RNA–Protein interactions for RNA: ENST00000496393.2

NVL-223, Transcript of nuclear VCP-like, human

TSL 3

Gene NVL, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NVL-223	ENST00000496393	CPVL	Q9H3G5	476 aa		9.23	□□□□□ -0.93
NVL-223	ENST00000496393	PRR33	A8MZF0	331 aa		9.22	□□□□□ -0.93
NVL-223	ENST00000496393	SORBS3	O60504	671 aa		9.22	□□□□□ -0.93
NVL-223	ENST00000496393	ZNF286B	P0CG31	522 aa		9.22	□□□□□ -0.93
NVL-223	ENST00000496393	CKB	P12277	381 aa		9.22	□□□□□ -0.93
NVL-223	ENST00000496393	EDNRB	P24530	442 aa		9.22	□□□□□ -0.93
NVL-223	ENST00000496393	ERVK-21	P61565	698 aa		9.22	□□□□□ -0.93
NVL-223	ENST00000496393	ARHGAP1	Q07960	439 aa		9.22	□□□□□ -0.93
NVL-223	ENST00000496393	LY6K	Q17RY6	165 aa		9.22	□□□□□ -0.93
NVL-223	ENST00000496393	CSPP1	Q1MSJ5	1256 aa		9.22	□□□□□ -0.93
NVL-223	ENST00000496393	LRRFIP1	Q32MZ4	808 aa	Known RBP	9.22	□□□□□ -0.93
NVL-223	ENST00000496393	LEXM	Q3ZCV2	418 aa		9.22	□□□□□ -0.93
NVL-223	ENST00000496393	BTNL9	Q6UXG8	535 aa		9.22	□□□□□ -0.93
NVL-223	ENST00000496393	LIN28B	Q6ZN17	250 aa	Known RBP eCLIP	9.22	□□□□□ -0.93
NVL-223	ENST00000496393	OXER1	Q8TDS5	423 aa		9.22	□□□□□ -0.93
NVL-223	ENST00000496393	KAT2B	Q92831	832 aa		9.22	□□□□□ -0.93
NVL-223	ENST00000496393	WNT8B	Q93098	351 aa		9.22	□□□□□ -0.93
NVL-223	ENST00000496393	MPHOSPH6	Q99547	160 aa	Known RBP	9.22	□□□□□ -0.93
NVL-223	ENST00000496393	RAD9A	Q99638	391 aa		9.22	□□□□□ -0.93
NVL-223	ENST00000496393	HDAC6	Q9UBN7	1215 aa		9.22	□□□□□ -0.93
NVL-223	ENST00000496393	VPS9D1	Q9Y2B5	631 aa		9.22	□□□□□ -0.93
NVL-223	ENST00000496393	PPAN-P2RY11	A0A0B4J1V8	794 aa	Predicted RBP	9.21	□□□□□ -0.94
NVL-223	ENST00000496393	LOC102724159	A0A0B4J2E5	919 aa		9.21	□□□□□ -0.94
NVL-223	ENST00000496393	GH1	P01241	217 aa		9.21	□□□□□ -0.94
NVL-223	ENST00000496393	CXCL10	P02778	98 aa		9.21	□□□□□ -0.94
NVL-223	ENST00000496393	GOLGA8H	P0CJ92	632 aa		9.21	□□□□□ -0.94
NVL-223	ENST00000496393	PDHB	P11177	359 aa		9.21	□□□□□ -0.94
NVL-223	ENST00000496393	TOP1	P11387	765 aa	Known RBP	9.21	□□□□□ -0.94
NVL-223	ENST00000496393	MRE11	P49959	708 aa		9.21	□□□□□ -0.94
NVL-223	ENST00000496393	PTPN5	P54829	565 aa		9.21	□□□□□ -0.94
NVL-223	ENST00000496393	HAND2	P61296	217 aa		9.21	□□□□□ -0.94
NVL-223	ENST00000496393	ZNF200	P98182	395 aa	Predicted RBP	9.21	□□□□□ -0.94
NVL-223	ENST00000496393	MBTPS1	Q14703	1052 aa		9.21	□□□□□ -0.94
NVL-223	ENST00000496393	PWP2	Q15269	919 aa	Known RBP	9.21	□□□□□ -0.94
NVL-223	ENST00000496393	ZNF618	Q5T7W0	954 aa		9.21	□□□□□ -0.94
NVL-223	ENST00000496393	CCDC62	Q6P9F0	684 aa		9.21	□□□□□ -0.94
NVL-223	ENST00000496393	MYOCD	Q8IZQ8	938 aa		9.21	□□□□□ -0.94
NVL-223	ENST00000496393	C7orf31	Q8N865	590 aa		9.21	□□□□□ -0.94
NVL-223	ENST00000496393	PI4K2B	Q8TCG2	481 aa		9.21	□□□□□ -0.94
NVL-223	ENST00000496393	TBC1D5	Q92609	795 aa		9.21	□□□□□ -0.94
NVL-223	ENST00000496393	ANKS1A	Q92625	1134 aa		9.21	□□□□□ -0.94
NVL-223	ENST00000496393	CHMP4B	Q9H444	224 aa	Known RBP	9.21	□□□□□ -0.94
NVL-223	ENST00000496393	LMCD1	Q9NZU5	365 aa		9.21	□□□□□ -0.94
NVL-223	ENST00000496393	COL20A1	Q9P218	1284 aa		9.21	□□□□□ -0.94
NVL-223	ENST00000496393	GTF2IRD1	Q9UHL9	959 aa		9.21	□□□□□ -0.94
NVL-223	ENST00000496393	ABHD14A-ACY1	A0A1B0GW23	586 aa		9.2	□□□□□ -0.94
NVL-223	ENST00000496393	GRXCR2	A6NFK2	248 aa		9.2	□□□□□ -0.94
NVL-223	ENST00000496393	ORC4	O43929	436 aa		9.2	□□□□□ -0.94
NVL-223	ENST00000496393	CSPG5	O95196	566 aa		9.2	□□□□□ -0.94
NVL-223	ENST00000496393	NOV	P48745	357 aa		9.2	□□□□□ -0.94
NVL-223	ENST00000496393	ZNF543	Q08ER8	600 aa		9.2	□□□□□ -0.94
NVL-223	ENST00000496393	IKBKE	Q14164	716 aa		9.2	□□□□□ -0.94
NVL-223	ENST00000496393	MFSD10	Q14728	455 aa		9.2	□□□□□ -0.94
NVL-223	ENST00000496393	SESTD1	Q86VW0	696 aa		9.2	□□□□□ -0.94
NVL-223	ENST00000496393	DNER	Q8NFT8	737 aa		9.2	□□□□□ -0.94
NVL-223	ENST00000496393	TAAR1	Q96RJ0	339 aa		9.2	□□□□□ -0.94
NVL-223	ENST00000496393	DCTPP1	Q9H773	170 aa		9.2	□□□□□ -0.94
NVL-223	ENST00000496393	WDR19	Q8NEZ3	1342 aa		9.2	□□□□□ -0.94
NVL-223	ENST00000496393	MICAL3	Q7RTP6	2002 aa		9.19	□□□□□ -0.94
NVL-223	ENST00000496393		B4DLN1	442 aa		9.19	□□□□□ -0.94
NVL-223	ENST00000496393	DCX	O43602	365 aa		9.19	□□□□□ -0.94
NVL-223	ENST00000496393	LGR5	O75473	907 aa		9.19	□□□□□ -0.94
NVL-223	ENST00000496393	UPP2	O95045	317 aa		9.19	□□□□□ -0.94
NVL-223	ENST00000496393	ALAD	P13716	330 aa		9.19	□□□□□ -0.94
NVL-223	ENST00000496393	EIF2AK2	P19525	551 aa	Known RBP	9.19	□□□□□ -0.94
NVL-223	ENST00000496393	CAST	P20810	708 aa	Known RBP	9.19	□□□□□ -0.94
NVL-223	ENST00000496393	MRPL12	P52815	198 aa	Known RBP	9.19	□□□□□ -0.94
NVL-223	ENST00000496393	NHLH1	Q02575	133 aa		9.19	□□□□□ -0.94
NVL-223	ENST00000496393	HIC1	Q14526	733 aa		9.19	□□□□□ -0.94
NVL-223	ENST00000496393	CLUL1	Q15846	466 aa		9.19	□□□□□ -0.94
NVL-223	ENST00000496393	CDC37	Q16543	378 aa	Predicted RBP	9.19	□□□□□ -0.94
NVL-223	ENST00000496393	DGKD	Q16760	1214 aa		9.19	□□□□□ -0.94
NVL-223	ENST00000496393	KIAA0753	Q2KHM9	967 aa		9.19	□□□□□ -0.94
NVL-223	ENST00000496393	TRIM71	Q2Q1W2	868 aa	Known RBP	9.19	□□□□□ -0.94
NVL-223	ENST00000496393	TCEAL5	Q5H9L2	206 aa		9.19	□□□□□ -0.94
NVL-223	ENST00000496393	TRAF7	Q6Q0C0	670 aa		9.19	□□□□□ -0.94
NVL-223	ENST00000496393	DHX37	Q8IY37	1157 aa	Known RBP	9.19	□□□□□ -0.94
NVL-223	ENST00000496393	ZNF454	Q8N9F8	522 aa		9.19	□□□□□ -0.94
NVL-223	ENST00000496393	DBF4B	Q8NFT6	615 aa		9.19	□□□□□ -0.94
NVL-223	ENST00000496393	SYTL5	Q8TDW5	730 aa	Predicted RBP	9.19	□□□□□ -0.94
NVL-223	ENST00000496393	FBXL18	Q96ME1	805 aa		9.19	□□□□□ -0.94
NVL-223	ENST00000496393	ZKSCAN3	Q9BRR0	538 aa		9.19	□□□□□ -0.94
NVL-223	ENST00000496393	UBA5	Q9GZZ9	404 aa		9.19	□□□□□ -0.94
NVL-223	ENST00000496393	ANAPC4	Q9UJX5	808 aa		9.19	□□□□□ -0.94
NVL-223	ENST00000496393	MRVI1	Q9Y6F6	885 aa		9.19	□□□□□ -0.94
NVL-223	ENST00000496393	TTC41P	Q6P2S7	1318 aa		9.19	□□□□□ -0.94
NVL-223	ENST00000496393	KIAA1217	Q5T5P2	1943 aa		9.19	□□□□□ -0.94
NVL-223	ENST00000496393	F2	P00734	622 aa		9.18	□□□□□ -0.94
NVL-223	ENST00000496393	AMH	P03971	560 aa		9.18	□□□□□ -0.94
NVL-223	ENST00000496393	CTSH	P09668	335 aa		9.18	□□□□□ -0.94
NVL-223	ENST00000496393	THPO	P40225	353 aa		9.18	□□□□□ -0.94
NVL-223	ENST00000496393	ZP2	Q05996	745 aa		9.18	□□□□□ -0.94
NVL-223	ENST00000496393	RBL2	Q08999	1139 aa		9.18	□□□□□ -0.94
NVL-223	ENST00000496393	PTK7	Q13308	1070 aa		9.18	□□□□□ -0.94
NVL-223	ENST00000496393	GPM6B	Q13491	265 aa		9.18	□□□□□ -0.94
NVL-223	ENST00000496393	PTPRO	Q16827	1216 aa		9.18	□□□□□ -0.94
NVL-223	ENST00000496393	EPC2	Q52LR7	807 aa		9.18	□□□□□ -0.94
NVL-223	ENST00000496393	TIGD5	Q53EQ6	642 aa		9.18	□□□□□ -0.94
NVL-223	ENST00000496393	TBC1D10C	Q8IV04	446 aa		9.18	□□□□□ -0.94
NVL-223	ENST00000496393	BANK1	Q8NDB2	785 aa		9.18	□□□□□ -0.94

Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms