RNA–Protein interactions for RNA: ENST00000496310.1

UBP1-213, Transcript of upstream binding protein 1, humanhuman

TSL 4

Gene UBP1, Length 544 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBP1-213ENST00000496310 UBA5Q9GZZ9 404 aa8.38□□□□□ -1.07
UBP1-213ENST00000496310 NSUN3Q9H649 340 aaKnown RBP8.38□□□□□ -1.07
UBP1-213ENST00000496310 TOMM22Q9NS69 142 aa8.38□□□□□ -1.07
UBP1-213ENST00000496310 ZBTB40Q9NUA8 1239 aa8.38□□□□□ -1.07
UBP1-213ENST00000496310 ZFHX2Q9C0A1 2572 aaPredicted RBP8.38□□□□□ -1.07
UBP1-213ENST00000496310 EVPLQ92817 2033 aa8.37□□□□□ -1.07
UBP1-213ENST00000496310 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.37□□□□□ -1.07
UBP1-213ENST00000496310 TMEM221A6NGB7 291 aa8.37□□□□□ -1.07
UBP1-213ENST00000496310 M0R296 226 aa8.37□□□□□ -1.07
UBP1-213ENST00000496310 STXBP3O00186 592 aa8.37□□□□□ -1.07
UBP1-213ENST00000496310 TBX10O75333 385 aa8.37□□□□□ -1.07
UBP1-213ENST00000496310 EIF2AK2P19525 551 aaKnown RBP8.37□□□□□ -1.07
UBP1-213ENST00000496310 CASTP20810 708 aaKnown RBP8.37□□□□□ -1.07
UBP1-213ENST00000496310 CTNNB1P35222 781 aa8.37□□□□□ -1.07
UBP1-213ENST00000496310 VCPP55072 806 aaKnown RBP8.37□□□□□ -1.07
UBP1-213ENST00000496310 HYAL1Q12794 435 aa8.37□□□□□ -1.07
UBP1-213ENST00000496310 PTK7Q13308 1070 aa8.37□□□□□ -1.07
UBP1-213ENST00000496310 PUS10Q3MIT2 529 aaKnown RBP8.37□□□□□ -1.07
UBP1-213ENST00000496310 TIGD5Q53EQ6 642 aa8.37□□□□□ -1.07
UBP1-213ENST00000496310 BTNL9Q6UXG8 535 aa8.37□□□□□ -1.07
UBP1-213ENST00000496310 SESTD1Q86VW0 696 aa8.37□□□□□ -1.07
UBP1-213ENST00000496310 SP7Q8TDD2 431 aaPredicted RBP8.37□□□□□ -1.07
UBP1-213ENST00000496310 OTUD7AQ8TE49 926 aaPredicted RBP8.37□□□□□ -1.07
UBP1-213ENST00000496310 PBXIP1Q96AQ6 731 aa8.37□□□□□ -1.07
UBP1-213ENST00000496310 BCAS3Q9H6U6 928 aa8.37□□□□□ -1.07
UBP1-213ENST00000496310 DDX41Q9UJV9 622 aaKnown RBP8.37□□□□□ -1.07
UBP1-213ENST00000496310 SUPT16HQ9Y5B9 1047 aaKnown RBP8.37□□□□□ -1.07
UBP1-213ENST00000496310 COL4A6Q14031 1691 aa8.37□□□□□ -1.07
UBP1-213ENST00000496310 FAM186AA6NE01 2351 aa8.36□□□□□ -1.07
UBP1-213ENST00000496310 CACNA1HO95180 2353 aa8.36□□□□□ -1.07
UBP1-213ENST00000496310 RIF1Q5UIP0 2472 aaKnown RBP8.36□□□□□ -1.07
UBP1-213ENST00000496310 RSPH10B2B2RC85 870 aa8.36□□□□□ -1.07
UBP1-213ENST00000496310 GFRA3O60609 400 aa8.36□□□□□ -1.07
UBP1-213ENST00000496310 RSPH10BP0C881 870 aa8.36□□□□□ -1.07
UBP1-213ENST00000496310 PDHBP11177 359 aa8.36□□□□□ -1.07
UBP1-213ENST00000496310 HNRNPUQ00839 825 aaKnown RBP eCLIP8.36□□□□□ -1.07
UBP1-213ENST00000496310 RBL2Q08999 1139 aa8.36□□□□□ -1.07
UBP1-213ENST00000496310 SMAD2Q15796 467 aaKnown RBP8.36□□□□□ -1.07
UBP1-213ENST00000496310 DGKDQ16760 1214 aa8.36□□□□□ -1.07
UBP1-213ENST00000496310 HERC4Q5GLZ8 1057 aaPredicted RBP8.36□□□□□ -1.07
UBP1-213ENST00000496310 FBXO11Q86XK2 927 aa8.36□□□□□ -1.07
UBP1-213ENST00000496310 EDAQ92838 391 aa8.36□□□□□ -1.07
UBP1-213ENST00000496310 GPKOWQ92917 476 aaPredicted RBP eCLIP8.36□□□□□ -1.07
UBP1-213ENST00000496310 ZKSCAN3Q9BRR0 538 aa8.36□□□□□ -1.07
UBP1-213ENST00000496310 FSD1Q9BTV5 496 aa8.36□□□□□ -1.07
UBP1-213ENST00000496310 UPF3BQ9BZI7 483 aaKnown RBP8.36□□□□□ -1.07
UBP1-213ENST00000496310 KCNH6Q9H252 994 aa8.36□□□□□ -1.07
UBP1-213ENST00000496310 ALG13Q9NP73 1137 aaKnown RBP8.36□□□□□ -1.07
UBP1-213ENST00000496310 PRKAG3Q9UGI9 489 aa8.36□□□□□ -1.07
UBP1-213ENST00000496310 CTNNA3Q9UI47 895 aa8.36□□□□□ -1.07
UBP1-213ENST00000496310 FNDC1Q4ZHG4 1894 aaPredicted RBP8.36□□□□□ -1.07
UBP1-213ENST00000496310 HAS3O00219 553 aa8.35□□□□□ -1.07
UBP1-213ENST00000496310 TREHO43280 583 aa8.35□□□□□ -1.07
UBP1-213ENST00000496310 ST18O60284 1047 aa8.35□□□□□ -1.07
UBP1-213ENST00000496310 EFCAB14O75071 495 aa8.35□□□□□ -1.07
UBP1-213ENST00000496310 RGS20O76081 388 aa8.35□□□□□ -1.07
UBP1-213ENST00000496310 ZFYP08048 801 aaPredicted RBP8.35□□□□□ -1.07
UBP1-213ENST00000496310 TOP1P11387 765 aaKnown RBP8.35□□□□□ -1.07
UBP1-213ENST00000496310 MYCLP12524 364 aaPredicted RBP8.35□□□□□ -1.07
UBP1-213ENST00000496310 HAND2P61296 217 aa8.35□□□□□ -1.07
UBP1-213ENST00000496310 RBM10P98175 930 aaKnown RBP8.35□□□□□ -1.07
UBP1-213ENST00000496310 SP2Q02086 613 aa8.35□□□□□ -1.07
UBP1-213ENST00000496310 ZNF543Q08ER8 600 aa8.35□□□□□ -1.07
UBP1-213ENST00000496310 COL19A1Q14993 1142 aa8.35□□□□□ -1.07
UBP1-213ENST00000496310 PLEKHG4Q58EX7 1191 aa8.35□□□□□ -1.07
UBP1-213ENST00000496310 ZMYM1Q5SVZ6 1142 aa8.35□□□□□ -1.07
UBP1-213ENST00000496310 C20orf194Q5TEA3 1177 aa8.35□□□□□ -1.07
UBP1-213ENST00000496310 TRIM67Q6ZTA4 783 aa8.35□□□□□ -1.07
UBP1-213ENST00000496310 ADGRD2Q7Z7M1 963 aa8.35□□□□□ -1.07
UBP1-213ENST00000496310 DNERQ8NFT8 737 aa8.35□□□□□ -1.07
UBP1-213ENST00000496310 SYTL5Q8TDW5 730 aaPredicted RBP8.35□□□□□ -1.07
UBP1-213ENST00000496310 TOP1MTQ969P6 601 aa8.35□□□□□ -1.07
UBP1-213ENST00000496310 MPHOSPH6Q99547 160 aaKnown RBP8.35□□□□□ -1.07
UBP1-213ENST00000496310 IFIH1Q9BYX4 1025 aaKnown RBP8.35□□□□□ -1.07
UBP1-213ENST00000496310 VAT1LQ9HCJ6 419 aa8.35□□□□□ -1.07
UBP1-213ENST00000496310 CD207Q9UJ71 328 aa8.35□□□□□ -1.07
UBP1-213ENST00000496310 FAM50BQ9Y247 325 aa8.35□□□□□ -1.07
UBP1-213ENST00000496310 TELO2Q9Y4R8 837 aa8.35□□□□□ -1.07
UBP1-213ENST00000496310 PCDHGC5Q9Y5F6 944 aa8.35□□□□□ -1.07
UBP1-213ENST00000496310 MRVI1Q9Y6F6 885 aa8.35□□□□□ -1.07
UBP1-213ENST00000496310 LOC102724159A0A0B4J2E5 919 aa8.34□□□□□ -1.07
UBP1-213ENST00000496310 H0Y858 1186 aa8.34□□□□□ -1.07
UBP1-213ENST00000496310 PARNO95453 639 aaKnown RBP8.34□□□□□ -1.07
UBP1-213ENST00000496310 F2P00734 622 aa8.34□□□□□ -1.07
UBP1-213ENST00000496310 PDGFBP01127 241 aaPredicted RBP8.34□□□□□ -1.07
UBP1-213ENST00000496310 LINC00271P0C7V0 271 aa8.34□□□□□ -1.07
UBP1-213ENST00000496310 IBSPP21815 317 aaPredicted RBP8.34□□□□□ -1.07
UBP1-213ENST00000496310 SP100P23497 879 aaPredicted RBP8.34□□□□□ -1.07
UBP1-213ENST00000496310 DNAJB1P25685 340 aa8.34□□□□□ -1.07
UBP1-213ENST00000496310 NOVP48745 357 aa8.34□□□□□ -1.07
UBP1-213ENST00000496310 PTPN5P54829 565 aa8.34□□□□□ -1.07
UBP1-213ENST00000496310 ZXDAP98168 799 aa8.34□□□□□ -1.07
UBP1-213ENST00000496310 PWP2Q15269 919 aaKnown RBP8.34□□□□□ -1.07
UBP1-213ENST00000496310 STXBP2Q15833 593 aa8.34□□□□□ -1.07
UBP1-213ENST00000496310 CDC37Q16543 378 aaPredicted RBP8.34□□□□□ -1.07
UBP1-213ENST00000496310 CTC1Q2NKJ3 1217 aa8.34□□□□□ -1.07
UBP1-213ENST00000496310 HSDL1Q3SXM5 330 aa8.34□□□□□ -1.07
UBP1-213ENST00000496310 ARHGEF16Q5VV41 709 aa8.34□□□□□ -1.07
UBP1-213ENST00000496310 RBM23Q86U06 439 aaKnown RBP8.34□□□□□ -1.07
UBP1-213ENST00000496310 FIBCD1Q8N539 461 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms