RNA–Protein interactions for RNA: ENST00000496569.1

HDLBP-246, Transcript of high density lipoprotein binding protein, humanhuman

TSL 4

Gene HDLBP, Length 374 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-246ENST00000496569 TRAF1Q13077 416 aa14.06□□□□□ -0.16
HDLBP-246ENST00000496569 BRDTQ58F21 947 aaPredicted RBP14.06□□□□□ -0.16
HDLBP-246ENST00000496569 TMEM240Q5SV17 173 aa14.06□□□□□ -0.16
HDLBP-246ENST00000496569 DEFB123Q8N688 67 aa14.06□□□□□ -0.16
HDLBP-246ENST00000496569 CUL5Q93034 780 aa14.06□□□□□ -0.16
HDLBP-246ENST00000496569 RBM28Q9NW13 759 aaKnown RBP14.06□□□□□ -0.16
HDLBP-246ENST00000496569 V9GY48 417 aaPredicted RBP14.06□□□□□ -0.16
HDLBP-246ENST00000496569 GRXCR1A8MXD5 290 aa14.05□□□□□ -0.16
HDLBP-246ENST00000496569 STXBP3O00186 592 aa14.05□□□□□ -0.16
HDLBP-246ENST00000496569 DTNBO60941 627 aa14.05□□□□□ -0.16
HDLBP-246ENST00000496569 PSEN2P49810 448 aa14.05□□□□□ -0.16
HDLBP-246ENST00000496569 METAP2P50579 478 aaKnown RBP eCLIP14.05□□□□□ -0.16
HDLBP-246ENST00000496569 NAPAP54920 295 aa14.05□□□□□ -0.16
HDLBP-246ENST00000496569 CELF3Q5SZQ8 465 aaKnown RBP14.05□□□□□ -0.16
HDLBP-246ENST00000496569 MYSM1Q5VVJ2 828 aa14.05□□□□□ -0.16
HDLBP-246ENST00000496569 GDF6Q6KF10 455 aaPredicted RBP14.05□□□□□ -0.16
HDLBP-246ENST00000496569 ZNF365Q70YC5 407 aa14.05□□□□□ -0.16
HDLBP-246ENST00000496569 SAMD3Q8N6K7 520 aa14.05□□□□□ -0.16
HDLBP-246ENST00000496569 VWCEQ96DN2 955 aa14.05□□□□□ -0.16
HDLBP-246ENST00000496569 SPATA33Q96N06 139 aa14.05□□□□□ -0.16
HDLBP-246ENST00000496569 INPP4AQ96PE3 977 aaPredicted RBP14.05□□□□□ -0.16
HDLBP-246ENST00000496569 CTAGE1Q96RT6 745 aa14.05□□□□□ -0.16
HDLBP-246ENST00000496569 UPF3BQ9BZI7 483 aaKnown RBP14.05□□□□□ -0.16
HDLBP-246ENST00000496569 PSTPIP2Q9H939 334 aa14.05□□□□□ -0.16
HDLBP-246ENST00000496569 NCOA5Q9HCD5 579 aaKnown RBP14.05□□□□□ -0.16
HDLBP-246ENST00000496569 TMEM260Q9NX78 707 aa14.05□□□□□ -0.16
HDLBP-246ENST00000496569 PKD2L1Q9P0L9 805 aa14.05□□□□□ -0.16
HDLBP-246ENST00000496569 WDR81Q562E7 1941 aa14.05□□□□□ -0.16
HDLBP-246ENST00000496569 PIK3CDO00329 1044 aa14.04□□□□□ -0.16
HDLBP-246ENST00000496569 CENPBP07199 599 aaPredicted RBP14.04□□□□□ -0.16
HDLBP-246ENST00000496569 HMGB1P09429 215 aaKnown RBP14.04□□□□□ -0.16
HDLBP-246ENST00000496569 CCT2P78371 535 aaKnown RBP14.04□□□□□ -0.16
HDLBP-246ENST00000496569 ZNF200P98182 395 aaPredicted RBP14.04□□□□□ -0.16
HDLBP-246ENST00000496569 PPIGQ13427 754 aaKnown RBP eCLIP14.04□□□□□ -0.16
HDLBP-246ENST00000496569 HIC1Q14526 733 aa14.04□□□□□ -0.16
HDLBP-246ENST00000496569 DGKDQ16760 1214 aa14.04□□□□□ -0.16
HDLBP-246ENST00000496569 CYFIP1Q7L576 1253 aa14.04□□□□□ -0.16
HDLBP-246ENST00000496569 TRIM50Q86XT4 487 aa14.04□□□□□ -0.16
HDLBP-246ENST00000496569 TMEM199Q8N511 208 aa14.04□□□□□ -0.16
HDLBP-246ENST00000496569 PPTC7Q8NI37 304 aa14.04□□□□□ -0.16
HDLBP-246ENST00000496569 PHKBQ93100 1093 aa14.04□□□□□ -0.16
HDLBP-246ENST00000496569 USP26Q9BXU7 913 aa14.04□□□□□ -0.16
HDLBP-246ENST00000496569 PCDHA6Q9UN73 950 aa14.04□□□□□ -0.16
HDLBP-246ENST00000496569 PCDHA8Q9Y5H6 950 aa14.04□□□□□ -0.16
HDLBP-246ENST00000496569 SIP14410 1827 aa14.04□□□□□ -0.16
HDLBP-246ENST00000496569 EYSQ5T1H1 3165 aa14.04□□□□□ -0.16
HDLBP-246ENST00000496569 KPNA6O60684 536 aa14.03□□□□□ -0.16
HDLBP-246ENST00000496569 LAMC2Q13753 1193 aa14.03□□□□□ -0.16
HDLBP-246ENST00000496569 TOB2Q14106 344 aaPredicted RBP14.03□□□□□ -0.16
HDLBP-246ENST00000496569 MFSD10Q14728 455 aa14.03□□□□□ -0.16
HDLBP-246ENST00000496569 PCNX4Q63HM2 1172 aa14.03□□□□□ -0.16
HDLBP-246ENST00000496569 NFRKBQ6P4R8 1299 aa14.03□□□□□ -0.16
HDLBP-246ENST00000496569 DEFB128Q7Z7B8 93 aa14.03□□□□□ -0.16
HDLBP-246ENST00000496569 DHX38Q92620 1227 aaKnown RBP14.03□□□□□ -0.16
HDLBP-246ENST00000496569 WNT8BQ93098 351 aa14.03□□□□□ -0.16
HDLBP-246ENST00000496569 EMID1Q96A84 441 aaPredicted RBP14.03□□□□□ -0.16
HDLBP-246ENST00000496569 MLXIPQ9HAP2 919 aa14.03□□□□□ -0.16
HDLBP-246ENST00000496569 IL23AQ9NPF7 189 aa14.03□□□□□ -0.16
HDLBP-246ENST00000496569 MTMR10Q9NXD2 777 aa14.03□□□□□ -0.16
HDLBP-246ENST00000496569 CXXC1Q9P0U4 656 aaPredicted RBP14.03□□□□□ -0.16
HDLBP-246ENST00000496569 HDAC6Q9UBN7 1215 aa14.03□□□□□ -0.16
HDLBP-246ENST00000496569 LOXHD1Q8IVV2 1947 aa14.03□□□□□ -0.16
HDLBP-246ENST00000496569 NID2Q14112 1375 aa14.02□□□□□ -0.17
HDLBP-246ENST00000496569 SPATA31C2B4DYI2 1134 aa14.02□□□□□ -0.17
HDLBP-246ENST00000496569 ATP9AO75110 1047 aa14.02□□□□□ -0.17
HDLBP-246ENST00000496569 F2P00734 622 aa14.02□□□□□ -0.17
HDLBP-246ENST00000496569 ITGB5P18084 799 aa14.02□□□□□ -0.17
HDLBP-246ENST00000496569 ICAM3P32942 547 aa14.02□□□□□ -0.17
HDLBP-246ENST00000496569 PTGISQ16647 500 aa14.02□□□□□ -0.17
HDLBP-246ENST00000496569 KIAA0753Q2KHM9 967 aa14.02□□□□□ -0.17
HDLBP-246ENST00000496569 OTOP2Q7RTS6 562 aa14.02□□□□□ -0.17
HDLBP-246ENST00000496569 UIMC1Q96RL1 719 aa14.02□□□□□ -0.17
HDLBP-246ENST00000496569 AGXT2Q9BYV1 514 aa14.02□□□□□ -0.17
HDLBP-246ENST00000496569 TTYH1Q9H313 450 aaPredicted RBP14.02□□□□□ -0.17
HDLBP-246ENST00000496569 CHD9Q3L8U1 2897 aa14.01□□□□□ -0.17
HDLBP-246ENST00000496569 SPDYE3A6NKU9 549 aa14.01□□□□□ -0.17
HDLBP-246ENST00000496569 HAS3O00219 553 aa14.01□□□□□ -0.17
HDLBP-246ENST00000496569 FIBPO43427 364 aa14.01□□□□□ -0.17
HDLBP-246ENST00000496569 LGALS2P05162 132 aa14.01□□□□□ -0.17
HDLBP-246ENST00000496569 HOXD8P13378 290 aaPredicted RBP14.01□□□□□ -0.17
HDLBP-246ENST00000496569 PBX2P40425 430 aa14.01□□□□□ -0.17
HDLBP-246ENST00000496569 ADCY7P51828 1080 aa14.01□□□□□ -0.17
HDLBP-246ENST00000496569 STK3Q13188 491 aa14.01□□□□□ -0.17
HDLBP-246ENST00000496569 PKN1Q16512 942 aa14.01□□□□□ -0.17
HDLBP-246ENST00000496569 GNPTABQ3T906 1256 aa14.01□□□□□ -0.17
HDLBP-246ENST00000496569 UTP14CQ5TAP6 766 aaKnown RBP14.01□□□□□ -0.17
HDLBP-246ENST00000496569 KCNV1Q6PIU1 500 aa14.01□□□□□ -0.17
HDLBP-246ENST00000496569 RUFY3Q7L099 469 aa14.01□□□□□ -0.17
HDLBP-246ENST00000496569 CYP2W1Q8TAV3 490 aa14.01□□□□□ -0.17
HDLBP-246ENST00000496569 GUCD1Q96NT3 240 aa14.01□□□□□ -0.17
HDLBP-246ENST00000496569 C16orf70Q9BSU1 422 aa14.01□□□□□ -0.17
HDLBP-246ENST00000496569 ANO3Q9BYT9 981 aa14.01□□□□□ -0.17
HDLBP-246ENST00000496569 ZSWIM6Q9HCJ5 1215 aa14.01□□□□□ -0.17
HDLBP-246ENST00000496569 RIC8AQ9NPQ8 531 aa14.01□□□□□ -0.17
HDLBP-246ENST00000496569 BARHL2Q9NY43 387 aa14.01□□□□□ -0.17
HDLBP-246ENST00000496569 GTF2IRD1Q9UHL9 959 aa14.01□□□□□ -0.17
HDLBP-246ENST00000496569 NOD1Q9Y239 953 aa14.01□□□□□ -0.17
HDLBP-246ENST00000496569 MICAL3Q7RTP6 2002 aa14.01□□□□□ -0.17
HDLBP-246ENST00000496569 MYH9P35579 1960 aaKnown RBP14□□□□□ -0.17
HDLBP-246ENST00000496569 SMCO2A6NFE2 343 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms