RNA–Protein interactions for RNA: ENST00000496785.5

CTDSP1-213, Transcript of CTD small phosphatase 1, humanhuman

TSL 5

Gene CTDSP1, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-213ENST00000496785 PRKAG2Q9UGJ0 569 aa22■■□□□ 1.11
CTDSP1-213ENST00000496785 ATP11BQ9Y2G3 1177 aa22■■□□□ 1.11
CTDSP1-213ENST00000496785 TNRC18O15417 2968 aaPredicted RBP22■■□□□ 1.11
CTDSP1-213ENST00000496785 SREBF1P36956 1147 aa21.99■■□□□ 1.11
CTDSP1-213ENST00000496785 IRX5P78411 483 aaPredicted RBP21.99■■□□□ 1.11
CTDSP1-213ENST00000496785 ARHGAP1Q07960 439 aa21.99■■□□□ 1.11
CTDSP1-213ENST00000496785 CXCL17Q6UXB2 119 aa21.99■■□□□ 1.11
CTDSP1-213ENST00000496785 SENP7Q9BQF6 1050 aa21.99■■□□□ 1.11
CTDSP1-213ENST00000496785 MLXIPQ9HAP2 919 aa21.99■■□□□ 1.11
CTDSP1-213ENST00000496785 ORC3Q9UBD5 711 aaPredicted RBP21.99■■□□□ 1.11
CTDSP1-213ENST00000496785 MKI67P46013 3256 aaKnown RBP21.98■■□□□ 1.11
CTDSP1-213ENST00000496785 SPATA31C2B4DYI2 1134 aa21.98■■□□□ 1.11
CTDSP1-213ENST00000496785 GGPS1O95749 300 aa21.98■■□□□ 1.11
CTDSP1-213ENST00000496785 MYL3P08590 195 aa21.98■■□□□ 1.11
CTDSP1-213ENST00000496785 UBA1P22314 1058 aaKnown RBP21.98■■□□□ 1.11
CTDSP1-213ENST00000496785 TRIM60Q495X7 471 aa21.98■■□□□ 1.11
CTDSP1-213ENST00000496785 CELF3Q5SZQ8 465 aaKnown RBP21.98■■□□□ 1.11
CTDSP1-213ENST00000496785 JAKMIP3Q5VZ66 844 aa21.98■■□□□ 1.11
CTDSP1-213ENST00000496785 NECAB1Q8N987 351 aa21.98■■□□□ 1.11
CTDSP1-213ENST00000496785 PPTC7Q8NI37 304 aa21.98■■□□□ 1.11
CTDSP1-213ENST00000496785 MTG1Q9BT17 334 aaPredicted RBP21.98■■□□□ 1.11
CTDSP1-213ENST00000496785 BACH2Q9BYV9 841 aa21.98■■□□□ 1.11
CTDSP1-213ENST00000496785 UBIAD1Q9Y5Z9 338 aa21.98■■□□□ 1.11
CTDSP1-213ENST00000496785 ALPK3Q96L96 1907 aa21.98■■□□□ 1.11
CTDSP1-213ENST00000496785 DCDC2CA8MYV0 355 aa21.97■■□□□ 1.11
CTDSP1-213ENST00000496785 H0YGN5 161 aa21.97■■□□□ 1.11
CTDSP1-213ENST00000496785 ARVCFO00192 962 aa21.97■■□□□ 1.11
CTDSP1-213ENST00000496785 LARGE1O95461 756 aa21.97■■□□□ 1.11
CTDSP1-213ENST00000496785 MMP3P08254 477 aa21.97■■□□□ 1.11
CTDSP1-213ENST00000496785 PTGS1P23219 599 aa21.97■■□□□ 1.11
CTDSP1-213ENST00000496785 PURAQ00577 322 aaKnown RBP21.97■■□□□ 1.11
CTDSP1-213ENST00000496785 MTMR1Q13613 665 aa21.97■■□□□ 1.11
CTDSP1-213ENST00000496785 DGKDQ16760 1214 aa21.97■■□□□ 1.11
CTDSP1-213ENST00000496785 AFG1LQ8WV93 481 aa21.97■■□□□ 1.11
CTDSP1-213ENST00000496785 ZFP91Q96JP5 570 aaPredicted RBP21.97■■□□□ 1.11
CTDSP1-213ENST00000496785 TOX2Q96NM4 488 aa21.97■■□□□ 1.11
CTDSP1-213ENST00000496785 TMEM260Q9NX78 707 aa21.97■■□□□ 1.11
CTDSP1-213ENST00000496785 PCDHA4Q9UN74 947 aa21.97■■□□□ 1.11
CTDSP1-213ENST00000496785 TLR3O15455 904 aaKnown RBP21.96■■□□□ 1.11
CTDSP1-213ENST00000496785 ZNF76P36508 570 aa21.96■■□□□ 1.11
CTDSP1-213ENST00000496785 ARHGAP4P98171 946 aa21.96■■□□□ 1.11
CTDSP1-213ENST00000496785 ITGA7Q13683 1181 aa21.96■■□□□ 1.11
CTDSP1-213ENST00000496785 MYSM1Q5VVJ2 828 aa21.96■■□□□ 1.11
CTDSP1-213ENST00000496785 ANKRD33Q7Z3H0 272 aa21.96■■□□□ 1.11
CTDSP1-213ENST00000496785 DAGLBQ8NCG7 672 aa21.96■■□□□ 1.11
CTDSP1-213ENST00000496785 PGBD1Q96JS3 809 aa21.96■■□□□ 1.11
CTDSP1-213ENST00000496785 SPATA33Q96N06 139 aa21.96■■□□□ 1.11
CTDSP1-213ENST00000496785 MXRA8Q9BRK3 442 aa21.96■■□□□ 1.11
CTDSP1-213ENST00000496785 JADE2Q9NQC1 790 aa21.96■■□□□ 1.11
CTDSP1-213ENST00000496785 NOP56O00567 594 aaKnown RBP21.95■■□□□ 1.1
CTDSP1-213ENST00000496785 CTDNEP1O95476 244 aa21.95■■□□□ 1.1
CTDSP1-213ENST00000496785 ITGB5P18084 799 aa21.95■■□□□ 1.1
CTDSP1-213ENST00000496785 MCM2P49736 904 aa21.95■■□□□ 1.1
CTDSP1-213ENST00000496785 CEP55Q53EZ4 464 aa21.95■■□□□ 1.1
CTDSP1-213ENST00000496785 METTL7BQ6UX53 244 aa21.95■■□□□ 1.1
CTDSP1-213ENST00000496785 NIPA1Q7RTP0 329 aa21.95■■□□□ 1.1
CTDSP1-213ENST00000496785 BLIDQ8IZY5 108 aa21.95■■□□□ 1.1
CTDSP1-213ENST00000496785 NSUN7Q8NE18 718 aaKnown RBP21.95■■□□□ 1.1
CTDSP1-213ENST00000496785 LLPHQ9BRT6 129 aaKnown RBP21.95■■□□□ 1.1
CTDSP1-213ENST00000496785 KATNAL1Q9BW62 490 aa21.95■■□□□ 1.1
CTDSP1-213ENST00000496785 PQBP1O60828 265 aaKnown RBP21.94■■□□□ 1.1
CTDSP1-213ENST00000496785 PPFIA4O75335 1185 aa21.94■■□□□ 1.1
CTDSP1-213ENST00000496785 CYP3A4P08684 503 aa21.94■■□□□ 1.1
CTDSP1-213ENST00000496785 TLE2Q04725 743 aa21.94■■□□□ 1.1
CTDSP1-213ENST00000496785 SEMA3FQ13275 785 aa21.94■■□□□ 1.1
CTDSP1-213ENST00000496785 ALG1Q9BT22 464 aa21.94■■□□□ 1.1
CTDSP1-213ENST00000496785 BRMS1Q9HCU9 246 aa21.94■■□□□ 1.1
CTDSP1-213ENST00000496785 CLTBP09497 229 aa21.93■■□□□ 1.1
CTDSP1-213ENST00000496785 CDK7P50613 346 aa21.93■■□□□ 1.1
CTDSP1-213ENST00000496785 HMGN5P82970 282 aaKnown RBP21.93■■□□□ 1.1
CTDSP1-213ENST00000496785 SETQ01105 290 aaPredicted RBP21.93■■□□□ 1.1
CTDSP1-213ENST00000496785 SP2Q02086 613 aa21.93■■□□□ 1.1
CTDSP1-213ENST00000496785 TRIM29Q14134 588 aa21.93■■□□□ 1.1
CTDSP1-213ENST00000496785 SLC43A3Q8NBI5 491 aa21.93■■□□□ 1.1
CTDSP1-213ENST00000496785 PHF20Q9BVI0 1012 aa21.93■■□□□ 1.1
CTDSP1-213ENST00000496785 ZMYND8Q9ULU4 1186 aaPredicted RBP21.93■■□□□ 1.1
CTDSP1-213ENST00000496785 HOXD8P13378 290 aaPredicted RBP21.92■■□□□ 1.1
CTDSP1-213ENST00000496785 PTPN11Q06124 597 aaPredicted RBP21.92■■□□□ 1.1
CTDSP1-213ENST00000496785 HSDL1Q3SXM5 330 aa21.92■■□□□ 1.1
CTDSP1-213ENST00000496785 CYFIP1Q7L576 1253 aa21.92■■□□□ 1.1
CTDSP1-213ENST00000496785 KRT25Q7Z3Z0 450 aa21.92■■□□□ 1.1
CTDSP1-213ENST00000496785 CCDC83Q8IWF9 413 aa21.92■■□□□ 1.1
CTDSP1-213ENST00000496785 AIFM3Q96NN9 605 aa21.92■■□□□ 1.1
CTDSP1-213ENST00000496785 PRDM5Q9NQX1 630 aaPredicted RBP21.92■■□□□ 1.1
CTDSP1-213ENST00000496785 MEIS1O00470 390 aa21.91■■□□□ 1.1
CTDSP1-213ENST00000496785 NFRKBQ6P4R8 1299 aa21.91■■□□□ 1.1
CTDSP1-213ENST00000496785 RASGRP4Q8TDF6 673 aa21.91■■□□□ 1.1
CTDSP1-213ENST00000496785 CRYGNQ8WXF5 182 aa21.91■■□□□ 1.1
CTDSP1-213ENST00000496785 LBHD1Q9BQE6 289 aaPredicted RBP21.91■■□□□ 1.1
CTDSP1-213ENST00000496785 SDF4Q9BRK5 362 aa21.91■■□□□ 1.1
CTDSP1-213ENST00000496785 PDLIM7Q9NR12 457 aa21.91■■□□□ 1.1
CTDSP1-213ENST00000496785 KCNH7Q9NS40 1196 aa21.91■■□□□ 1.1
CTDSP1-213ENST00000496785 SUPT20HL2P0C7V6 817 aa21.9■■□□□ 1.1
CTDSP1-213ENST00000496785 FDPSP14324 419 aaKnown RBP21.9■■□□□ 1.1
CTDSP1-213ENST00000496785 KCNA2P16389 499 aa21.9■■□□□ 1.1
CTDSP1-213ENST00000496785 SYN1P17600 705 aa21.9■■□□□ 1.1
CTDSP1-213ENST00000496785 USP11P51784 963 aa21.9■■□□□ 1.1
CTDSP1-213ENST00000496785 PSMC6P62333 389 aa21.9■■□□□ 1.1
CTDSP1-213ENST00000496785 NONOQ15233 471 aaKnown RBP eCLIP21.9■■□□□ 1.12e-6■■■■■ 28
CTDSP1-213ENST00000496785 FAM126BQ8IXS8 530 aa21.9■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms