RNA–Protein interactions for RNA: ENST00000496340.1

NEPRO-224, Transcript of nucleolus and neural progenitor protein, humanhuman

TSL 4

Gene NEPRO, Length 520 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEPRO-224ENST00000496340 ACRP10323 421 aa12.53□□□□□ -0.4
NEPRO-224ENST00000496340 HOXD8P13378 290 aaPredicted RBP12.53□□□□□ -0.4
NEPRO-224ENST00000496340 RAG1P15918 1043 aa12.53□□□□□ -0.4
NEPRO-224ENST00000496340 CCND2P30279 289 aa12.53□□□□□ -0.4
NEPRO-224ENST00000496340 CLK2P49760 499 aaKnown RBP12.53□□□□□ -0.4
NEPRO-224ENST00000496340 ZNF200P98182 395 aaPredicted RBP12.53□□□□□ -0.4
NEPRO-224ENST00000496340 LRIT3Q3SXY7 679 aa12.53□□□□□ -0.4
NEPRO-224ENST00000496340 PCNX4Q63HM2 1172 aa12.53□□□□□ -0.4
NEPRO-224ENST00000496340 FAM109BQ6ICB4 259 aaPredicted RBP12.53□□□□□ -0.4
NEPRO-224ENST00000496340 SYNE3Q6ZMZ3 975 aa12.53□□□□□ -0.4
NEPRO-224ENST00000496340 Q7L0L9 218 aa12.53□□□□□ -0.4
NEPRO-224ENST00000496340 SMARCC2Q8TAQ2 1214 aa12.53□□□□□ -0.4
NEPRO-224ENST00000496340 WNT8BQ93098 351 aa12.53□□□□□ -0.4
NEPRO-224ENST00000496340 EMID1Q96A84 441 aaPredicted RBP12.53□□□□□ -0.4
NEPRO-224ENST00000496340 LBHD1Q9BQE6 289 aaPredicted RBP12.53□□□□□ -0.4
NEPRO-224ENST00000496340 NOC4LQ9BVI4 516 aaKnown RBP12.53□□□□□ -0.4
NEPRO-224ENST00000496340 PRKAG2Q9UGJ0 569 aa12.53□□□□□ -0.4
NEPRO-224ENST00000496340 PCDHA6Q9UN73 950 aa12.53□□□□□ -0.4
NEPRO-224ENST00000496340 PCDHA8Q9Y5H6 950 aa12.53□□□□□ -0.4
NEPRO-224ENST00000496340 B4DLN1 442 aa12.52□□□□□ -0.41
NEPRO-224ENST00000496340 HAS3O00219 553 aa12.52□□□□□ -0.41
NEPRO-224ENST00000496340 EPB41L2O43491 1005 aaKnown RBP12.52□□□□□ -0.41
NEPRO-224ENST00000496340 ZEB2O60315 1214 aa12.52□□□□□ -0.41
NEPRO-224ENST00000496340 ICAM3P32942 547 aa12.52□□□□□ -0.41
NEPRO-224ENST00000496340 MRPL12P52815 198 aaKnown RBP12.52□□□□□ -0.41
NEPRO-224ENST00000496340 RCAN1P53805 252 aa12.52□□□□□ -0.41
NEPRO-224ENST00000496340 CCL23P55773 120 aa12.52□□□□□ -0.41
NEPRO-224ENST00000496340 CHMP4BP1P59074 171 aa12.52□□□□□ -0.41
NEPRO-224ENST00000496340 GPNMBQ14956 572 aa12.52□□□□□ -0.41
NEPRO-224ENST00000496340 PFKFB3Q16875 520 aaPredicted RBP12.52□□□□□ -0.41
NEPRO-224ENST00000496340 GDF6Q6KF10 455 aaPredicted RBP12.52□□□□□ -0.41
NEPRO-224ENST00000496340 MFSD5Q6N075 450 aa12.52□□□□□ -0.41
NEPRO-224ENST00000496340 DHX37Q8IY37 1157 aaKnown RBP12.52□□□□□ -0.41
NEPRO-224ENST00000496340 PPTC7Q8NI37 304 aa12.52□□□□□ -0.41
NEPRO-224ENST00000496340 DHX38Q92620 1227 aaKnown RBP12.52□□□□□ -0.41
NEPRO-224ENST00000496340 SCLYQ96I15 445 aa12.52□□□□□ -0.41
NEPRO-224ENST00000496340 MPHOSPH6Q99547 160 aaKnown RBP12.52□□□□□ -0.41
NEPRO-224ENST00000496340 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.52□□□□□ -0.413e-8■■■□□ 15.9
NEPRO-224ENST00000496340 C16orf70Q9BSU1 422 aa12.52□□□□□ -0.41
NEPRO-224ENST00000496340 TM6SF1Q9BZW5 370 aa12.52□□□□□ -0.41
NEPRO-224ENST00000496340 RIC8AQ9NPQ8 531 aa12.52□□□□□ -0.41
NEPRO-224ENST00000496340 POLR3EQ9NVU0 708 aa12.52□□□□□ -0.41
NEPRO-224ENST00000496340 BARHL2Q9NY43 387 aa12.52□□□□□ -0.41
NEPRO-224ENST00000496340 SCN5AQ14524 2016 aa12.51□□□□□ -0.41
NEPRO-224ENST00000496340 SMCO2A6NFE2 343 aa12.51□□□□□ -0.41
NEPRO-224ENST00000496340 PSMA5P28066 241 aa12.51□□□□□ -0.41
NEPRO-224ENST00000496340 NAPAP54920 295 aa12.51□□□□□ -0.41
NEPRO-224ENST00000496340 FGD1P98174 961 aa12.51□□□□□ -0.41
NEPRO-224ENST00000496340 TRAF1Q13077 416 aa12.51□□□□□ -0.41
NEPRO-224ENST00000496340 LAMC2Q13753 1193 aa12.51□□□□□ -0.41
NEPRO-224ENST00000496340 TMEM240Q5SV17 173 aa12.51□□□□□ -0.41
NEPRO-224ENST00000496340 CYFIP1Q7L576 1253 aa12.51□□□□□ -0.41
NEPRO-224ENST00000496340 SPATA33Q96N06 139 aa12.51□□□□□ -0.41
NEPRO-224ENST00000496340 AIFM3Q96NN9 605 aa12.51□□□□□ -0.41
NEPRO-224ENST00000496340 HDAC6Q9UBN7 1215 aa12.51□□□□□ -0.41
NEPRO-224ENST00000496340 TPCN1Q9ULQ1 816 aa12.51□□□□□ -0.41
NEPRO-224ENST00000496340 UBIAD1Q9Y5Z9 338 aa12.51□□□□□ -0.41
NEPRO-224ENST00000496340 PRPF3O43395 683 aaKnown RBP12.5□□□□□ -0.41
NEPRO-224ENST00000496340 LARGE1O95461 756 aa12.5□□□□□ -0.41
NEPRO-224ENST00000496340 F2P00734 622 aa12.5□□□□□ -0.41
NEPRO-224ENST00000496340 ARP10275 920 aa12.5□□□□□ -0.41
NEPRO-224ENST00000496340 SCG2P13521 617 aa12.5□□□□□ -0.41
NEPRO-224ENST00000496340 KCNA2P16389 499 aa12.5□□□□□ -0.41
NEPRO-224ENST00000496340 FPGSQ05932 587 aa12.5□□□□□ -0.41
NEPRO-224ENST00000496340 STK3Q13188 491 aa12.5□□□□□ -0.41
NEPRO-224ENST00000496340 TCTN1Q2MV58 587 aa12.5□□□□□ -0.41
NEPRO-224ENST00000496340 NFRKBQ6P4R8 1299 aa12.5□□□□□ -0.41
NEPRO-224ENST00000496340 TRIM50Q86XT4 487 aa12.5□□□□□ -0.41
NEPRO-224ENST00000496340 RASGRP4Q8TDF6 673 aa12.5□□□□□ -0.41
NEPRO-224ENST00000496340 CRYGNQ8WXF5 182 aa12.5□□□□□ -0.41
NEPRO-224ENST00000496340 IL17RAQ96F46 866 aa12.5□□□□□ -0.41
NEPRO-224ENST00000496340 UIMC1Q96RL1 719 aa12.5□□□□□ -0.41
NEPRO-224ENST00000496340 GPR20Q99678 358 aa12.5□□□□□ -0.41
NEPRO-224ENST00000496340 ALG1Q9BT22 464 aa12.5□□□□□ -0.41
NEPRO-224ENST00000496340 OSBPL7Q9BZF2 842 aa12.5□□□□□ -0.41
NEPRO-224ENST00000496340 HIPK3Q9H422 1215 aa12.5□□□□□ -0.41
NEPRO-224ENST00000496340 PDRG1Q9NUG6 133 aa12.5□□□□□ -0.41
NEPRO-224ENST00000496340 CXXC1Q9P0U4 656 aaPredicted RBP12.5□□□□□ -0.41
NEPRO-224ENST00000496340 CYP46A1Q9Y6A2 500 aa12.5□□□□□ -0.41
NEPRO-224ENST00000496340 MROH7Q68CQ1 1323 aa12.5□□□□□ -0.41
NEPRO-224ENST00000496340 TRIP12Q14669 1992 aaPredicted RBP12.5□□□□□ -0.41
NEPRO-224ENST00000496340 CHD9Q3L8U1 2897 aa12.49□□□□□ -0.41
NEPRO-224ENST00000496340 GRXCR1A8MXD5 290 aa12.49□□□□□ -0.41
NEPRO-224ENST00000496340 CTDNEP1O95476 244 aa12.49□□□□□ -0.41
NEPRO-224ENST00000496340 TGFB3P10600 412 aa12.49□□□□□ -0.41
NEPRO-224ENST00000496340 IFNAR1P17181 557 aa12.49□□□□□ -0.41
NEPRO-224ENST00000496340 PSEN2P49810 448 aa12.49□□□□□ -0.41
NEPRO-224ENST00000496340 NPY5RQ15761 445 aa12.49□□□□□ -0.41
NEPRO-224ENST00000496340 DGKDQ16760 1214 aa12.49□□□□□ -0.41
NEPRO-224ENST00000496340 C8orf34Q49A92 452 aa12.49□□□□□ -0.41
NEPRO-224ENST00000496340 FAM47CQ5HY64 1035 aa12.49□□□□□ -0.41
NEPRO-224ENST00000496340 RASIP1Q5U651 963 aa12.49□□□□□ -0.41
NEPRO-224ENST00000496340 JAKMIP3Q5VZ66 844 aa12.49□□□□□ -0.41
NEPRO-224ENST00000496340 TRAF7Q6Q0C0 670 aa12.49□□□□□ -0.41
NEPRO-224ENST00000496340 ZNF365Q70YC5 407 aa12.49□□□□□ -0.41
NEPRO-224ENST00000496340 CUL5Q93034 780 aa12.49□□□□□ -0.41
NEPRO-224ENST00000496340 PKD2L1Q9P0L9 805 aa12.49□□□□□ -0.41
NEPRO-224ENST00000496340 VPS54Q9P1Q0 977 aa12.49□□□□□ -0.41
NEPRO-224ENST00000496340 TET1Q8NFU7 2136 aa12.49□□□□□ -0.41
NEPRO-224ENST00000496340 GSTTP1A0A1W2PQM5 241 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms