RNA–Protein interactions for RNA: ENST00000494841.1

RPGR-210, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

TSL 1 (best)

Gene RPGR, Length 653 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-210ENST00000494841 FAM227BQ96M60 508 aa8.98□□□□□ -0.97
RPGR-210ENST00000494841 PUS7LQ9H0K6 701 aaKnown RBP8.98□□□□□ -0.97
RPGR-210ENST00000494841 ZFYVE1Q9HBF4 777 aa8.98□□□□□ -0.97
RPGR-210ENST00000494841 KCNK4Q9NYG8 393 aa8.98□□□□□ -0.97
RPGR-210ENST00000494841 PPM1HQ9ULR3 514 aa8.98□□□□□ -0.97
RPGR-210ENST00000494841 GAKO14976 1311 aa8.98□□□□□ -0.97
RPGR-210ENST00000494841 TCP10L2B9ZVM9 353 aa8.97□□□□□ -0.97
RPGR-210ENST00000494841 SORBS3O60504 671 aa8.97□□□□□ -0.97
RPGR-210ENST00000494841 CTSHP09668 335 aa8.97□□□□□ -0.97
RPGR-210ENST00000494841 SELPP16109 830 aa8.97□□□□□ -0.97
RPGR-210ENST00000494841 CD68P34810 354 aaPredicted RBP8.97□□□□□ -0.97
RPGR-210ENST00000494841 MMP14P50281 582 aa8.97□□□□□ -0.97
RPGR-210ENST00000494841 RHBDL3P58872 404 aa8.97□□□□□ -0.97
RPGR-210ENST00000494841 NMIQ13287 307 aaPredicted RBP8.97□□□□□ -0.97
RPGR-210ENST00000494841 MRPL58Q14197 206 aaKnown RBP8.97□□□□□ -0.97
RPGR-210ENST00000494841 BMP2KLQ5H9B9 411 aa8.97□□□□□ -0.97
RPGR-210ENST00000494841 PRAMEF18Q5VWM3 479 aa8.97□□□□□ -0.97
RPGR-210ENST00000494841 CWC27Q6UX04 472 aaKnown RBP8.97□□□□□ -0.97
RPGR-210ENST00000494841 CCDC129Q6ZRS4 1044 aa8.97□□□□□ -0.97
RPGR-210ENST00000494841 PNMA8AQ86V59 439 aaPredicted RBP8.97□□□□□ -0.97
RPGR-210ENST00000494841 LCORLQ8N3X6 602 aa8.97□□□□□ -0.97
RPGR-210ENST00000494841 ARMT1Q9H993 441 aa8.97□□□□□ -0.97
RPGR-210ENST00000494841 VEZTQ9HBM0 779 aa8.97□□□□□ -0.97
RPGR-210ENST00000494841 ZNF70Q9UC06 446 aaPredicted RBP8.97□□□□□ -0.97
RPGR-210ENST00000494841 MAST2Q6P0Q8 1798 aa8.96□□□□□ -0.97
RPGR-210ENST00000494841 ECM29Q5VYK3 1845 aa8.96□□□□□ -0.97
RPGR-210ENST00000494841 CDK5RAP2Q96SN8 1893 aa8.96□□□□□ -0.97
RPGR-210ENST00000494841 A0A0D9SFI3 127 aa8.96□□□□□ -0.98
RPGR-210ENST00000494841 DDX3YO15523 660 aaKnown RBP8.96□□□□□ -0.98
RPGR-210ENST00000494841 PRKAB2O43741 272 aa8.96□□□□□ -0.98
RPGR-210ENST00000494841 MYO1BO43795 1136 aa8.96□□□□□ -0.98
RPGR-210ENST00000494841 MBD4O95243 580 aa8.96□□□□□ -0.98
RPGR-210ENST00000494841 BAG3O95817 575 aa8.96□□□□□ -0.98
RPGR-210ENST00000494841 ZFYP08048 801 aaPredicted RBP8.96□□□□□ -0.98
RPGR-210ENST00000494841 CHMLP26374 656 aa8.96□□□□□ -0.98
RPGR-210ENST00000494841 ARL4DP49703 201 aa8.96□□□□□ -0.98
RPGR-210ENST00000494841 TCP10Q12799 353 aa8.96□□□□□ -0.98
RPGR-210ENST00000494841 NFIAQ12857 509 aa8.96□□□□□ -0.98
RPGR-210ENST00000494841 SUZ12Q15022 739 aaKnown RBP8.96□□□□□ -0.98
RPGR-210ENST00000494841 ZMYM1Q5SVZ6 1142 aa8.96□□□□□ -0.98
RPGR-210ENST00000494841 MAP1SQ66K74 1059 aaPredicted RBP8.96□□□□□ -0.98
RPGR-210ENST00000494841 ZFPM1Q8IX07 1006 aa8.96□□□□□ -0.98
RPGR-210ENST00000494841 TGFBRAP1Q8WUH2 860 aa8.96□□□□□ -0.98
RPGR-210ENST00000494841 APPBP2Q92624 585 aa8.96□□□□□ -0.98
RPGR-210ENST00000494841 RIOK1Q9BRS2 568 aaKnown RBP8.96□□□□□ -0.98
RPGR-210ENST00000494841 NOL10Q9BSC4 688 aaKnown RBP8.96□□□□□ -0.98
RPGR-210ENST00000494841 NRSN2Q9GZP1 204 aa8.96□□□□□ -0.98
RPGR-210ENST00000494841 IL25Q9H293 177 aa8.96□□□□□ -0.98
RPGR-210ENST00000494841 GGA3Q9NZ52 723 aa8.96□□□□□ -0.98
RPGR-210ENST00000494841 VTI1BQ9UEU0 232 aa8.96□□□□□ -0.98
RPGR-210ENST00000494841 PGAP2Q9UHJ9 254 aa8.96□□□□□ -0.98
RPGR-210ENST00000494841 ADM5C9JUS6 153 aa8.95□□□□□ -0.98
RPGR-210ENST00000494841 IGSF3O75054 1194 aa8.95□□□□□ -0.98
RPGR-210ENST00000494841 WDHD1O75717 1129 aaPredicted RBP8.95□□□□□ -0.98
RPGR-210ENST00000494841 WISP1O95388 367 aa8.95□□□□□ -0.98
RPGR-210ENST00000494841 NLRP12P59046 1061 aa8.95□□□□□ -0.98
RPGR-210ENST00000494841 PICALMQ13492 652 aa8.95□□□□□ -0.98
RPGR-210ENST00000494841 LRRFIP1Q32MZ4 808 aaKnown RBP8.95□□□□□ -0.98
RPGR-210ENST00000494841 MCMDC2Q4G0Z9 681 aa8.95□□□□□ -0.98
RPGR-210ENST00000494841 IGF2-ASQ6U949 168 aa8.95□□□□□ -0.98
RPGR-210ENST00000494841 USP48Q86UV5 1035 aa8.95□□□□□ -0.98
RPGR-210ENST00000494841 LDHDQ86WU2 507 aa8.95□□□□□ -0.98
RPGR-210ENST00000494841 MAPKAPK5Q8IW41 473 aa8.95□□□□□ -0.98
RPGR-210ENST00000494841 TEX11Q8IYF3 940 aa8.95□□□□□ -0.98
RPGR-210ENST00000494841 SDR42E1Q8WUS8 393 aa8.95□□□□□ -0.98
RPGR-210ENST00000494841 DCPSQ96C86 337 aaKnown RBP8.95□□□□□ -0.98
RPGR-210ENST00000494841 CRELD1Q96HD1 420 aa8.95□□□□□ -0.98
RPGR-210ENST00000494841 STRBPQ96SI9 672 aaKnown RBP8.95□□□□□ -0.98
RPGR-210ENST00000494841 TRIM56Q9BRZ2 755 aaKnown RBP8.95□□□□□ -0.98
RPGR-210ENST00000494841 GLIS2Q9BZE0 524 aaPredicted RBP8.95□□□□□ -0.98
RPGR-210ENST00000494841 DDX4Q9NQI0 724 aaKnown RBP8.95□□□□□ -0.98
RPGR-210ENST00000494841 DIAPH3Q9NSV4 1193 aa8.95□□□□□ -0.98
RPGR-210ENST00000494841 TRAF5O00463 557 aa8.94□□□□□ -0.98
RPGR-210ENST00000494841 GPAA1O43292 621 aa8.94□□□□□ -0.98
RPGR-210ENST00000494841 FBXO24O75426 580 aa8.94□□□□□ -0.98
RPGR-210ENST00000494841 GDF11O95390 407 aa8.94□□□□□ -0.98
RPGR-210ENST00000494841 CHRNA4P43681 627 aa8.94□□□□□ -0.98
RPGR-210ENST00000494841 ZNF157P51786 506 aaPredicted RBP8.94□□□□□ -0.98
RPGR-210ENST00000494841 GSTM4Q03013 218 aa8.94□□□□□ -0.98
RPGR-210ENST00000494841 RASA3Q14644 834 aa8.94□□□□□ -0.98
RPGR-210ENST00000494841 SLC4A8Q2Y0W8 1093 aa8.94□□□□□ -0.98
RPGR-210ENST00000494841 MEI1Q5TIA1 1274 aa8.94□□□□□ -0.98
RPGR-210ENST00000494841 VPS53Q5VIR6 699 aa8.94□□□□□ -0.98
RPGR-210ENST00000494841 ZNF589Q86UQ0 364 aaPredicted RBP8.94□□□□□ -0.98
RPGR-210ENST00000494841 UBASH3BQ8TF42 649 aa8.94□□□□□ -0.98
RPGR-210ENST00000494841 LENG1Q96BZ8 264 aaPredicted RBP8.94□□□□□ -0.98
RPGR-210ENST00000494841 TMEM39BQ9GZU3 492 aa8.94□□□□□ -0.98
RPGR-210ENST00000494841 DEFB129Q9H1M3 183 aa8.94□□□□□ -0.98
RPGR-210ENST00000494841 HELLSQ9NRZ9 838 aa8.94□□□□□ -0.98
RPGR-210ENST00000494841 SAP30BPQ9UHR5 308 aaKnown RBP8.94□□□□□ -0.98
RPGR-210ENST00000494841 GPN3Q9UHW5 284 aaPredicted RBP8.94□□□□□ -0.98
RPGR-210ENST00000494841 SLC4A4Q9Y6R1 1079 aa8.94□□□□□ -0.98
RPGR-210ENST00000494841 CNTNAP1P78357 1384 aa8.94□□□□□ -0.98
RPGR-210ENST00000494841 BAZ2AQ9UIF9 1905 aaKnown RBP8.93□□□□□ -0.98
RPGR-210ENST00000494841 HIP1O00291 1037 aa8.93□□□□□ -0.98
RPGR-210ENST00000494841 APPP05067 770 aa8.93□□□□□ -0.98
RPGR-210ENST00000494841 ITGB2P05107 769 aa8.93□□□□□ -0.98
RPGR-210ENST00000494841 TMED8Q6PL24 325 aaPredicted RBP8.93□□□□□ -0.98
RPGR-210ENST00000494841 CDC37L1Q7L3B6 337 aa8.93□□□□□ -0.98
RPGR-210ENST00000494841 KRT26Q7Z3Y9 468 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms