGXB4-207ENST00000498212 RBM28Q9NW13 759 aaKnown RBP9.77□□□□□ -0.85
HMGXB4-207ENST00000498212 NOD1Q9Y239 953 aa9.77□□□□□ -0.85
HMGXB4-207ENST00000498212 TET1Q8NFU7 2136 aa9.76□□□□□ -0.85
HMGXB4-207ENST00000498212 SORBS3O60504 671 aa9.76□□□□□ -0.85
HMGXB4-207ENST00000498212 F2P00734 622 aa9.76□□□□□ -0.85
HMGXB4-207ENST00000498212 PFKMP08237 780 aa9.76□□□□□ -0.85
HMGXB4-207ENST00000498212 HMGB1P09429 215 aaKnown RBP9.76□□□□□ -0.85
HMGXB4-207ENST00000498212 ZNF286BP0CG31 522 aa9.76□□□□□ -0.85
HMGXB4-207ENST00000498212 UBA1P22314 1058 aaKnown RBP9.76□□□□□ -0.85
HMGXB4-207ENST00000498212 DNAJB2P25686 324 aa9.76□□□□□ -0.85
HMGXB4-207ENST00000498212 PSEN2P49810 448 aa9.76□□□□□ -0.85
HMGXB4-207ENST00000498212 MRPS9P82933 396 aaKnown RBP9.76□□□□□ -0.85
HMGXB4-207ENST00000498212 SP2Q02086 613 aa9.76□□□□□ -0.85
HMGXB4-207ENST00000498212 BFSP2Q13515 415 aa9.76□□□□□ -0.85
HMGXB4-207ENST00000498212 PTGISQ16647 500 aa9.76□□□□□ -0.85
HMGXB4-207ENST00000498212 HSDL1Q3SXM5 330 aa9.76□□□□□ -0.85
HMGXB4-207ENST00000498212 PCNX4Q63HM2 1172 aa9.76□□□□□ -0.85
HMGXB4-207ENST00000498212 USP17L6PQ6QN14 398 aa9.76□□□□□ -0.85
HMGXB4-207ENST00000498212 OTOP2Q7RTS6 562 aa9.76□□□□□ -0.85
HMGXB4-207ENST00000498212 SESTD1Q86VW0 696 aa9.76□□□□□ -0.85
HMGXB4-207ENST00000498212 CCDC155Q8N6L0 562 aa9.76□□□□□ -0.85
HMGXB4-207ENST00000498212 RETREG2Q8NC44 543 aa9.76□□□□□ -0.85
HMGXB4-207ENST00000498212 GPKOWQ92917 476 aaPredicted RBP eCLIP9.76□□□□□ -0.85
HMGXB4-207ENST00000498212 SPATA33Q96N06 139 aa9.76□□□□□ -0.85
HMGXB4-207ENST00000498212 INPP4AQ96PE3 977 aaPredicted RBP9.76□□□□□ -0.85
HMGXB4-207ENST00000498212 ALG1Q9BT22 464 aa9.76□□□□□ -0.85
HMGXB4-207ENST00000498212 TTYH1Q9H313 450 aaPredicted RBP9.76□□□□□ -0.85
HMGXB4-207ENST00000498212 PSTPIP2Q9H939 334 aa9.76□□□□□ -0.85
HMGXB4-207ENST00000498212 MLXIPQ9HAP2 919 aa9.76□□□□□ -0.85
HMGXB4-207ENST00000498212 RTEL1Q9NZ71 1219 aa9.76□□□□□ -0.85
HMGXB4-207ENST00000498212 GTF2IRD1Q9UHL9 959 aa9.76□□□□□ -0.85
HMGXB4-207ENST00000498212 LAMA2P24043 3122 aaKnown RBP9.76□□□□□ -0.85
HMGXB4-207ENST00000498212 hCG_1642624A0A1W2PR95 340 aa9.75□□□□□ -0.85
HMGXB4-207ENST00000498212 HAS3O00219 553 aa9.75□□□□□ -0.85
HMGXB4-207ENST00000498212 ZBTB43O43298 467 aa9.75□□□□□ -0.85
HMGXB4-207ENST00000498212 FIBPO43427 364 aa9.75□□□□□ -0.85
HMGXB4-207ENST00000498212 PPFIA4O75335 1185 aa9.75□□□□□ -0.85
HMGXB4-207ENST00000498212 IQCF3P0C7M6 154 aa9.75□□□□□ -0.85
HMGXB4-207ENST00000498212 HOXD8P13378 290 aaPredicted RBP9.75□□□□□ -0.85
HMGXB4-207ENST00000498212 ICAM3P32942 547 aa9.75□□□□□ -0.85
HMGXB4-207ENST00000498212 HSPA4P34932 840 aa9.75□□□□□ -0.85
HMGXB4-207ENST00000498212 FGD1P98174 961 aa9.75□□□□□ -0.85
HMGXB4-207ENST00000498212 MFSD10Q14728 455 aa9.75□□□□□ -0.85
HMGXB4-207ENST00000498212 RTN1Q16799 776 aa9.75□□□□□ -0.85
HMGXB4-207ENST00000498212 KIAA0753Q2KHM9 967 aa9.75□□□□□ -0.85
HMGXB4-207ENST00000498212 GDF6Q6KF10 455 aaPredicted RBP9.75□□□□□ -0.85
HMGXB4-207ENST00000498212 XRRA1Q6P2D8 792 aa9.75□□□□□ -0.85
HMGXB4-207ENST00000498212 DEFB128Q7Z7B8 93 aa9.75□□□□□ -0.85
HMGXB4-207ENST00000498212 C7orf31Q8N865 590 aa9.75□□□□□ -0.85
HMGXB4-207ENST00000498212 SLC17A8Q8NDX2 589 aa9.75□□□□□ -0.85
HMGXB4-207ENST00000498212 TIFAQ96CG3 184 aa9.75□□□□□ -0.85
HMGXB4-207ENST00000498212 CDX2Q99626 313 aaPredicted RBP9.75□□□□□ -0.85
HMGXB4-207ENST00000498212 PBX4Q9BYU1 374 aa9.75□□□□□ -0.85
HMGXB4-207ENST00000498212 CXXC1Q9P0U4 656 aaPredicted RBP9.75□□□□□ -0.85
HMGXB4-207ENST00000498212 HDAC6Q9UBN7 1215 aa9.75□□□□□ -0.85
HMGXB4-207ENST00000498212 BRPF3Q9ULD4 1205 aa9.75□□□□□ -0.85
HMGXB4-207ENST00000498212 CNTNAP5Q8WYK1 1306 aa9.75□□□□□ -0.85
HMGXB4-207ENST00000498212 MICAL3Q7RTP6 2002 aa9.74□□□□□ -0.85
HMGXB4-207ENST00000498212 KLF18A0A0U1RQI7 1052 aa9.74□□□□□ -0.85
HMGXB4-207ENST00000498212 GOLGA8AA7E2F4 631 aa9.74□□□□□ -0.85
HMGXB4-207ENST00000498212 GOLGA8BA8MQT2 603 aa9.74□□□□□ -0.85
HMGXB4-207ENST00000498212 ZBBXA8MT70 800 aa9.74□□□□□ -0.85
HMGXB4-207ENST00000498212 GRXCR1A8MXD5 290 aa9.74□□□□□ -0.85
HMGXB4-207ENST00000498212 SPATA31C2B4DYI2 1134 aa9.74□□□□□ -0.85
HMGXB4-207ENST00000498212 NOP56O00567 594 aaKnown RBP9.74□□□□□ -0.85
HMGXB4-207ENST00000498212 REC8O95072 547 aa9.74□□□□□ -0.85
HMGXB4-207ENST00000498212 ACTN1P12814 892 aa9.74□□□□□ -0.85
HMGXB4-207ENST00000498212 RFC2P35250 354 aa9.74□□□□□ -0.85
HMGXB4-207ENST00000498212 SEMA3FQ13275 785 aa9.74□□□□□ -0.85
HMGXB4-207ENST00000498212 NEDD9Q14511 834 aa9.74□□□□□ -0.85
HMGXB4-207ENST00000498212 UBE2SQ16763 222 aa9.74□□□□□ -0.85
HMGXB4-207ENST00000498212 HEATR3Q7Z4Q2 680 aa9.74□□□□□ -0.85
HMGXB4-207ENST00000498212 NLRX1Q86UT6 975 aa9.74□□□□□ -0.85
HMGXB4-207ENST00000498212 CAGE1Q8TC20 777 aa9.74□□□□□ -0.85
HMGXB4-207ENST00000498212 KCNB2Q92953 911 aa9.74□□□□□ -0.85
HMGXB4-207ENST00000498212 VWCEQ96DN2 955 aa9.74□□□□□ -0.85
HMGXB4-207ENST00000498212 CTAGE1Q96RT6 745 aa9.74□□□□□ -0.85
HMGXB4-207ENST00000498212 NAP1L2Q9ULW6 460 aaPredicted RBP9.74□□□□□ -0.85
HMGXB4-207ENST00000498212 SLC4A7Q9Y6M7 1214 aa9.74□□□□□ -0.85
HMGXB4-207ENST00000498212 WDR81Q562E7 1941 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms