RNA–Protein interactions for RNA: ENST00000496323.1

SPTBN1-205, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTBN1, Length 2,225 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-205ENST00000496323 CNKSR2Q8WXI2 1034 aa15.31■□□□□ 0.04
SPTBN1-205ENST00000496323 HPS3Q969F9 1004 aa15.31■□□□□ 0.04
SPTBN1-205ENST00000496323 EHMT1Q9H9B1 1298 aa15.31■□□□□ 0.04
SPTBN1-205ENST00000496323 EXOC1Q9NV70 894 aa15.31■□□□□ 0.04
SPTBN1-205ENST00000496323 POTEFA5A3E0 1075 aa15.31■□□□□ 0.04
SPTBN1-205ENST00000496323 CBFA2T2O43439 604 aa15.31■□□□□ 0.04
SPTBN1-205ENST00000496323 PSMD10O75832 226 aa15.31■□□□□ 0.04
SPTBN1-205ENST00000496323 POTEIP0CG38 1075 aa15.31■□□□□ 0.04
SPTBN1-205ENST00000496323 ITGB5P18084 799 aa15.31■□□□□ 0.04
SPTBN1-205ENST00000496323 PTPN21Q16825 1174 aa15.31■□□□□ 0.04
SPTBN1-205ENST00000496323 DPY19L2Q6NUT2 758 aa15.31■□□□□ 0.04
SPTBN1-205ENST00000496323 POTEGQ6S5H5 508 aa15.31■□□□□ 0.04
SPTBN1-205ENST00000496323 POTEEQ6S8J3 1075 aa15.31■□□□□ 0.04
SPTBN1-205ENST00000496323 CATSPERGQ6ZRH7 1159 aa15.31■□□□□ 0.04
SPTBN1-205ENST00000496323 LRRC8AQ8IWT6 810 aa15.31■□□□□ 0.04
SPTBN1-205ENST00000496323 C17orf53Q8N3J3 647 aaPredicted RBP15.31■□□□□ 0.04
SPTBN1-205ENST00000496323 DDX12PQ92771 950 aa15.31■□□□□ 0.04
SPTBN1-205ENST00000496323 SLC5A5Q92911 643 aa15.31■□□□□ 0.04
SPTBN1-205ENST00000496323 TRERF1Q96PN7 1200 aa15.31■□□□□ 0.04
SPTBN1-205ENST00000496323 IMPACTQ9P2X3 320 aa15.31■□□□□ 0.04
SPTBN1-205ENST00000496323 PVALEFA0A1B0GWK0 134 aa15.3■□□□□ 0.04
SPTBN1-205ENST00000496323 ARP10275 920 aa15.3■□□□□ 0.04
SPTBN1-205ENST00000496323 RPS6P62753 249 aaKnown RBP15.3■□□□□ 0.04
SPTBN1-205ENST00000496323 COG2Q14746 738 aa15.3■□□□□ 0.04
SPTBN1-205ENST00000496323 SH3D19Q5HYK7 790 aa15.3■□□□□ 0.04
SPTBN1-205ENST00000496323 UNC13DQ70J99 1090 aa15.3■□□□□ 0.04
SPTBN1-205ENST00000496323 OTOP1Q7RTM1 612 aa15.3■□□□□ 0.04
SPTBN1-205ENST00000496323 KIAA0895Q8NCT3 520 aa15.3■□□□□ 0.04
SPTBN1-205ENST00000496323 KIAA1524Q8TCG1 905 aa15.3■□□□□ 0.04
SPTBN1-205ENST00000496323 DNAJC19Q96DA6 116 aa15.3■□□□□ 0.04
SPTBN1-205ENST00000496323 ZNF214Q9UL59 606 aaPredicted RBP15.3■□□□□ 0.04
SPTBN1-205ENST00000496323 TRIM49BA6NDI0 452 aa15.29■□□□□ 0.04
SPTBN1-205ENST00000496323 RPA1P27694 616 aa15.29■□□□□ 0.04
SPTBN1-205ENST00000496323 EPHX2P34913 555 aa15.29■□□□□ 0.04
SPTBN1-205ENST00000496323 EHHADHQ08426 723 aa15.29■□□□□ 0.04
SPTBN1-205ENST00000496323 HAUS3Q68CZ6 603 aa15.29■□□□□ 0.04
SPTBN1-205ENST00000496323 USP50Q70EL3 339 aaPredicted RBP15.29■□□□□ 0.04
SPTBN1-205ENST00000496323 VSTM4Q8IW00 320 aa15.29■□□□□ 0.04
SPTBN1-205ENST00000496323 TMOD4Q9NZQ9 345 aa15.29■□□□□ 0.04
SPTBN1-205ENST00000496323 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.29■□□□□ 0.04
SPTBN1-205ENST00000496323 CTDP1Q9Y5B0 961 aaPredicted RBP15.29■□□□□ 0.04
SPTBN1-205ENST00000496323 PLA2G4BP0C869 781 aa15.29■□□□□ 0.04
SPTBN1-205ENST00000496323 PSMC6P62333 389 aa15.29■□□□□ 0.04
SPTBN1-205ENST00000496323 NR1I3Q14994 352 aa15.29■□□□□ 0.04
SPTBN1-205ENST00000496323 ERMNQ8TAM6 284 aa15.29■□□□□ 0.04
SPTBN1-205ENST00000496323 PURBQ96QR8 312 aaKnown RBP15.29■□□□□ 0.04
SPTBN1-205ENST00000496323 TAAR1Q96RJ0 339 aa15.29■□□□□ 0.04
SPTBN1-205ENST00000496323 MXRA8Q9BRK3 442 aa15.29■□□□□ 0.04
SPTBN1-205ENST00000496323 MAP3K20Q9NYL2 800 aaKnown RBP15.29■□□□□ 0.04
SPTBN1-205ENST00000496323 PNMA2Q9UL42 364 aa15.29■□□□□ 0.04
SPTBN1-205ENST00000496323 FRMPD4Q14CM0 1322 aa15.29■□□□□ 0.04
SPTBN1-205ENST00000496323 A0A1B0GTH6 734 aa15.28■□□□□ 0.04
SPTBN1-205ENST00000496323 PPP1R12BO60237 982 aaPredicted RBP15.28■□□□□ 0.04
SPTBN1-205ENST00000496323 SLC12A3P55017 1021 aa15.28■□□□□ 0.04
SPTBN1-205ENST00000496323 TMEM132BQ14DG7 1078 aa15.28■□□□□ 0.04
SPTBN1-205ENST00000496323 LRCH2Q5VUJ6 765 aa15.28■□□□□ 0.04
SPTBN1-205ENST00000496323 ARMCX5Q6P1M9 558 aa15.28■□□□□ 0.04
SPTBN1-205ENST00000496323 CCDC47Q96A33 483 aaKnown RBP15.28■□□□□ 0.04
SPTBN1-205ENST00000496323 DHTKD1Q96HY7 919 aaPredicted RBP15.28■□□□□ 0.04
SPTBN1-205ENST00000496323 LRRC27Q9C0I9 530 aa15.28■□□□□ 0.04
SPTBN1-205ENST00000496323 SLC39A2Q9NP94 309 aa15.28■□□□□ 0.04
SPTBN1-205ENST00000496323 RABGAP1Q9Y3P9 1069 aa15.28■□□□□ 0.04
SPTBN1-205ENST00000496323 OAZ1P54368 228 aa15.28■□□□□ 0.04
SPTBN1-205ENST00000496323 MRPS9P82933 396 aaKnown RBP15.28■□□□□ 0.04
SPTBN1-205ENST00000496323 SETQ01105 290 aaPredicted RBP15.28■□□□□ 0.04
SPTBN1-205ENST00000496323 PPP2R5CQ13362 524 aa15.28■□□□□ 0.04
SPTBN1-205ENST00000496323 COBLL1Q53SF7 1204 aa15.28■□□□□ 0.04
SPTBN1-205ENST00000496323 TTI2Q6NXR4 508 aa15.28■□□□□ 0.04
SPTBN1-205ENST00000496323 MOB2Q70IA6 237 aa15.28■□□□□ 0.04
SPTBN1-205ENST00000496323 IRF2BP1Q8IU81 584 aa15.28■□□□□ 0.04
SPTBN1-205ENST00000496323 SAMD3Q8N6K7 520 aa15.28■□□□□ 0.04
SPTBN1-205ENST00000496323 RBM46Q8TBY0 533 aaKnown RBP15.28■□□□□ 0.04
SPTBN1-205ENST00000496323 ZC3H15Q8WU90 426 aaKnown RBP15.28■□□□□ 0.04
SPTBN1-205ENST00000496323 CDCA5Q96FF9 252 aa15.28■□□□□ 0.04
SPTBN1-205ENST00000496323 HSD17B14Q9BPX1 270 aa15.28■□□□□ 0.04
SPTBN1-205ENST00000496323 EIF2AK1Q9BQI3 630 aaKnown RBP15.28■□□□□ 0.04
SPTBN1-205ENST00000496323 POLR3CQ9BUI4 534 aaPredicted RBP15.28■□□□□ 0.04
SPTBN1-205ENST00000496323 RNF146Q9NTX7 359 aa15.28■□□□□ 0.04
SPTBN1-205ENST00000496323 RGL1Q9NZL6 768 aa15.28■□□□□ 0.04
SPTBN1-205ENST00000496323 PHIPQ8WWQ0 1821 aa15.27■□□□□ 0.04
SPTBN1-205ENST00000496323 GLTPD2A6NH11 291 aa15.27■□□□□ 0.04
SPTBN1-205ENST00000496323 SPDYE16A6NNV3 312 aaPredicted RBP15.27■□□□□ 0.04
SPTBN1-205ENST00000496323 PSMA7O14818 248 aa15.27■□□□□ 0.04
SPTBN1-205ENST00000496323 SSBP05455 408 aaKnown RBP eCLIP15.27■□□□□ 0.04
SPTBN1-205ENST00000496323 CYP11B2P19099 503 aa15.27■□□□□ 0.04
SPTBN1-205ENST00000496323 GSDMDP57764 484 aa15.27■□□□□ 0.04
SPTBN1-205ENST00000496323 CYP4A11Q02928 519 aa15.27■□□□□ 0.04
SPTBN1-205ENST00000496323 STIM1Q13586 685 aa15.27■□□□□ 0.04
SPTBN1-205ENST00000496323 GPR162Q16538 588 aa15.27■□□□□ 0.04
SPTBN1-205ENST00000496323 ARSHQ5FYA8 562 aa15.27■□□□□ 0.04
SPTBN1-205ENST00000496323 TREML2Q5T2D2 321 aa15.27■□□□□ 0.04
SPTBN1-205ENST00000496323 PCNX4Q63HM2 1172 aa15.27■□□□□ 0.04
SPTBN1-205ENST00000496323 SNRNP48Q6IEG0 339 aaKnown RBP15.27■□□□□ 0.04
SPTBN1-205ENST00000496323 B3GNT9Q6UX72 402 aa15.27■□□□□ 0.04
SPTBN1-205ENST00000496323 RNF207Q6ZRF8 634 aa15.27■□□□□ 0.04
SPTBN1-205ENST00000496323 ZNF577Q9BSK1 485 aa15.27■□□□□ 0.04
SPTBN1-205ENST00000496323 ADD3Q9UEY8 706 aaKnown RBP15.27■□□□□ 0.04
SPTBN1-205ENST00000496323 CSADQ9Y600 493 aa15.27■□□□□ 0.04
SPTBN1-205ENST00000496323 NPHP3-ACAD11A0A0J9YXS1 232 aa15.27■□□□□ 0.03
SPTBN1-205ENST00000496323 LRRC10BA6NIK2 292 aa15.27■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms