RNA–Protein interactions for RNA: ENST00000496744.5

ECM1-206, Transcript of extracellular matrix protein 1, humanhuman

TSL 3

Gene ECM1, Length 1,030 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1-206ENST00000496744 PPFIA4O75335 1185 aa12.55□□□□□ -0.4
ECM1-206ENST00000496744 STAM2O75886 525 aa12.55□□□□□ -0.4
ECM1-206ENST00000496744 GGPS1O95749 300 aa12.55□□□□□ -0.4
ECM1-206ENST00000496744 CASTP20810 708 aaKnown RBP12.55□□□□□ -0.4
ECM1-206ENST00000496744 EVCP57679 992 aa12.55□□□□□ -0.4
ECM1-206ENST00000496744 PTPN11Q06124 597 aaPredicted RBP12.55□□□□□ -0.4
ECM1-206ENST00000496744 DGKDQ16760 1214 aa12.55□□□□□ -0.4
ECM1-206ENST00000496744 UBE2SQ16763 222 aa12.55□□□□□ -0.4
ECM1-206ENST00000496744 RASIP1Q5U651 963 aa12.55□□□□□ -0.4
ECM1-206ENST00000496744 XRRA1Q6P2D8 792 aa12.55□□□□□ -0.4
ECM1-206ENST00000496744 HEATR3Q7Z4Q2 680 aa12.55□□□□□ -0.4
ECM1-206ENST00000496744 SESTD1Q86VW0 696 aa12.55□□□□□ -0.4
ECM1-206ENST00000496744 TMEM199Q8N511 208 aa12.55□□□□□ -0.4
ECM1-206ENST00000496744 CUL5Q93034 780 aa12.55□□□□□ -0.4
ECM1-206ENST00000496744 ZSWIM6Q9HCJ5 1215 aa12.55□□□□□ -0.4
ECM1-206ENST00000496744 TELO2Q9Y4R8 837 aa12.55□□□□□ -0.4
ECM1-206ENST00000496744 STXBP3O00186 592 aa12.54□□□□□ -0.4
ECM1-206ENST00000496744 F2P00734 622 aa12.54□□□□□ -0.4
ECM1-206ENST00000496744 SUPT20HL2P0C7V6 817 aa12.54□□□□□ -0.4
ECM1-206ENST00000496744 ACRP10323 421 aa12.54□□□□□ -0.4
ECM1-206ENST00000496744 ITGB5P18084 799 aa12.54□□□□□ -0.4
ECM1-206ENST00000496744 PSMA5P28066 241 aa12.54□□□□□ -0.4
ECM1-206ENST00000496744 CCL23P55773 120 aa12.54□□□□□ -0.4
ECM1-206ENST00000496744 PPIGQ13427 754 aaKnown RBP eCLIP12.54□□□□□ -0.4
ECM1-206ENST00000496744 FAM47CQ5HY64 1035 aa12.54□□□□□ -0.4
ECM1-206ENST00000496744 FAM109BQ6ICB4 259 aaPredicted RBP12.54□□□□□ -0.4
ECM1-206ENST00000496744 ZNF365Q70YC5 407 aa12.54□□□□□ -0.4
ECM1-206ENST00000496744 DEFB123Q8N688 67 aa12.54□□□□□ -0.4
ECM1-206ENST00000496744 RNPC3Q96LT9 517 aaKnown RBP12.54□□□□□ -0.4
ECM1-206ENST00000496744 SPATA33Q96N06 139 aa12.54□□□□□ -0.4
ECM1-206ENST00000496744 C16orf70Q9BSU1 422 aa12.54□□□□□ -0.4
ECM1-206ENST00000496744 IL23AQ9NPF7 189 aa12.54□□□□□ -0.4
ECM1-206ENST00000496744 MTMR10Q9NXD2 777 aa12.54□□□□□ -0.4
ECM1-206ENST00000496744 PCDHA6Q9UN73 950 aa12.54□□□□□ -0.4
ECM1-206ENST00000496744 PCDHA8Q9Y5H6 950 aa12.54□□□□□ -0.4
ECM1-206ENST00000496744 MYH7BA7E2Y1 1941 aa12.54□□□□□ -0.4
ECM1-206ENST00000496744 COL6A3P12111 3177 aa12.54□□□□□ -0.4
ECM1-206ENST00000496744 NID2Q14112 1375 aa12.54□□□□□ -0.4
ECM1-206ENST00000496744 FIBPO43427 364 aa12.53□□□□□ -0.4
ECM1-206ENST00000496744 ATP9AO75110 1047 aa12.53□□□□□ -0.4
ECM1-206ENST00000496744 ZNF286BP0CG31 522 aa12.53□□□□□ -0.4
ECM1-206ENST00000496744 PDIA3P30101 505 aaKnown RBP12.53□□□□□ -0.4
ECM1-206ENST00000496744 PSEN2P49810 448 aa12.53□□□□□ -0.4
ECM1-206ENST00000496744 METAP2P50579 478 aaKnown RBP eCLIP12.53□□□□□ -0.4
ECM1-206ENST00000496744 SMAD3P84022 425 aaKnown RBP12.53□□□□□ -0.4
ECM1-206ENST00000496744 FGD1P98174 961 aa12.53□□□□□ -0.4
ECM1-206ENST00000496744 TOB2Q14106 344 aaPredicted RBP12.53□□□□□ -0.4
ECM1-206ENST00000496744 HIC1Q14526 733 aa12.53□□□□□ -0.4
ECM1-206ENST00000496744 NTRK3Q16288 839 aa12.53□□□□□ -0.4
ECM1-206ENST00000496744 PKN1Q16512 942 aa12.53□□□□□ -0.4
ECM1-206ENST00000496744 GNPTABQ3T906 1256 aa12.53□□□□□ -0.4
ECM1-206ENST00000496744 GDF6Q6KF10 455 aaPredicted RBP12.53□□□□□ -0.4
ECM1-206ENST00000496744 RUFY3Q7L099 469 aa12.53□□□□□ -0.4
ECM1-206ENST00000496744 SCLYQ96I15 445 aa12.53□□□□□ -0.4
ECM1-206ENST00000496744 SENP7Q9BQF6 1050 aa12.53□□□□□ -0.4
ECM1-206ENST00000496744 TM6SF1Q9BZW5 370 aa12.53□□□□□ -0.4
ECM1-206ENST00000496744 MLXIPQ9HAP2 919 aa12.53□□□□□ -0.4
ECM1-206ENST00000496744 RIC8AQ9NPQ8 531 aa12.53□□□□□ -0.4
ECM1-206ENST00000496744 BARHL2Q9NY43 387 aa12.53□□□□□ -0.4
ECM1-206ENST00000496744 HDAC6Q9UBN7 1215 aa12.53□□□□□ -0.4
ECM1-206ENST00000496744 UBIAD1Q9Y5Z9 338 aa12.53□□□□□ -0.4
ECM1-206ENST00000496744 CCDC196A0A1B0GTZ2 297 aa12.52□□□□□ -0.41
ECM1-206ENST00000496744 ADAMTS3O15072 1205 aa12.52□□□□□ -0.41
ECM1-206ENST00000496744 CENPBP07199 599 aaPredicted RBP12.52□□□□□ -0.41
ECM1-206ENST00000496744 CLK2P49760 499 aaKnown RBP12.52□□□□□ -0.41
ECM1-206ENST00000496744 NAPAP54920 295 aa12.52□□□□□ -0.41
ECM1-206ENST00000496744 CHMP4BP1P59074 171 aa12.52□□□□□ -0.41
ECM1-206ENST00000496744 NEDD9Q14511 834 aa12.52□□□□□ -0.41
ECM1-206ENST00000496744 MFSD10Q14728 455 aa12.52□□□□□ -0.41
ECM1-206ENST00000496744 GPNMBQ14956 572 aa12.52□□□□□ -0.41
ECM1-206ENST00000496744 PTGISQ16647 500 aa12.52□□□□□ -0.41
ECM1-206ENST00000496744 PFKFB3Q16875 520 aaPredicted RBP12.52□□□□□ -0.41
ECM1-206ENST00000496744 KIAA0753Q2KHM9 967 aa12.52□□□□□ -0.41
ECM1-206ENST00000496744 PPP1R18Q6NYC8 613 aa12.52□□□□□ -0.41
ECM1-206ENST00000496744 METTL7BQ6UX53 244 aa12.52□□□□□ -0.41
ECM1-206ENST00000496744 CYFIP1Q7L576 1253 aa12.52□□□□□ -0.41
ECM1-206ENST00000496744 TEX2Q8IWB9 1127 aa12.52□□□□□ -0.41
ECM1-206ENST00000496744 HERVK_113Q902F9 699 aa12.52□□□□□ -0.41
ECM1-206ENST00000496744 DHX38Q92620 1227 aaKnown RBP12.52□□□□□ -0.41
ECM1-206ENST00000496744 GPR20Q99678 358 aa12.52□□□□□ -0.41
ECM1-206ENST00000496744 CXXC1Q9P0U4 656 aaPredicted RBP12.52□□□□□ -0.41
ECM1-206ENST00000496744 GTF2IRD1Q9UHL9 959 aa12.52□□□□□ -0.41
ECM1-206ENST00000496744 NAP1L2Q9ULW6 460 aaPredicted RBP12.52□□□□□ -0.41
ECM1-206ENST00000496744 SMCO2A6NFE2 343 aa12.51□□□□□ -0.41
ECM1-206ENST00000496744 SPDYE3A6NKU9 549 aa12.51□□□□□ -0.41
ECM1-206ENST00000496744 hCG_1984214I3L0E3 225 aa12.51□□□□□ -0.41
ECM1-206ENST00000496744 PITPNM1O00562 1244 aa12.51□□□□□ -0.41
ECM1-206ENST00000496744 PRPF3O43395 683 aaKnown RBP12.51□□□□□ -0.41
ECM1-206ENST00000496744 IQCF3P0C7M6 154 aa12.51□□□□□ -0.41
ECM1-206ENST00000496744 SCG2P13521 617 aa12.51□□□□□ -0.41
ECM1-206ENST00000496744 KCNA2P16389 499 aa12.51□□□□□ -0.41
ECM1-206ENST00000496744 ZNF200P98182 395 aaPredicted RBP12.51□□□□□ -0.41
ECM1-206ENST00000496744 PSRC1Q6PGN9 363 aaPredicted RBP12.51□□□□□ -0.41
ECM1-206ENST00000496744 ZNF713Q8N859 430 aaPredicted RBP12.51□□□□□ -0.41
ECM1-206ENST00000496744 CYP2W1Q8TAV3 490 aa12.51□□□□□ -0.41
ECM1-206ENST00000496744 PHKBQ93100 1093 aa12.51□□□□□ -0.41
ECM1-206ENST00000496744 GPRASP2Q96D09 838 aa12.51□□□□□ -0.41
ECM1-206ENST00000496744 ALG1Q9BT22 464 aa12.51□□□□□ -0.41
ECM1-206ENST00000496744 TTYH1Q9H313 450 aaPredicted RBP12.51□□□□□ -0.41
ECM1-206ENST00000496744 NCOA5Q9HCD5 579 aaKnown RBP12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms