RNA–Protein interactions for RNA: ENST00000495172.1

GARNL3-219, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-219ENST00000495172 C1QTNF9BB2RNN3 333 aa10.73□□□□□ -0.69
GARNL3-219ENST00000495172 ARIH2O95376 493 aa10.73□□□□□ -0.69
GARNL3-219ENST00000495172 RB1P06400 928 aa10.73□□□□□ -0.69
GARNL3-219ENST00000495172 UQCRFS1P1P0C7P4 283 aa10.73□□□□□ -0.69
GARNL3-219ENST00000495172 C1QTNF9P0C862 333 aa10.73□□□□□ -0.69
GARNL3-219ENST00000495172 UBTFL1P0CB47 393 aaPredicted RBP10.73□□□□□ -0.69
GARNL3-219ENST00000495172 POTEGQ6S5H5 508 aa10.73□□□□□ -0.69
GARNL3-219ENST00000495172 SIX5Q8N196 739 aa10.73□□□□□ -0.69
GARNL3-219ENST00000495172 STK11IPQ8N1F8 1099 aa10.73□□□□□ -0.69
GARNL3-219ENST00000495172 PRPF38AQ8NAV1 312 aaKnown RBP10.73□□□□□ -0.69
GARNL3-219ENST00000495172 ATP8B4Q8TF62 1192 aa10.73□□□□□ -0.69
GARNL3-219ENST00000495172 POF1BQ8WVV4 589 aa10.73□□□□□ -0.69
GARNL3-219ENST00000495172 TLE6Q9H808 572 aa10.73□□□□□ -0.69
GARNL3-219ENST00000495172 ACAD9Q9H845 621 aa10.73□□□□□ -0.69
GARNL3-219ENST00000495172 FBXO40Q9UH90 709 aa10.73□□□□□ -0.69
GARNL3-219ENST00000495172 ANGPTL2Q9UKU9 493 aa10.73□□□□□ -0.69
GARNL3-219ENST00000495172 USP18Q9UMW8 372 aa10.73□□□□□ -0.69
GARNL3-219ENST00000495172 F5H6K3 240 aa10.72□□□□□ -0.69
GARNL3-219ENST00000495172 STK25O00506 426 aa10.72□□□□□ -0.69
GARNL3-219ENST00000495172 DCNP07585 359 aaKnown RBP10.72□□□□□ -0.69
GARNL3-219ENST00000495172 CTSHP09668 335 aa10.72□□□□□ -0.69
GARNL3-219ENST00000495172 ALAS1P13196 640 aa10.72□□□□□ -0.69
GARNL3-219ENST00000495172 TGM1P22735 817 aa10.72□□□□□ -0.69
GARNL3-219ENST00000495172 THPOP40225 353 aa10.72□□□□□ -0.69
GARNL3-219ENST00000495172 TECP42680 631 aa10.72□□□□□ -0.69
GARNL3-219ENST00000495172 CDK8P49336 464 aa10.72□□□□□ -0.69
GARNL3-219ENST00000495172 KLRC3Q07444 240 aa10.72□□□□□ -0.69
GARNL3-219ENST00000495172 SLFNL1Q499Z3 407 aa10.72□□□□□ -0.69
GARNL3-219ENST00000495172 VARS2Q5ST30 1063 aaKnown RBP10.72□□□□□ -0.69
GARNL3-219ENST00000495172 KANK3Q6NY19 840 aa10.72□□□□□ -0.69
GARNL3-219ENST00000495172 NSMFQ6X4W1 530 aa10.72□□□□□ -0.69
GARNL3-219ENST00000495172 MRPL50Q8N5N7 158 aaKnown RBP10.72□□□□□ -0.69
GARNL3-219ENST00000495172 KLHL23Q8NBE8 558 aa10.72□□□□□ -0.69
GARNL3-219ENST00000495172 AFG1LQ8WV93 481 aa10.72□□□□□ -0.69
GARNL3-219ENST00000495172 RTKNQ9BST9 563 aa10.72□□□□□ -0.69
GARNL3-219ENST00000495172 CYP39A1Q9NYL5 469 aa10.72□□□□□ -0.69
GARNL3-219ENST00000495172 GTF2IRD1Q9UHL9 959 aa10.72□□□□□ -0.69
GARNL3-219ENST00000495172 MRPL42Q9Y6G3 142 aaKnown RBP10.72□□□□□ -0.69
GARNL3-219ENST00000495172 ADGRA3Q8IWK6 1321 aa10.72□□□□□ -0.69
GARNL3-219ENST00000495172 PRKAB2O43741 272 aa10.71□□□□□ -0.69
GARNL3-219ENST00000495172 RING1Q06587 406 aa10.71□□□□□ -0.69
GARNL3-219ENST00000495172 PDE4BQ07343 736 aa10.71□□□□□ -0.69
GARNL3-219ENST00000495172 CHST3Q7LGC8 479 aa10.71□□□□□ -0.69
GARNL3-219ENST00000495172 CLP1Q92989 425 aaKnown RBP10.71□□□□□ -0.69
GARNL3-219ENST00000495172 TRERF1Q96PN7 1200 aa10.71□□□□□ -0.69
GARNL3-219ENST00000495172 RC3H2Q9HBD1 1191 aaKnown RBP10.71□□□□□ -0.69
GARNL3-219ENST00000495172 DCP1AQ9NPI6 582 aaPredicted RBP10.71□□□□□ -0.69
GARNL3-219ENST00000495172 TLR7Q9NYK1 1049 aaKnown RBP10.71□□□□□ -0.69
GARNL3-219ENST00000495172 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.71□□□□□ -0.69
GARNL3-219ENST00000495172 MYH7BA7E2Y1 1941 aa10.7□□□□□ -0.7
GARNL3-219ENST00000495172 COL4A3Q01955 1670 aa10.7□□□□□ -0.7
GARNL3-219ENST00000495172 TENM4Q6N022 2769 aa10.7□□□□□ -0.7
GARNL3-219ENST00000495172 RBM47A0AV96 593 aaKnown RBP10.7□□□□□ -0.7
GARNL3-219ENST00000495172 RSPH10B2B2RC85 870 aa10.7□□□□□ -0.7
GARNL3-219ENST00000495172 NARSO43776 548 aaKnown RBP10.7□□□□□ -0.7
GARNL3-219ENST00000495172 PARNO95453 639 aaKnown RBP10.7□□□□□ -0.7
GARNL3-219ENST00000495172 PROS1P07225 676 aa10.7□□□□□ -0.7
GARNL3-219ENST00000495172 RSPH10BP0C881 870 aa10.7□□□□□ -0.7
GARNL3-219ENST00000495172 ZNF286BP0CG31 522 aa10.7□□□□□ -0.7
GARNL3-219ENST00000495172 PTK7Q13308 1070 aa10.7□□□□□ -0.7
GARNL3-219ENST00000495172 BTG3Q14201 252 aaPredicted RBP10.7□□□□□ -0.7
GARNL3-219ENST00000495172 PPP2R5BQ15173 497 aa10.7□□□□□ -0.7
GARNL3-219ENST00000495172 PAN2Q504Q3 1202 aaKnown RBP10.7□□□□□ -0.7
GARNL3-219ENST00000495172 LRSAM1Q6UWE0 723 aa10.7□□□□□ -0.7
GARNL3-219ENST00000495172 LCORLQ8N3X6 602 aa10.7□□□□□ -0.7
GARNL3-219ENST00000495172 MORC4Q8TE76 937 aa10.7□□□□□ -0.7
GARNL3-219ENST00000495172 NEK1Q96PY6 1258 aa10.7□□□□□ -0.7
GARNL3-219ENST00000495172 MYH4Q9Y623 1939 aa10.7□□□□□ -0.7
GARNL3-219ENST00000495172 MAGEB6P1A0A0J9YX57 407 aa10.69□□□□□ -0.7
GARNL3-219ENST00000495172 KRBA1A5PL33 1030 aa10.69□□□□□ -0.7
GARNL3-219ENST00000495172 LRRN2O75325 713 aa10.69□□□□□ -0.7
GARNL3-219ENST00000495172 MMP3P08254 477 aa10.69□□□□□ -0.7
GARNL3-219ENST00000495172 GATMP50440 423 aa10.69□□□□□ -0.7
GARNL3-219ENST00000495172 ALDH5A1P51649 535 aaPredicted RBP10.69□□□□□ -0.7
GARNL3-219ENST00000495172 ERVFC1P60507 584 aa10.69□□□□□ -0.7
GARNL3-219ENST00000495172 APOBRQ0VD83 1088 aa10.69□□□□□ -0.7
GARNL3-219ENST00000495172 N4BP2L1Q5TBK1 243 aaPredicted RBP10.69□□□□□ -0.7
GARNL3-219ENST00000495172 ANKRD54Q6NXT1 300 aa10.69□□□□□ -0.7
GARNL3-219ENST00000495172 RASGRP2Q7LDG7 609 aa10.69□□□□□ -0.7
GARNL3-219ENST00000495172 SESTD1Q86VW0 696 aa10.69□□□□□ -0.7
GARNL3-219ENST00000495172 MAML2Q8IZL2 1156 aaPredicted RBP10.69□□□□□ -0.7
GARNL3-219ENST00000495172 C7orf31Q8N865 590 aa10.69□□□□□ -0.7
GARNL3-219ENST00000495172 MICAL1Q8TDZ2 1067 aa10.69□□□□□ -0.7
GARNL3-219ENST00000495172 SEPT8Q92599 483 aa10.69□□□□□ -0.7
GARNL3-219ENST00000495172 PPP2R3CQ969Q6 453 aa10.69□□□□□ -0.7
GARNL3-219ENST00000495172 RTP3Q9BQQ7 232 aa10.69□□□□□ -0.7
GARNL3-219ENST00000495172 KANSL2Q9H9L4 492 aa10.69□□□□□ -0.7
GARNL3-219ENST00000495172 GPR108Q9NPR9 543 aa10.69□□□□□ -0.7
GARNL3-219ENST00000495172 FBXL21Q9UKT6 434 aa10.69□□□□□ -0.7
GARNL3-219ENST00000495172 ISY1Q9ULR0 285 aaKnown RBP10.69□□□□□ -0.7
GARNL3-219ENST00000495172 LHX6Q9UPM6 363 aa10.69□□□□□ -0.7
GARNL3-219ENST00000495172 GREB1LQ9C091 1923 aaPredicted RBP10.68□□□□□ -0.7
GARNL3-219ENST00000495172 SRGAP3O43295 1099 aa10.68□□□□□ -0.7
GARNL3-219ENST00000495172 SORBS3O60504 671 aa10.68□□□□□ -0.7
GARNL3-219ENST00000495172 TXNP10599 105 aaKnown RBP10.68□□□□□ -0.7
GARNL3-219ENST00000495172 SDHBP21912 280 aa10.68□□□□□ -0.7
GARNL3-219ENST00000495172 PMLP29590 882 aa10.68□□□□□ -0.7
GARNL3-219ENST00000495172 PSEN2P49810 448 aa10.68□□□□□ -0.7
GARNL3-219ENST00000495172 LMNB2Q03252 620 aa10.68□□□□□ -0.7
GARNL3-219ENST00000495172 BAATQ14032 418 aaPredicted RBP10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms