RNA–Protein interactions for RNA: ENST00000494942.5

UBXN11-215, Transcript of UBX domain protein 11, humanhuman

TSL 2

Gene UBXN11, Length 2,325 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-215ENST00000494942 BMP2KQ9NSY1 1161 aaPredicted RBP16.47■□□□□ 0.23
UBXN11-215ENST00000494942 COL4A3BPQ9Y5P4 624 aa16.47■□□□□ 0.23
UBXN11-215ENST00000494942 FOCADQ5VW36 1801 aa16.47■□□□□ 0.23
UBXN11-215ENST00000494942 ZMYND10O75800 440 aa16.46■□□□□ 0.23
UBXN11-215ENST00000494942 GCFC2P16383 781 aaKnown RBP16.46■□□□□ 0.23
UBXN11-215ENST00000494942 ASTE1Q2TB18 679 aaPredicted RBP16.46■□□□□ 0.23
UBXN11-215ENST00000494942 CCDC181Q5TID7 509 aa16.46■□□□□ 0.23
UBXN11-215ENST00000494942 NT5C3AQ9H0P0 336 aa16.46■□□□□ 0.23
UBXN11-215ENST00000494942 LUC7LQ9NQ29 371 aaKnown RBP16.46■□□□□ 0.23
UBXN11-215ENST00000494942 TNS1Q9HBL0 1735 aaKnown RBP16.46■□□□□ 0.23
UBXN11-215ENST00000494942 KDM3AQ9Y4C1 1321 aa16.46■□□□□ 0.23
UBXN11-215ENST00000494942 IGKV6D-41A0A0C4DH26 115 aa16.46■□□□□ 0.23
UBXN11-215ENST00000494942 RBAK-RBAKDNI3L0D1 243 aa16.46■□□□□ 0.23
UBXN11-215ENST00000494942 GNA14O95837 355 aa16.46■□□□□ 0.23
UBXN11-215ENST00000494942 PAFAH1B1P43034 410 aa16.46■□□□□ 0.23
UBXN11-215ENST00000494942 TNNI2P48788 182 aa16.46■□□□□ 0.23
UBXN11-215ENST00000494942 MRPL12P52815 198 aaKnown RBP16.46■□□□□ 0.23
UBXN11-215ENST00000494942 GABPAQ06546 454 aa16.46■□□□□ 0.23
UBXN11-215ENST00000494942 SLC20A2Q08357 652 aa16.46■□□□□ 0.23
UBXN11-215ENST00000494942 CRY2Q49AN0 593 aa16.46■□□□□ 0.23
UBXN11-215ENST00000494942 ZCWPW2Q504Y3 356 aa16.46■□□□□ 0.23
UBXN11-215ENST00000494942 CEP63Q96MT8 703 aa16.46■□□□□ 0.23
UBXN11-215ENST00000494942 NOX5Q96PH1 765 aa16.46■□□□□ 0.23
UBXN11-215ENST00000494942 NUDT12Q9BQG2 462 aa16.46■□□□□ 0.23
UBXN11-215ENST00000494942 TANGO6Q9C0B7 1094 aa16.46■□□□□ 0.23
UBXN11-215ENST00000494942 CEP72Q9P209 647 aa16.46■□□□□ 0.23
UBXN11-215ENST00000494942 RNF14Q9UBS8 474 aa16.46■□□□□ 0.23
UBXN11-215ENST00000494942 DDX25Q9UHL0 483 aaKnown RBP16.46■□□□□ 0.23
UBXN11-215ENST00000494942 TAF1LQ8IZX4 1826 aa16.46■□□□□ 0.22
UBXN11-215ENST00000494942 C10orf71Q711Q0 1435 aa16.45■□□□□ 0.22
UBXN11-215ENST00000494942 SLC26A4O43511 780 aa16.45■□□□□ 0.22
UBXN11-215ENST00000494942 MYBL2P10244 700 aa16.45■□□□□ 0.22
UBXN11-215ENST00000494942 GGCXP38435 758 aa16.45■□□□□ 0.22
UBXN11-215ENST00000494942 CLK2P49760 499 aaKnown RBP16.45■□□□□ 0.22
UBXN11-215ENST00000494942 COASYQ13057 564 aa16.45■□□□□ 0.22
UBXN11-215ENST00000494942 SLC9C1Q4G0N8 1177 aa16.45■□□□□ 0.22
UBXN11-215ENST00000494942 HYIQ5T013 277 aa16.45■□□□□ 0.22
UBXN11-215ENST00000494942 CUL5Q93034 780 aa16.45■□□□□ 0.22
UBXN11-215ENST00000494942 DNAJC19Q96DA6 116 aa16.45■□□□□ 0.22
UBXN11-215ENST00000494942 RBM17Q96I25 401 aaKnown RBP16.45■□□□□ 0.22
UBXN11-215ENST00000494942 PODXL2Q9NZ53 605 aa16.45■□□□□ 0.22
UBXN11-215ENST00000494942 GOLGA6BA6NDN3 693 aa16.45■□□□□ 0.22
UBXN11-215ENST00000494942 TTLL1O95922 423 aa16.45■□□□□ 0.22
UBXN11-215ENST00000494942 ZNF543Q08ER8 600 aa16.45■□□□□ 0.22
UBXN11-215ENST00000494942 PRR5LQ6MZQ0 368 aa16.45■□□□□ 0.22
UBXN11-215ENST00000494942 KCNK18Q7Z418 384 aa16.45■□□□□ 0.22
UBXN11-215ENST00000494942 SRLQ86TD4 932 aa16.45■□□□□ 0.22
UBXN11-215ENST00000494942 LRRC47Q8N1G4 583 aaKnown RBP16.45■□□□□ 0.22
UBXN11-215ENST00000494942 ZBTB9Q96C00 473 aa16.45■□□□□ 0.22
UBXN11-215ENST00000494942 JMJD4Q9H9V9 463 aa16.45■□□□□ 0.22
UBXN11-215ENST00000494942 PANK4Q9NVE7 773 aa16.45■□□□□ 0.22
UBXN11-215ENST00000494942 MYO3BQ8WXR4 1341 aa16.44■□□□□ 0.22
UBXN11-215ENST00000494942 TRAF5O00463 557 aa16.44■□□□□ 0.22
UBXN11-215ENST00000494942 MARCH6O60337 910 aa16.44■□□□□ 0.22
UBXN11-215ENST00000494942 BBOX1O75936 387 aa16.44■□□□□ 0.22
UBXN11-215ENST00000494942 CCDC40Q4G0X9 1142 aa16.44■□□□□ 0.22
UBXN11-215ENST00000494942 GLE1Q53GS7 698 aaKnown RBP16.44■□□□□ 0.22
UBXN11-215ENST00000494942 FAM26FQ5R3K3 315 aa16.44■□□□□ 0.22
UBXN11-215ENST00000494942 DRC1Q96MC2 740 aa16.44■□□□□ 0.22
UBXN11-215ENST00000494942 TRERF1Q96PN7 1200 aa16.44■□□□□ 0.22
UBXN11-215ENST00000494942 LRRC1Q9BTT6 524 aa16.44■□□□□ 0.22
UBXN11-215ENST00000494942 GPCPD1Q9NPB8 672 aa16.44■□□□□ 0.22
UBXN11-215ENST00000494942 SWAP70Q9UH65 585 aa16.44■□□□□ 0.22
UBXN11-215ENST00000494942 PCDHA12Q9UN75 941 aa16.44■□□□□ 0.22
UBXN11-215ENST00000494942 SERPING1P05155 500 aa16.44■□□□□ 0.22
UBXN11-215ENST00000494942 KCNMA1Q12791 1236 aa16.44■□□□□ 0.22
UBXN11-215ENST00000494942 LRRC41Q15345 812 aa16.44■□□□□ 0.22
UBXN11-215ENST00000494942 GPATCH4Q5T3I0 446 aaKnown RBP16.44■□□□□ 0.22
UBXN11-215ENST00000494942 SFMBT2Q5VUG0 894 aa16.44■□□□□ 0.22
UBXN11-215ENST00000494942 HGSNATQ68CP4 663 aa16.44■□□□□ 0.22
UBXN11-215ENST00000494942 NFRKBQ6P4R8 1299 aa16.44■□□□□ 0.22
UBXN11-215ENST00000494942 ADGRF4Q8IZF3 695 aa16.44■□□□□ 0.22
UBXN11-215ENST00000494942 HAS1Q92839 578 aa16.44■□□□□ 0.22
UBXN11-215ENST00000494942 GLT8D2Q9H1C3 349 aa16.44■□□□□ 0.22
UBXN11-215ENST00000494942 FEZ2Q9UHY8 353 aaPredicted RBP16.44■□□□□ 0.22
UBXN11-215ENST00000494942 DAGLAQ9Y4D2 1042 aa16.44■□□□□ 0.22
UBXN11-215ENST00000494942 AGPSO00116 658 aa16.43■□□□□ 0.22
UBXN11-215ENST00000494942 MYO1CO00159 1063 aa16.43■□□□□ 0.22
UBXN11-215ENST00000494942 AKR1B1P15121 316 aa16.43■□□□□ 0.22
UBXN11-215ENST00000494942 ADRA2BP18089 450 aa16.43■□□□□ 0.22
UBXN11-215ENST00000494942 TNFRSF8P28908 595 aa16.43■□□□□ 0.22
UBXN11-215ENST00000494942 EPHB4P54760 987 aa16.43■□□□□ 0.22
UBXN11-215ENST00000494942 MARSP56192 900 aaKnown RBP16.43■□□□□ 0.22
UBXN11-215ENST00000494942 GFPT1Q06210 699 aaPredicted RBP16.43■□□□□ 0.22
UBXN11-215ENST00000494942 TDRD12Q587J7 1177 aaKnown RBP16.43■□□□□ 0.22
UBXN11-215ENST00000494942 EMBQ6PCB8 327 aa16.43■□□□□ 0.22
UBXN11-215ENST00000494942 LRRC31Q6UY01 552 aa16.43■□□□□ 0.22
UBXN11-215ENST00000494942 DPP8Q6V1X1 898 aaPredicted RBP16.43■□□□□ 0.22
UBXN11-215ENST00000494942 CCDC65Q8IXS2 484 aa16.43■□□□□ 0.22
UBXN11-215ENST00000494942 GSPT2Q8IYD1 628 aaKnown RBP16.43■□□□□ 0.22
UBXN11-215ENST00000494942 GDAP1L1Q96MZ0 367 aa16.43■□□□□ 0.22
UBXN11-215ENST00000494942 STIM2Q9P246 746 aa16.43■□□□□ 0.22
UBXN11-215ENST00000494942 SUGT1Q9Y2Z0 365 aa16.43■□□□□ 0.22
UBXN11-215ENST00000494942 RRP15Q9Y3B9 282 aaKnown RBP16.43■□□□□ 0.22
UBXN11-215ENST00000494942 LY75O60449 1722 aa16.43■□□□□ 0.22
UBXN11-215ENST00000494942 RASSF7Q02833 373 aa16.42■□□□□ 0.22
UBXN11-215ENST00000494942 CFAP221Q4G0U5 840 aa16.42■□□□□ 0.22
UBXN11-215ENST00000494942 ECM1Q16610 540 aa16.42■□□□□ 0.22
UBXN11-215ENST00000494942 UBE2SQ16763 222 aa16.42■□□□□ 0.22
UBXN11-215ENST00000494942 FAM83BQ5T0W9 1011 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms