RNA–Protein interactions for RNA: ENST00000496205.1

CLK1-214, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 480 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-214ENST00000496205 COPS5Q92905 334 aa5.75□□□□□ -1.49
CLK1-214ENST00000496205 ARMC5Q96C12 935 aa5.75□□□□□ -1.49
CLK1-214ENST00000496205 RCC1LQ96I51 464 aaKnown RBP5.75□□□□□ -1.49
CLK1-214ENST00000496205 AP5M1Q9H0R1 490 aa5.75□□□□□ -1.49
CLK1-214ENST00000496205 HS3ST3A1Q9Y663 406 aa5.75□□□□□ -1.49
CLK1-214ENST00000496205 TRBV23OR9-2A0A075B6M9 112 aa5.74□□□□□ -1.49
CLK1-214ENST00000496205 C22orf46C9J442 243 aa5.74□□□□□ -1.49
CLK1-214ENST00000496205 THBDP07204 575 aa5.74□□□□□ -1.49
CLK1-214ENST00000496205 IL13P35225 146 aa5.74□□□□□ -1.49
CLK1-214ENST00000496205 MLLT6P55198 1093 aaPredicted RBP5.74□□□□□ -1.49
CLK1-214ENST00000496205 GIMAP6Q6P9H5 292 aa5.74□□□□□ -1.49
CLK1-214ENST00000496205 MILR1Q7Z6M3 343 aa5.74□□□□□ -1.49
CLK1-214ENST00000496205 FAM126BQ8IXS8 530 aa5.74□□□□□ -1.49
CLK1-214ENST00000496205 SEC14L1Q92503 715 aa5.74□□□□□ -1.49
CLK1-214ENST00000496205 CDK5RAP1Q96SZ6 601 aaKnown RBP5.74□□□□□ -1.49
CLK1-214ENST00000496205 MMP19Q99542 508 aa5.74□□□□□ -1.49
CLK1-214ENST00000496205 BTG4Q9NY30 223 aa5.74□□□□□ -1.49
CLK1-214ENST00000496205 STK10O94804 968 aaKnown RBP5.73□□□□□ -1.49
CLK1-214ENST00000496205 CYP1A1P04798 512 aaPredicted RBP5.73□□□□□ -1.49
CLK1-214ENST00000496205 EPHB4P54760 987 aa5.73□□□□□ -1.49
CLK1-214ENST00000496205 SLC7A5Q01650 507 aa5.73□□□□□ -1.49
CLK1-214ENST00000496205 CCDC144BQ3MJ40 725 aa5.73□□□□□ -1.49
CLK1-214ENST00000496205 PRAMEF18Q5VWM3 479 aa5.73□□□□□ -1.49
CLK1-214ENST00000496205 USP51Q70EK9 711 aa5.73□□□□□ -1.49
CLK1-214ENST00000496205 CIR1Q86X95 450 aaPredicted RBP5.73□□□□□ -1.49
CLK1-214ENST00000496205 ZSWIM3Q96MP5 696 aa5.73□□□□□ -1.49
CLK1-214ENST00000496205 YTHDC1Q96MU7 727 aaKnown RBP5.73□□□□□ -1.49
CLK1-214ENST00000496205 DEF6Q9H4E7 631 aa5.73□□□□□ -1.49
CLK1-214ENST00000496205 PHAXQ9H814 394 aaKnown RBP5.73□□□□□ -1.49
CLK1-214ENST00000496205 APEX2Q9UBZ4 518 aa5.73□□□□□ -1.49
CLK1-214ENST00000496205 A0A1W2PQH9 124 aa5.72□□□□□ -1.49
CLK1-214ENST00000496205 KLF4O43474 513 aa5.72□□□□□ -1.49
CLK1-214ENST00000496205 SSBP05455 408 aaKnown RBP eCLIP5.72□□□□□ -1.49
CLK1-214ENST00000496205 FPR2P25090 351 aa5.72□□□□□ -1.49
CLK1-214ENST00000496205 PPP2CBP62714 309 aa5.72□□□□□ -1.49
CLK1-214ENST00000496205 PPP2CAP67775 309 aa5.72□□□□□ -1.49
CLK1-214ENST00000496205 SCRN1Q12765 414 aa5.72□□□□□ -1.49
CLK1-214ENST00000496205 SERINC3Q13530 473 aa5.72□□□□□ -1.49
CLK1-214ENST00000496205 PKN3Q6P5Z2 889 aa5.72□□□□□ -1.49
CLK1-214ENST00000496205 PLEKHH3Q7Z736 793 aa5.72□□□□□ -1.49
CLK1-214ENST00000496205 HNRNPLLQ8WVV9 542 aaKnown RBP5.72□□□□□ -1.49
CLK1-214ENST00000496205 ANAPC16Q96DE5 110 aa5.72□□□□□ -1.49
CLK1-214ENST00000496205 SPATA32Q96LK8 384 aa5.72□□□□□ -1.49
CLK1-214ENST00000496205 SUGT1Q9Y2Z0 365 aa5.72□□□□□ -1.49
CLK1-214ENST00000496205 PATE3B3GLJ2 98 aa5.71□□□□□ -1.5
CLK1-214ENST00000496205 SMAD7O15105 426 aaKnown RBP5.71□□□□□ -1.5
CLK1-214ENST00000496205 SLC6A11P48066 632 aa5.71□□□□□ -1.5
CLK1-214ENST00000496205 CYP4F3Q08477 520 aa5.71□□□□□ -1.5
CLK1-214ENST00000496205 COL9A2Q14055 689 aaPredicted RBP5.71□□□□□ -1.5
CLK1-214ENST00000496205 SPDYAQ5MJ70 313 aa5.71□□□□□ -1.5
CLK1-214ENST00000496205 ANKS3Q6ZW76 656 aa5.71□□□□□ -1.5
CLK1-214ENST00000496205 TMEM168Q9H0V1 697 aa5.71□□□□□ -1.5
CLK1-214ENST00000496205 AKT3Q9Y243 479 aa5.71□□□□□ -1.5
CLK1-214ENST00000496205 SLC12A7Q9Y666 1083 aa5.71□□□□□ -1.5
CLK1-214ENST00000496205 ARNTLO00327 626 aa5.7□□□□□ -1.5
CLK1-214ENST00000496205 B4GALT4O60513 344 aa5.7□□□□□ -1.5
CLK1-214ENST00000496205 KCNH1O95259 989 aa5.7□□□□□ -1.5
CLK1-214ENST00000496205 GIPRP48546 466 aa5.7□□□□□ -1.5
CLK1-214ENST00000496205 NKX3-2P78367 333 aa5.7□□□□□ -1.5
CLK1-214ENST00000496205 ARHGEF18Q6ZSZ5 1173 aa5.7□□□□□ -1.5
CLK1-214ENST00000496205 KBTBD2Q8IY47 623 aa5.7□□□□□ -1.5
CLK1-214ENST00000496205 CELF2-AS1Q8N7Q2 184 aa5.7□□□□□ -1.5
CLK1-214ENST00000496205 ZCCHC14Q8WYQ9 949 aaKnown RBP5.7□□□□□ -1.5
CLK1-214ENST00000496205 L2HGDHQ9H9P8 463 aa5.7□□□□□ -1.5
CLK1-214ENST00000496205 STRIP2Q9ULQ0 834 aa5.7□□□□□ -1.5
CLK1-214ENST00000496205 WASF3Q9UPY6 502 aa5.7□□□□□ -1.5
CLK1-214ENST00000496205 EMC9Q9Y3B6 208 aa5.7□□□□□ -1.5
CLK1-214ENST00000496205 SHROOM4Q9ULL8 1493 aa5.7□□□□□ -1.5
CLK1-214ENST00000496205 SELENOPP49908 381 aa5.69□□□□□ -1.5
CLK1-214ENST00000496205 NLRP10Q86W26 655 aa5.69□□□□□ -1.5
CLK1-214ENST00000496205 Q8TCH9 128 aa5.69□□□□□ -1.5
CLK1-214ENST00000496205 FRS2Q8WU20 508 aa5.69□□□□□ -1.5
CLK1-214ENST00000496205 CRBNQ96SW2 442 aa5.69□□□□□ -1.5
CLK1-214ENST00000496205 HIRIP3Q9BW71 556 aaPredicted RBP5.69□□□□□ -1.5
CLK1-214ENST00000496205 OSBPL2Q9H1P3 480 aa5.69□□□□□ -1.5
CLK1-214ENST00000496205 JADE2Q9NQC1 790 aa5.69□□□□□ -1.5
CLK1-214ENST00000496205 PRKAG3Q9UGI9 489 aa5.69□□□□□ -1.5
CLK1-214ENST00000496205 MUSKO15146 869 aa5.68□□□□□ -1.5
CLK1-214ENST00000496205 ZNF623O75123 536 aa5.68□□□□□ -1.5
CLK1-214ENST00000496205 EIF6P56537 245 aaKnown RBP5.68□□□□□ -1.5
CLK1-214ENST00000496205 BMS1Q14692 1282 aaKnown RBP5.68□□□□□ -1.5
CLK1-214ENST00000496205 SLFN13Q68D06 897 aa5.68□□□□□ -1.5
CLK1-214ENST00000496205 KIAA1211LQ6NV74 962 aa5.68□□□□□ -1.5
CLK1-214ENST00000496205 CEP68Q76N32 757 aa5.68□□□□□ -1.5
CLK1-214ENST00000496205 RIOX2Q8IUF8 465 aa5.68□□□□□ -1.5
CLK1-214ENST00000496205 FAM177A1Q8N128 213 aaPredicted RBP5.68□□□□□ -1.5
CLK1-214ENST00000496205 C19orf47Q8N9M1 422 aaKnown RBP5.68□□□□□ -1.5
CLK1-214ENST00000496205 ARRDC4Q8NCT1 418 aa5.68□□□□□ -1.5
CLK1-214ENST00000496205 NPLOC4Q8TAT6 608 aa5.68□□□□□ -1.5
CLK1-214ENST00000496205 MICAL1Q8TDZ2 1067 aa5.68□□□□□ -1.5
CLK1-214ENST00000496205 CPLX3Q8WVH0 158 aa5.68□□□□□ -1.5
CLK1-214ENST00000496205 LGR4Q9BXB1 951 aa5.68□□□□□ -1.5
CLK1-214ENST00000496205 MEGF9Q9H1U4 602 aa5.68□□□□□ -1.5
CLK1-214ENST00000496205 ZSWIM4Q9H7M6 989 aa5.68□□□□□ -1.5
CLK1-214ENST00000496205 NGRNQ9NPE2 291 aaKnown RBP5.68□□□□□ -1.5
CLK1-214ENST00000496205 TCAF1Q9Y4C2 921 aa5.68□□□□□ -1.5
CLK1-214ENST00000496205 TESMINQ9Y4I5 508 aa5.68□□□□□ -1.5
CLK1-214ENST00000496205 X6R8D5 127 aa5.68□□□□□ -1.5
CLK1-214ENST00000496205 RAB33AQ14088 237 aa5.67□□□□□ -1.5
CLK1-214ENST00000496205 MROH9Q5TGP6 573 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms