RNA–Protein interactions for RNA: ENST00000494854.5

SHISA5-216, Transcript of shisa family member 5, humanhuman

TSL 1 (best)

Gene SHISA5, Length 1,908 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA5-216ENST00000494854 GLT8D2Q9H1C3 349 aa17.51■□□□□ 0.39
SHISA5-216ENST00000494854 PNMA3Q9UL41 463 aa17.51■□□□□ 0.39
SHISA5-216ENST00000494854 NDUFB10O96000 172 aa17.5■□□□□ 0.39
SHISA5-216ENST00000494854 HMGCS2P54868 508 aa17.5■□□□□ 0.39
SHISA5-216ENST00000494854 PABPC4Q13310 644 aaKnown RBP eCLIP17.5■□□□□ 0.392e-6■■■■□ 19.8
SHISA5-216ENST00000494854 TREML2Q5T2D2 321 aa17.5■□□□□ 0.39
SHISA5-216ENST00000494854 PPP4R3AQ6IN85 833 aa17.5■□□□□ 0.39
SHISA5-216ENST00000494854 NRDCO43847 1150 aa17.49■□□□□ 0.39
SHISA5-216ENST00000494854 FXR2P51116 673 aaKnown RBP eCLIP17.49■□□□□ 0.39
SHISA5-216ENST00000494854 PRMT2P55345 433 aa17.49■□□□□ 0.39
SHISA5-216ENST00000494854 KCNB1Q14721 858 aa17.49■□□□□ 0.39
SHISA5-216ENST00000494854 TPD52L1Q16890 204 aaPredicted RBP17.49■□□□□ 0.39
SHISA5-216ENST00000494854 CDKAL1Q5VV42 579 aa17.49■□□□□ 0.39
SHISA5-216ENST00000494854 RWDD2AQ9UIY3 292 aa17.49■□□□□ 0.39
SHISA5-216ENST00000494854 PCDHA1Q9Y5I3 950 aa17.49■□□□□ 0.39
SHISA5-216ENST00000494854 PAK1Q13153 545 aa17.49■□□□□ 0.39
SHISA5-216ENST00000494854 MTMR2Q13614 643 aa17.49■□□□□ 0.39
SHISA5-216ENST00000494854 TMEM266Q2M3C6 531 aa17.49■□□□□ 0.39
SHISA5-216ENST00000494854 CALML4Q96GE6 196 aa17.49■□□□□ 0.39
SHISA5-216ENST00000494854 C16orf45Q96MC5 204 aaPredicted RBP17.49■□□□□ 0.39
SHISA5-216ENST00000494854 NUP88Q99567 741 aaPredicted RBP17.49■□□□□ 0.39
SHISA5-216ENST00000494854 MMTAG2Q9BU76 263 aaKnown RBP17.49■□□□□ 0.39
SHISA5-216ENST00000494854 UQCRHLA0A096LP55 91 aa17.48■□□□□ 0.39
SHISA5-216ENST00000494854 A0A1B0GTH6 734 aa17.48■□□□□ 0.39
SHISA5-216ENST00000494854 KLRC4O43908 158 aa17.48■□□□□ 0.39
SHISA5-216ENST00000494854 UQCRHP07919 91 aa17.48■□□□□ 0.39
SHISA5-216ENST00000494854 HOXA7P31268 230 aaPredicted RBP17.48■□□□□ 0.39
SHISA5-216ENST00000494854 SEMA3FQ13275 785 aa17.48■□□□□ 0.39
SHISA5-216ENST00000494854 NR1I3Q14994 352 aa17.48■□□□□ 0.39
SHISA5-216ENST00000494854 PTPN21Q16825 1174 aa17.48■□□□□ 0.39
SHISA5-216ENST00000494854 KMT5BQ4FZB7 885 aa17.48■□□□□ 0.39
SHISA5-216ENST00000494854 RAB34Q9BZG1 259 aa17.48■□□□□ 0.39
SHISA5-216ENST00000494854 ARHGAP39Q9C0H5 1083 aa17.48■□□□□ 0.39
SHISA5-216ENST00000494854 KCND1Q9NSA2 647 aa17.48■□□□□ 0.39
SHISA5-216ENST00000494854 TMOD4Q9NZQ9 345 aa17.48■□□□□ 0.39
SHISA5-216ENST00000494854 LRWD1Q9UFC0 647 aa17.48■□□□□ 0.39
SHISA5-216ENST00000494854 SYNPO2Q9UMS6 1093 aa17.48■□□□□ 0.39
SHISA5-216ENST00000494854 GDAQ9Y2T3 454 aa17.48■□□□□ 0.39
SHISA5-216ENST00000494854 BMP3P12645 472 aa17.47■□□□□ 0.39
SHISA5-216ENST00000494854 APTXQ7Z2E3 356 aaKnown RBP17.47■□□□□ 0.39
SHISA5-216ENST00000494854 SMCR8Q8TEV9 937 aaPredicted RBP17.47■□□□□ 0.39
SHISA5-216ENST00000494854 DDX25Q9UHL0 483 aaKnown RBP17.47■□□□□ 0.39
SHISA5-216ENST00000494854 A0A1W2PRG0 241 aa17.47■□□□□ 0.39
SHISA5-216ENST00000494854 USP27XA6NNY8 438 aa17.47■□□□□ 0.39
SHISA5-216ENST00000494854 RHOBTB3O94955 611 aa17.47■□□□□ 0.39
SHISA5-216ENST00000494854 GCFC2P16383 781 aaKnown RBP17.47■□□□□ 0.39
SHISA5-216ENST00000494854 OSBPP22059 807 aa17.47■□□□□ 0.39
SHISA5-216ENST00000494854 PRCPP42785 496 aa17.47■□□□□ 0.39
SHISA5-216ENST00000494854 PSMC4P43686 418 aa17.47■□□□□ 0.39
SHISA5-216ENST00000494854 KCNJ6P48051 423 aa17.47■□□□□ 0.39
SHISA5-216ENST00000494854 GCLCP48506 637 aaPredicted RBP17.47■□□□□ 0.39
SHISA5-216ENST00000494854 IKQ13123 557 aaPredicted RBP17.47■□□□□ 0.39
SHISA5-216ENST00000494854 TBX2Q13207 712 aaPredicted RBP17.47■□□□□ 0.39
SHISA5-216ENST00000494854 PDIA5Q14554 519 aa17.47■□□□□ 0.39
SHISA5-216ENST00000494854 SYDE2Q5VT97 1194 aa17.47■□□□□ 0.39
SHISA5-216ENST00000494854 SPECC1LQ69YQ0 1117 aa17.47■□□□□ 0.39
SHISA5-216ENST00000494854 CCDC112Q8NEF3 446 aa17.47■□□□□ 0.39
SHISA5-216ENST00000494854 NELFBQ8WX92 580 aa17.47■□□□□ 0.39
SHISA5-216ENST00000494854 ARMC5Q96C12 935 aa17.47■□□□□ 0.39
SHISA5-216ENST00000494854 CTAGE1Q96RT6 745 aa17.47■□□□□ 0.39
SHISA5-216ENST00000494854 NAP1L4Q99733 375 aaKnown RBP17.47■□□□□ 0.39
SHISA5-216ENST00000494854 AMNQ9BXJ7 453 aa17.47■□□□□ 0.39
SHISA5-216ENST00000494854 ZSWIM8A7E2V4 1837 aa17.46■□□□□ 0.39
SHISA5-216ENST00000494854 HTTP42858 3142 aa17.46■□□□□ 0.39
SHISA5-216ENST00000494854 MGAMO43451 1857 aa17.46■□□□□ 0.39
SHISA5-216ENST00000494854 USP17L15C9J2P7 530 aa17.46■□□□□ 0.39
SHISA5-216ENST00000494854 USP17L13C9JLJ4 530 aa17.46■□□□□ 0.39
SHISA5-216ENST00000494854 USP17L11C9JVI0 530 aa17.46■□□□□ 0.39
SHISA5-216ENST00000494854 USP17L18D6R9N7 530 aa17.46■□□□□ 0.39
SHISA5-216ENST00000494854 USP17L22D6RA61 530 aa17.46■□□□□ 0.39
SHISA5-216ENST00000494854 USP17L17D6RBQ6 530 aa17.46■□□□□ 0.39
SHISA5-216ENST00000494854 USP17L19D6RCP7 530 aa17.46■□□□□ 0.39
SHISA5-216ENST00000494854 USP17L20D6RJB6 530 aa17.46■□□□□ 0.39
SHISA5-216ENST00000494854 TNNT1P13805 278 aa17.46■□□□□ 0.39
SHISA5-216ENST00000494854 HOXD10P28358 340 aa17.46■□□□□ 0.39
SHISA5-216ENST00000494854 CTGFP29279 349 aa17.46■□□□□ 0.39
SHISA5-216ENST00000494854 USP17L24Q0WX57 530 aa17.46■□□□□ 0.39
SHISA5-216ENST00000494854 USP17L6PQ6QN14 398 aa17.46■□□□□ 0.39
SHISA5-216ENST00000494854 ADSSL1Q8N142 457 aa17.46■□□□□ 0.39
SHISA5-216ENST00000494854 CCAR2Q8N163 923 aaKnown RBP17.46■□□□□ 0.39
SHISA5-216ENST00000494854 TRIM47Q96LD4 638 aa17.46■□□□□ 0.39
SHISA5-216ENST00000494854 C12orf42Q96LP6 360 aa17.46■□□□□ 0.39
SHISA5-216ENST00000494854 C7orf25Q9BPX7 421 aa17.46■□□□□ 0.39
SHISA5-216ENST00000494854 ASCC2Q9H1I8 757 aaPredicted RBP17.46■□□□□ 0.39
SHISA5-216ENST00000494854 ARHGEF10LQ9HCE6 1279 aa17.46■□□□□ 0.39
SHISA5-216ENST00000494854 AMPD3Q01432 767 aa17.45■□□□□ 0.38
SHISA5-216ENST00000494854 BTNL9Q6UXG8 535 aa17.45■□□□□ 0.38
SHISA5-216ENST00000494854 FBXO11Q86XK2 927 aa17.45■□□□□ 0.38
SHISA5-216ENST00000494854 MYRIPQ8NFW9 859 aa17.45■□□□□ 0.38
SHISA5-216ENST00000494854 TRIM9Q9C026 710 aa17.45■□□□□ 0.38
SHISA5-216ENST00000494854 KIAA1683Q9H0B3 1180 aa17.45■□□□□ 0.38
SHISA5-216ENST00000494854 TMX1Q9H3N1 280 aa17.45■□□□□ 0.38
SHISA5-216ENST00000494854 EMILIN3Q9NT22 766 aa17.45■□□□□ 0.38
SHISA5-216ENST00000494854 ADD3Q9UEY8 706 aaKnown RBP17.45■□□□□ 0.38
SHISA5-216ENST00000494854 MAPK8IP1Q9UQF2 711 aa17.45■□□□□ 0.38
SHISA5-216ENST00000494854 POTEMA6NI47 508 aa17.45■□□□□ 0.38
SHISA5-216ENST00000494854 COBLO75128 1261 aa17.45■□□□□ 0.38
SHISA5-216ENST00000494854 USP14P54578 494 aa17.45■□□□□ 0.38
SHISA5-216ENST00000494854 SNAP25P60880 206 aa17.45■□□□□ 0.38
SHISA5-216ENST00000494854 GRB10Q13322 594 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms