RNA–Protein interactions for RNA: ENST00000497015.5

SRSF4-205, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 2

Gene SRSF4, Length 516 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-205ENST00000497015 CLUL1Q15846 466 aa11.53□□□□□ -0.56
SRSF4-205ENST00000497015 MCMDC2Q4G0Z9 681 aa11.53□□□□□ -0.56
SRSF4-205ENST00000497015 ZNF618Q5T7W0 954 aa11.53□□□□□ -0.56
SRSF4-205ENST00000497015 TTC22Q5TAA0 569 aa11.53□□□□□ -0.56
SRSF4-205ENST00000497015 TRIM67Q6ZTA4 783 aa11.53□□□□□ -0.56
SRSF4-205ENST00000497015 EP400NLQ6ZTU2 488 aa11.53□□□□□ -0.56
SRSF4-205ENST00000497015 SESTD1Q86VW0 696 aa11.53□□□□□ -0.56
SRSF4-205ENST00000497015 CAGE1Q8TC20 777 aa11.53□□□□□ -0.56
SRSF4-205ENST00000497015 RILPL2Q969X0 211 aa11.53□□□□□ -0.56
SRSF4-205ENST00000497015 PBXIP1Q96AQ6 731 aa11.53□□□□□ -0.56
SRSF4-205ENST00000497015 UPF3BQ9BZI7 483 aaKnown RBP11.53□□□□□ -0.56
SRSF4-205ENST00000497015 ZNF287Q9HBT7 754 aa11.53□□□□□ -0.56
SRSF4-205ENST00000497015 EPB41L4AQ9HCS5 686 aaPredicted RBP11.53□□□□□ -0.56
SRSF4-205ENST00000497015 CLDND1Q9NY35 253 aa11.53□□□□□ -0.56
SRSF4-205ENST00000497015 INSL6Q9Y581 213 aa11.53□□□□□ -0.56
SRSF4-205ENST00000497015 TMEM221A6NGB7 291 aa11.52□□□□□ -0.57
SRSF4-205ENST00000497015 M0R296 226 aa11.52□□□□□ -0.57
SRSF4-205ENST00000497015 M0R2C6 588 aa11.52□□□□□ -0.57
SRSF4-205ENST00000497015 TRAK2O60296 914 aa11.52□□□□□ -0.57
SRSF4-205ENST00000497015 KPNA6O60684 536 aa11.52□□□□□ -0.57
SRSF4-205ENST00000497015 LINC00271P0C7V0 271 aa11.52□□□□□ -0.57
SRSF4-205ENST00000497015 SDSP20132 328 aa11.52□□□□□ -0.57
SRSF4-205ENST00000497015 EDNRBP24530 442 aa11.52□□□□□ -0.57
SRSF4-205ENST00000497015 VCPP55072 806 aaKnown RBP11.52□□□□□ -0.57
SRSF4-205ENST00000497015 FOXK2Q01167 660 aa11.52□□□□□ -0.57
SRSF4-205ENST00000497015 HYAL1Q12794 435 aa11.52□□□□□ -0.57
SRSF4-205ENST00000497015 GPM6BQ13491 265 aa11.52□□□□□ -0.57
SRSF4-205ENST00000497015 IKBKEQ14164 716 aa11.52□□□□□ -0.57
SRSF4-205ENST00000497015 ALX1Q15699 326 aa11.52□□□□□ -0.57
SRSF4-205ENST00000497015 PPP1R15BQ5SWA1 713 aa11.52□□□□□ -0.57
SRSF4-205ENST00000497015 CCDC62Q6P9F0 684 aa11.52□□□□□ -0.57
SRSF4-205ENST00000497015 RPAINQ86UA6 219 aa11.52□□□□□ -0.57
SRSF4-205ENST00000497015 FAM160B2Q86V87 743 aa11.52□□□□□ -0.57
SRSF4-205ENST00000497015 ZNF444Q8N0Y2 327 aaPredicted RBP11.52□□□□□ -0.57
SRSF4-205ENST00000497015 DBF4BQ8NFT6 615 aa11.52□□□□□ -0.57
SRSF4-205ENST00000497015 NEDD1Q8NHV4 660 aa11.52□□□□□ -0.57
SRSF4-205ENST00000497015 CHURC1Q8WUH1 139 aa11.52□□□□□ -0.57
SRSF4-205ENST00000497015 CLEC4DQ8WXI8 215 aa11.52□□□□□ -0.57
SRSF4-205ENST00000497015 GMCL1Q96IK5 515 aa11.52□□□□□ -0.57
SRSF4-205ENST00000497015 CCDC136Q96JN2 1154 aa11.52□□□□□ -0.57
SRSF4-205ENST00000497015 CTNNA3Q9UI47 895 aa11.52□□□□□ -0.57
SRSF4-205ENST00000497015 SYNPO2Q9UMS6 1093 aa11.52□□□□□ -0.57
SRSF4-205ENST00000497015 ZFHX2Q9C0A1 2572 aaPredicted RBP11.51□□□□□ -0.57
SRSF4-205ENST00000497015 LINC01565O15544 149 aa11.51□□□□□ -0.57
SRSF4-205ENST00000497015 TDO2P48775 406 aa11.51□□□□□ -0.57
SRSF4-205ENST00000497015 NT5C2P49902 561 aa11.51□□□□□ -0.57
SRSF4-205ENST00000497015 TTBK2Q6IQ55 1244 aa11.51□□□□□ -0.57
SRSF4-205ENST00000497015 RCSD1Q6JBY9 416 aa11.51□□□□□ -0.57
SRSF4-205ENST00000497015 TMEM192Q8IY95 271 aa11.51□□□□□ -0.57
SRSF4-205ENST00000497015 IFNL3Q8IZI9 196 aa11.51□□□□□ -0.57
SRSF4-205ENST00000497015 AFG1LQ8WV93 481 aa11.51□□□□□ -0.57
SRSF4-205ENST00000497015 NSUN3Q9H649 340 aaKnown RBP11.51□□□□□ -0.57
SRSF4-205ENST00000497015 INCENPQ9NQS7 918 aa11.51□□□□□ -0.57
SRSF4-205ENST00000497015 IL17RBQ9NRM6 502 aa11.51□□□□□ -0.57
SRSF4-205ENST00000497015 HDAC6Q9UBN7 1215 aa11.51□□□□□ -0.57
SRSF4-205ENST00000497015 NOD1Q9Y239 953 aa11.51□□□□□ -0.57
SRSF4-205ENST00000497015 FARP1Q9Y4F1 1045 aaPredicted RBP11.51□□□□□ -0.57
SRSF4-205ENST00000497015 MYO15AQ9UKN7 3530 aa11.51□□□□□ -0.57
SRSF4-205ENST00000497015 RAD50Q92878 1312 aa11.51□□□□□ -0.57
SRSF4-205ENST00000497015 NKRFO15226 690 aaKnown RBP eCLIP11.5□□□□□ -0.57
SRSF4-205ENST00000497015 TBX10O75333 385 aa11.5□□□□□ -0.57
SRSF4-205ENST00000497015 RGS20O76081 388 aa11.5□□□□□ -0.57
SRSF4-205ENST00000497015 ICAM1P05362 532 aa11.5□□□□□ -0.57
SRSF4-205ENST00000497015 SLC3A2P08195 630 aaKnown RBP11.5□□□□□ -0.57
SRSF4-205ENST00000497015 TXNP10599 105 aaKnown RBP11.5□□□□□ -0.57
SRSF4-205ENST00000497015 SLC16A2P36021 539 aa11.5□□□□□ -0.57
SRSF4-205ENST00000497015 ZXDAP98168 799 aa11.5□□□□□ -0.57
SRSF4-205ENST00000497015 PTPROQ16827 1216 aa11.5□□□□□ -0.57
SRSF4-205ENST00000497015 TIGD5Q53EQ6 642 aa11.5□□□□□ -0.57
SRSF4-205ENST00000497015 SLC30A10Q6XR72 485 aa11.5□□□□□ -0.57
SRSF4-205ENST00000497015 ASCL5Q7RTU5 278 aa11.5□□□□□ -0.57
SRSF4-205ENST00000497015 PARP9Q8IXQ6 854 aa11.5□□□□□ -0.57
SRSF4-205ENST00000497015 SEC62Q99442 399 aaKnown RBP11.5□□□□□ -0.57
SRSF4-205ENST00000497015 NAPBQ9H115 298 aa11.5□□□□□ -0.57
SRSF4-205ENST00000497015 DIAPH3Q9NSV4 1193 aa11.5□□□□□ -0.57
SRSF4-205ENST00000497015 GTF2IRD1Q9UHL9 959 aa11.5□□□□□ -0.57
SRSF4-205ENST00000497015 CCPG1Q9ULG6 757 aa11.5□□□□□ -0.57
SRSF4-205ENST00000497015 CCDC171Q6TFL3 1326 aa11.5□□□□□ -0.57
SRSF4-205ENST00000497015 A0A0D9SFI3 127 aa11.49□□□□□ -0.57
SRSF4-205ENST00000497015 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.49□□□□□ -0.57
SRSF4-205ENST00000497015 STXBP3O00186 592 aa11.49□□□□□ -0.57
SRSF4-205ENST00000497015 GRM6O15303 877 aa11.49□□□□□ -0.57
SRSF4-205ENST00000497015 NMT2O60551 498 aa11.49□□□□□ -0.57
SRSF4-205ENST00000497015 PARNO95453 639 aaKnown RBP11.49□□□□□ -0.57
SRSF4-205ENST00000497015 APPP05067 770 aa11.49□□□□□ -0.57
SRSF4-205ENST00000497015 MMP3P08254 477 aa11.49□□□□□ -0.57
SRSF4-205ENST00000497015 GSPT1P15170 499 aaKnown RBP11.49□□□□□ -0.57
SRSF4-205ENST00000497015 SLC1A4P43007 532 aa11.49□□□□□ -0.57
SRSF4-205ENST00000497015 TFAP4Q01664 338 aa11.49□□□□□ -0.57
SRSF4-205ENST00000497015 ARHGAP1Q07960 439 aa11.49□□□□□ -0.57
SRSF4-205ENST00000497015 NMIQ13287 307 aaPredicted RBP11.49□□□□□ -0.57
SRSF4-205ENST00000497015 CAMK1Q14012 370 aa11.49□□□□□ -0.57
SRSF4-205ENST00000497015 PPP2R5BQ15173 497 aa11.49□□□□□ -0.57
SRSF4-205ENST00000497015 LY6KQ17RY6 165 aa11.49□□□□□ -0.57
SRSF4-205ENST00000497015 MYOCDQ8IZQ8 938 aa11.49□□□□□ -0.57
SRSF4-205ENST00000497015 FBXL6Q8N531 539 aa11.49□□□□□ -0.57
SRSF4-205ENST00000497015 SCFD2Q8WU76 684 aa11.49□□□□□ -0.57
SRSF4-205ENST00000497015 RUFY2Q8WXA3 655 aa11.49□□□□□ -0.57
SRSF4-205ENST00000497015 TOP1MTQ969P6 601 aa11.49□□□□□ -0.57
SRSF4-205ENST00000497015 ASIC4Q96FT7 647 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms