RNA–Protein interactions for RNA: ENST00000495016.5

CDK11A-221, Transcript of cyclin dependent kinase 11A, humanhuman

TSL 2

Gene CDK11A, Length 286 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-221ENST00000495016 CTAGE1Q96RT6 745 aa13.45□□□□□ -0.26
CDK11A-221ENST00000495016 MYL10Q9BUA6 226 aa13.45□□□□□ -0.26
CDK11A-221ENST00000495016 COL25A1Q9BXS0 654 aaPredicted RBP13.45□□□□□ -0.26
CDK11A-221ENST00000495016 SEC63Q9UGP8 760 aaKnown RBP13.45□□□□□ -0.26
CDK11A-221ENST00000495016 SH2B2O14492 632 aaPredicted RBP13.44□□□□□ -0.26
CDK11A-221ENST00000495016 SORBS3O60504 671 aa13.44□□□□□ -0.26
CDK11A-221ENST00000495016 ZNF286BP0CG31 522 aa13.44□□□□□ -0.26
CDK11A-221ENST00000495016 UBA1P22314 1058 aaKnown RBP13.44□□□□□ -0.26
CDK11A-221ENST00000495016 PTK7Q13308 1070 aa13.44□□□□□ -0.26
CDK11A-221ENST00000495016 NECTIN1Q15223 517 aa13.44□□□□□ -0.26
CDK11A-221ENST00000495016 GNPTABQ3T906 1256 aa13.44□□□□□ -0.26
CDK11A-221ENST00000495016 CREB3L3Q68CJ9 461 aa13.44□□□□□ -0.26
CDK11A-221ENST00000495016 XRRA1Q6P2D8 792 aa13.44□□□□□ -0.26
CDK11A-221ENST00000495016 SMARCC2Q8TAQ2 1214 aa13.44□□□□□ -0.26
CDK11A-221ENST00000495016 ANO2Q9NQ90 1003 aa13.44□□□□□ -0.26
CDK11A-221ENST00000495016 CUL9Q8IWT3 2517 aa13.43□□□□□ -0.26
CDK11A-221ENST00000495016 UNC80Q8N2C7 3258 aa13.43□□□□□ -0.26
CDK11A-221ENST00000495016 SPATA31C2B4DYI2 1134 aa13.43□□□□□ -0.26
CDK11A-221ENST00000495016 KIF28PB7ZC32 967 aa13.43□□□□□ -0.26
CDK11A-221ENST00000495016 BAIAP3O94812 1187 aa13.43□□□□□ -0.26
CDK11A-221ENST00000495016 CKBP12277 381 aa13.43□□□□□ -0.26
CDK11A-221ENST00000495016 MYOGP15173 224 aa13.43□□□□□ -0.26
CDK11A-221ENST00000495016 IGFBP4P22692 258 aa13.43□□□□□ -0.26
CDK11A-221ENST00000495016 ICAM3P32942 547 aa13.43□□□□□ -0.26
CDK11A-221ENST00000495016 MRPS9P82933 396 aaKnown RBP13.43□□□□□ -0.26
CDK11A-221ENST00000495016 RBL2Q08999 1139 aa13.43□□□□□ -0.26
CDK11A-221ENST00000495016 NEDD9Q14511 834 aa13.43□□□□□ -0.26
CDK11A-221ENST00000495016 BMP2KLQ5H9B9 411 aa13.43□□□□□ -0.26
CDK11A-221ENST00000495016 RNF20Q5VTR2 975 aa13.43□□□□□ -0.26
CDK11A-221ENST00000495016 PPP2R2DQ66LE6 453 aa13.43□□□□□ -0.26
CDK11A-221ENST00000495016 LRRC8DQ7L1W4 858 aa13.43□□□□□ -0.26
CDK11A-221ENST00000495016 CENPQQ7L2Z9 268 aaPredicted RBP13.43□□□□□ -0.26
CDK11A-221ENST00000495016 SRBD1Q8N5C6 995 aaKnown RBP13.43□□□□□ -0.26
CDK11A-221ENST00000495016 DHX38Q92620 1227 aaKnown RBP13.43□□□□□ -0.26
CDK11A-221ENST00000495016 GPKOWQ92917 476 aaPredicted RBP eCLIP13.43□□□□□ -0.26
CDK11A-221ENST00000495016 INPP4AQ96PE3 977 aaPredicted RBP13.43□□□□□ -0.26
CDK11A-221ENST00000495016 SLC9A7Q96T83 725 aa13.43□□□□□ -0.26
CDK11A-221ENST00000495016 C16orf70Q9BSU1 422 aa13.43□□□□□ -0.26
CDK11A-221ENST00000495016 RTEL1Q9NZ71 1219 aa13.43□□□□□ -0.26
CDK11A-221ENST00000495016 SLC12A7Q9Y666 1083 aa13.43□□□□□ -0.26
CDK11A-221ENST00000495016 PRUNE2Q8WUY3 3088 aa13.43□□□□□ -0.26
CDK11A-221ENST00000495016 H3BRB1 525 aa13.42□□□□□ -0.26
CDK11A-221ENST00000495016 PIK3CDO00329 1044 aa13.42□□□□□ -0.26
CDK11A-221ENST00000495016 NOP56O00567 594 aaKnown RBP13.42□□□□□ -0.26
CDK11A-221ENST00000495016 MEIS2O14770 477 aa13.42□□□□□ -0.26
CDK11A-221ENST00000495016 ADGRE1Q14246 886 aa13.42□□□□□ -0.26
CDK11A-221ENST00000495016 GPNMBQ14956 572 aa13.42□□□□□ -0.26
CDK11A-221ENST00000495016 USP17L6PQ6QN14 398 aa13.42□□□□□ -0.26
CDK11A-221ENST00000495016 SYNE3Q6ZMZ3 975 aa13.42□□□□□ -0.26
CDK11A-221ENST00000495016 USP38Q8NB14 1042 aa13.42□□□□□ -0.26
CDK11A-221ENST00000495016 FANCBQ8NB91 859 aa13.42□□□□□ -0.26
CDK11A-221ENST00000495016 PPM1EQ8WY54 764 aa13.42□□□□□ -0.26
CDK11A-221ENST00000495016 USP26Q9BXU7 913 aa13.42□□□□□ -0.26
CDK11A-221ENST00000495016 TUT1Q9H6E5 874 aaKnown RBP13.42□□□□□ -0.26
CDK11A-221ENST00000495016 PSTPIP2Q9H939 334 aa13.42□□□□□ -0.26
CDK11A-221ENST00000495016 FRMPD4Q14CM0 1322 aa13.41□□□□□ -0.26
CDK11A-221ENST00000495016 CDH23Q9H251 3354 aa13.41□□□□□ -0.26
CDK11A-221ENST00000495016 FIBPO43427 364 aa13.41□□□□□ -0.26
CDK11A-221ENST00000495016 PLEKHA8P1O95397 391 aa13.41□□□□□ -0.26
CDK11A-221ENST00000495016 CXCL10P02778 98 aa13.41□□□□□ -0.26
CDK11A-221ENST00000495016 CA3P07451 260 aa13.41□□□□□ -0.26
CDK11A-221ENST00000495016 KCNJ6P48051 423 aa13.41□□□□□ -0.26
CDK11A-221ENST00000495016 ZNF200P98182 395 aaPredicted RBP13.41□□□□□ -0.26
CDK11A-221ENST00000495016 PCNX4Q63HM2 1172 aa13.41□□□□□ -0.26
CDK11A-221ENST00000495016 METTL7BQ6UX53 244 aa13.41□□□□□ -0.26
CDK11A-221ENST00000495016 CYFIP1Q7L576 1253 aa13.41□□□□□ -0.26
CDK11A-221ENST00000495016 NLRX1Q86UT6 975 aa13.41□□□□□ -0.26
CDK11A-221ENST00000495016 HERC6Q8IVU3 1022 aa13.41□□□□□ -0.26
CDK11A-221ENST00000495016 CMTR1Q8N1G2 835 aaKnown RBP13.41□□□□□ -0.26
CDK11A-221ENST00000495016 SYMPKQ92797 1274 aaKnown RBP13.41□□□□□ -0.26
CDK11A-221ENST00000495016 SENP7Q9BQF6 1050 aa13.41□□□□□ -0.26
CDK11A-221ENST00000495016 BCAS3Q9H6U6 928 aa13.41□□□□□ -0.26
CDK11A-221ENST00000495016 EYSQ5T1H1 3165 aa13.4□□□□□ -0.26
CDK11A-221ENST00000495016 ABHD14A-ACY1A0A1B0GW23 586 aa13.4□□□□□ -0.26
CDK11A-221ENST00000495016 NBNO60934 754 aa13.4□□□□□ -0.26
CDK11A-221ENST00000495016 LGALS2P05162 132 aa13.4□□□□□ -0.26
CDK11A-221ENST00000495016 RXRAP19793 462 aa13.4□□□□□ -0.26
CDK11A-221ENST00000495016 COL9A3Q14050 684 aaPredicted RBP13.4□□□□□ -0.26
CDK11A-221ENST00000495016 CCDC85BQ15834 202 aaPredicted RBP13.4□□□□□ -0.26
CDK11A-221ENST00000495016 TRIM71Q2Q1W2 868 aaKnown RBP13.4□□□□□ -0.26
CDK11A-221ENST00000495016 ZNF618Q5T7W0 954 aa13.4□□□□□ -0.26
CDK11A-221ENST00000495016 CNKSR3Q6P9H4 555 aa13.4□□□□□ -0.26
CDK11A-221ENST00000495016 SERINC5Q86VE9 423 aa13.4□□□□□ -0.26
CDK11A-221ENST00000495016 SGMS1Q86VZ5 419 aa13.4□□□□□ -0.26
CDK11A-221ENST00000495016 CCDC82Q8N4S0 544 aa13.4□□□□□ -0.26
CDK11A-221ENST00000495016 GIMAP8Q8ND71 665 aaPredicted RBP13.4□□□□□ -0.26
CDK11A-221ENST00000495016 LRRC2Q9BYS8 371 aa13.4□□□□□ -0.26
CDK11A-221ENST00000495016 LRRC37A2A6NM11 1700 aa13.39□□□□□ -0.27
CDK11A-221ENST00000495016 LCTP09848 1927 aa13.39□□□□□ -0.27
CDK11A-221ENST00000495016 C17orf102A2RUQ5 167 aa13.39□□□□□ -0.27
CDK11A-221ENST00000495016 TLL1O43897 1013 aa13.39□□□□□ -0.27
CDK11A-221ENST00000495016 EFCAB14O75071 495 aa13.39□□□□□ -0.27
CDK11A-221ENST00000495016 SMIM10L2AP0DMW4 78 aa13.39□□□□□ -0.27
CDK11A-221ENST00000495016 SMIM10L2BP0DMW5 78 aa13.39□□□□□ -0.27
CDK11A-221ENST00000495016 GNAT1P11488 350 aa13.39□□□□□ -0.27
CDK11A-221ENST00000495016 THPOP40225 353 aa13.39□□□□□ -0.27
CDK11A-221ENST00000495016 SEMA3FQ13275 785 aa13.39□□□□□ -0.27
CDK11A-221ENST00000495016 IKBKEQ14164 716 aa13.39□□□□□ -0.27
CDK11A-221ENST00000495016 HIC1Q14526 733 aa13.39□□□□□ -0.27
CDK11A-221ENST00000495016 TMTC3Q6ZXV5 915 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms