RNA–Protein interactions for RNA: ENST00000496677.5

CLDN12-213, Transcript of claudin 12, humanhuman

TSL 1 (best)

Gene CLDN12, Length 1,098 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12-213ENST00000496677 HSDL1Q3SXM5 330 aa14.28□□□□□ -0.12
CLDN12-213ENST00000496677 FAM47CQ5HY64 1035 aa14.28□□□□□ -0.12
CLDN12-213ENST00000496677 GDF6Q6KF10 455 aaPredicted RBP14.28□□□□□ -0.12
CLDN12-213ENST00000496677 APOA5Q6Q788 366 aa14.28□□□□□ -0.12
CLDN12-213ENST00000496677 TCEANC2Q96MN5 208 aa14.28□□□□□ -0.12
CLDN12-213ENST00000496677 CDX2Q99626 313 aaPredicted RBP14.28□□□□□ -0.12
CLDN12-213ENST00000496677 FAM217BQ9NTX9 383 aaPredicted RBP14.28□□□□□ -0.12
CLDN12-213ENST00000496677 CHD9Q3L8U1 2897 aa14.27□□□□□ -0.12
CLDN12-213ENST00000496677 hCG_1642624A0A1W2PR95 340 aa14.27□□□□□ -0.13
CLDN12-213ENST00000496677 GRXCR1A8MXD5 290 aa14.27□□□□□ -0.13
CLDN12-213ENST00000496677 PITPNM1O00562 1244 aa14.27□□□□□ -0.13
CLDN12-213ENST00000496677 GGPS1O95749 300 aa14.27□□□□□ -0.13
CLDN12-213ENST00000496677 F2P00734 622 aa14.27□□□□□ -0.13
CLDN12-213ENST00000496677 UBA1P22314 1058 aaKnown RBP14.27□□□□□ -0.13
CLDN12-213ENST00000496677 PSEN2P49810 448 aa14.27□□□□□ -0.13
CLDN12-213ENST00000496677 RPUSD2Q8IZ73 545 aaKnown RBP14.27□□□□□ -0.13
CLDN12-213ENST00000496677 DHX38Q92620 1227 aaKnown RBP14.27□□□□□ -0.13
CLDN12-213ENST00000496677 C16orf70Q9BSU1 422 aa14.27□□□□□ -0.13
CLDN12-213ENST00000496677 SEC63Q9UGP8 760 aaKnown RBP14.27□□□□□ -0.13
CLDN12-213ENST00000496677 IQCF3P0C7M6 154 aa14.26□□□□□ -0.13
CLDN12-213ENST00000496677 DNAJB2P25686 324 aa14.26□□□□□ -0.13
CLDN12-213ENST00000496677 HSPA4P34932 840 aa14.26□□□□□ -0.13
CLDN12-213ENST00000496677 PBX2P40425 430 aa14.26□□□□□ -0.13
CLDN12-213ENST00000496677 HIC1Q14526 733 aa14.26□□□□□ -0.13
CLDN12-213ENST00000496677 KRT32Q14532 448 aa14.26□□□□□ -0.13
CLDN12-213ENST00000496677 MFSD10Q14728 455 aa14.26□□□□□ -0.13
CLDN12-213ENST00000496677 GPNMBQ14956 572 aa14.26□□□□□ -0.13
CLDN12-213ENST00000496677 PTGISQ16647 500 aa14.26□□□□□ -0.13
CLDN12-213ENST00000496677 PCNX4Q63HM2 1172 aa14.26□□□□□ -0.13
CLDN12-213ENST00000496677 XRRA1Q6P2D8 792 aa14.26□□□□□ -0.13
CLDN12-213ENST00000496677 MICU3Q86XE3 530 aa14.26□□□□□ -0.13
CLDN12-213ENST00000496677 CCDC82Q8N4S0 544 aa14.26□□□□□ -0.13
CLDN12-213ENST00000496677 SPATA33Q96N06 139 aa14.26□□□□□ -0.13
CLDN12-213ENST00000496677 PBX4Q9BYU1 374 aa14.26□□□□□ -0.13
CLDN12-213ENST00000496677 PSTPIP2Q9H939 334 aa14.26□□□□□ -0.13
CLDN12-213ENST00000496677 RTEL1Q9NZ71 1219 aa14.26□□□□□ -0.13
CLDN12-213ENST00000496677 HDAC6Q9UBN7 1215 aa14.26□□□□□ -0.13
CLDN12-213ENST00000496677 GTF2IRD1Q9UHL9 959 aa14.26□□□□□ -0.13
CLDN12-213ENST00000496677 CNTNAP5Q8WYK1 1306 aa14.25□□□□□ -0.13
CLDN12-213ENST00000496677 SORBS3O60504 671 aa14.25□□□□□ -0.13
CLDN12-213ENST00000496677 PFKMP08237 780 aa14.25□□□□□ -0.13
CLDN12-213ENST00000496677 ZNF286BP0CG31 522 aa14.25□□□□□ -0.13
CLDN12-213ENST00000496677 RFC2P35250 354 aa14.25□□□□□ -0.13
CLDN12-213ENST00000496677 RCAN1P53805 252 aa14.25□□□□□ -0.13
CLDN12-213ENST00000496677 RBL2Q08999 1139 aa14.25□□□□□ -0.13
CLDN12-213ENST00000496677 KIAA0753Q2KHM9 967 aa14.25□□□□□ -0.13
CLDN12-213ENST00000496677 OTOP2Q7RTS6 562 aa14.25□□□□□ -0.13
CLDN12-213ENST00000496677 FBXL16Q8N461 479 aa14.25□□□□□ -0.13
CLDN12-213ENST00000496677 SMARCC2Q8TAQ2 1214 aa14.25□□□□□ -0.13
CLDN12-213ENST00000496677 CUL5Q93034 780 aa14.25□□□□□ -0.13
CLDN12-213ENST00000496677 RBM28Q9NW13 759 aaKnown RBP14.25□□□□□ -0.13
CLDN12-213ENST00000496677 TELO2Q9Y4R8 837 aa14.25□□□□□ -0.13
CLDN12-213ENST00000496677 SNX14Q9Y5W7 946 aa14.25□□□□□ -0.13
CLDN12-213ENST00000496677 SCN5AQ14524 2016 aa14.24□□□□□ -0.13
CLDN12-213ENST00000496677 ZBTB43O43298 467 aa14.24□□□□□ -0.13
CLDN12-213ENST00000496677 FIBPO43427 364 aa14.24□□□□□ -0.13
CLDN12-213ENST00000496677 HMGB1P09429 215 aaKnown RBP14.24□□□□□ -0.13
CLDN12-213ENST00000496677 CPA1P15085 419 aa14.24□□□□□ -0.13
CLDN12-213ENST00000496677 CDC27P30260 824 aa14.24□□□□□ -0.13
CLDN12-213ENST00000496677 HOXC8P31273 242 aa14.24□□□□□ -0.13
CLDN12-213ENST00000496677 CHMP4BP1P59074 171 aa14.24□□□□□ -0.13
CLDN12-213ENST00000496677 BFSP2Q13515 415 aa14.24□□□□□ -0.13
CLDN12-213ENST00000496677 GRIN2CQ14957 1233 aa14.24□□□□□ -0.13
CLDN12-213ENST00000496677 TRIM71Q2Q1W2 868 aaKnown RBP14.24□□□□□ -0.13
CLDN12-213ENST00000496677 GNPTABQ3T906 1256 aa14.24□□□□□ -0.13
CLDN12-213ENST00000496677 TYW1BQ6NUM6 668 aa14.24□□□□□ -0.13
CLDN12-213ENST00000496677 METTL7BQ6UX53 244 aa14.24□□□□□ -0.13
CLDN12-213ENST00000496677 SYNE3Q6ZMZ3 975 aa14.24□□□□□ -0.13
CLDN12-213ENST00000496677 TIFAQ96CG3 184 aa14.24□□□□□ -0.13
CLDN12-213ENST00000496677 SENP7Q9BQF6 1050 aa14.24□□□□□ -0.13
CLDN12-213ENST00000496677 ALG1Q9BT22 464 aa14.24□□□□□ -0.13
CLDN12-213ENST00000496677 KATNAL1Q9BW62 490 aa14.24□□□□□ -0.13
CLDN12-213ENST00000496677 ZNF576Q9H609 170 aa14.24□□□□□ -0.13
CLDN12-213ENST00000496677 MLXIPQ9HAP2 919 aa14.24□□□□□ -0.13
CLDN12-213ENST00000496677 A0A0C4DFX4 3053 aa14.23□□□□□ -0.13
CLDN12-213ENST00000496677 TET1Q8NFU7 2136 aa14.23□□□□□ -0.13
CLDN12-213ENST00000496677 ITGB5P18084 799 aa14.23□□□□□ -0.13
CLDN12-213ENST00000496677 ZNF200P98182 395 aaPredicted RBP14.23□□□□□ -0.13
CLDN12-213ENST00000496677 PTK7Q13308 1070 aa14.23□□□□□ -0.13
CLDN12-213ENST00000496677 NEDD9Q14511 834 aa14.23□□□□□ -0.13
CLDN12-213ENST00000496677 UBE2SQ16763 222 aa14.23□□□□□ -0.13
CLDN12-213ENST00000496677 RTN1Q16799 776 aa14.23□□□□□ -0.13
CLDN12-213ENST00000496677 WWC2Q6AWC2 1192 aa14.23□□□□□ -0.13
CLDN12-213ENST00000496677 TRAF7Q6Q0C0 670 aa14.23□□□□□ -0.13
CLDN12-213ENST00000496677 DEFB128Q7Z7B8 93 aa14.23□□□□□ -0.13
CLDN12-213ENST00000496677 TEX2Q8IWB9 1127 aa14.23□□□□□ -0.13
CLDN12-213ENST00000496677 C7orf31Q8N865 590 aa14.23□□□□□ -0.13
CLDN12-213ENST00000496677 RETREG2Q8NC44 543 aa14.23□□□□□ -0.13
CLDN12-213ENST00000496677 SLC17A8Q8NDX2 589 aa14.23□□□□□ -0.13
CLDN12-213ENST00000496677 CAGE1Q8TC20 777 aa14.23□□□□□ -0.13
CLDN12-213ENST00000496677 AFAP1L1Q8TED9 768 aa14.23□□□□□ -0.13
CLDN12-213ENST00000496677 MYLIPQ8WY64 445 aa14.23□□□□□ -0.13
CLDN12-213ENST00000496677 WNT8BQ93098 351 aa14.23□□□□□ -0.13
CLDN12-213ENST00000496677 GPR20Q99678 358 aa14.23□□□□□ -0.13
CLDN12-213ENST00000496677 AGXT2Q9BYV1 514 aa14.23□□□□□ -0.13
CLDN12-213ENST00000496677 PCDHA6Q9UN73 950 aa14.23□□□□□ -0.13
CLDN12-213ENST00000496677 PCDHA8Q9Y5H6 950 aa14.23□□□□□ -0.13
CLDN12-213ENST00000496677 UBIAD1Q9Y5Z9 338 aa14.23□□□□□ -0.13
CLDN12-213ENST00000496677 V9GY48 417 aaPredicted RBP14.23□□□□□ -0.13
CLDN12-213ENST00000496677 TRIP12Q14669 1992 aaPredicted RBP14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms