RNA–Protein interactions for RNA: ENST00000494667.5

PRKD3-210, Transcript of protein kinase D3, humanhuman

TSL 1 (best)

Gene PRKD3, Length 4,326 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-210ENST00000494667 PLAGL2Q9UPG8 496 aa5.27□□□□□ -1.57
PRKD3-210ENST00000494667 LRCH1Q9Y2L9 728 aa5.27□□□□□ -1.57
PRKD3-210ENST00000494667 FPGT-TNNI3KV9GXZ4 949 aa5.27□□□□□ -1.57
PRKD3-210ENST00000494667 MYH1P12882 1939 aa5.27□□□□□ -1.57
PRKD3-210ENST00000494667 SSU72P8A0A1W2PR75 194 aa5.27□□□□□ -1.57
PRKD3-210ENST00000494667 PALM3A6NDB9 673 aaPredicted RBP5.27□□□□□ -1.57
PRKD3-210ENST00000494667 SPDYE5A6NIY4 337 aa5.27□□□□□ -1.57
PRKD3-210ENST00000494667 ZNF263O14978 683 aa5.27□□□□□ -1.57
PRKD3-210ENST00000494667 FOXP2O15409 715 aa5.27□□□□□ -1.57
PRKD3-210ENST00000494667 SART1O43290 800 aaKnown RBP5.27□□□□□ -1.57
PRKD3-210ENST00000494667 SNX3O60493 162 aa5.27□□□□□ -1.57
PRKD3-210ENST00000494667 HEXIM1O94992 359 aaKnown RBP5.27□□□□□ -1.57
PRKD3-210ENST00000494667 FBLN1P23142 703 aa5.27□□□□□ -1.57
PRKD3-210ENST00000494667 PEX5P50542 639 aa5.27□□□□□ -1.57
PRKD3-210ENST00000494667 LACTBP83111 547 aaPredicted RBP5.27□□□□□ -1.57
PRKD3-210ENST00000494667 ATP11AP98196 1134 aa5.27□□□□□ -1.57
PRKD3-210ENST00000494667 GUCY1B3Q02153 619 aa5.27□□□□□ -1.57
PRKD3-210ENST00000494667 MKRN3Q13064 507 aaKnown RBP5.27□□□□□ -1.57
PRKD3-210ENST00000494667 RBM26Q5T8P6 1007 aaKnown RBP5.27□□□□□ -1.57
PRKD3-210ENST00000494667 KLHDC7AQ5VTJ3 777 aa5.27□□□□□ -1.57
PRKD3-210ENST00000494667 COL23A1Q86Y22 540 aaPredicted RBP5.27□□□□□ -1.57
PRKD3-210ENST00000494667 ACTRT1Q8TDG2 376 aa5.27□□□□□ -1.57
PRKD3-210ENST00000494667 STK32AQ8WU08 396 aa5.27□□□□□ -1.57
PRKD3-210ENST00000494667 SYN2Q92777 582 aaPredicted RBP5.27□□□□□ -1.57
PRKD3-210ENST00000494667 GATA6Q92908 595 aa5.27□□□□□ -1.57
PRKD3-210ENST00000494667 CAPZA3Q96KX2 299 aa5.27□□□□□ -1.57
PRKD3-210ENST00000494667 SETDB2Q96T68 719 aa5.27□□□□□ -1.57
PRKD3-210ENST00000494667 RXFP1Q9HBX9 757 aa5.27□□□□□ -1.57
PRKD3-210ENST00000494667 CNOT7Q9UIV1 285 aaKnown RBP5.27□□□□□ -1.57
PRKD3-210ENST00000494667 NFU1Q9UMS0 254 aa5.27□□□□□ -1.57
PRKD3-210ENST00000494667 CTDP1Q9Y5B0 961 aaPredicted RBP5.27□□□□□ -1.57
PRKD3-210ENST00000494667 NR2E3Q9Y5X4 410 aa5.27□□□□□ -1.57
PRKD3-210ENST00000494667 MYH6P13533 1939 aa5.26□□□□□ -1.57
PRKD3-210ENST00000494667 GRM8O00222 908 aa5.26□□□□□ -1.57
PRKD3-210ENST00000494667 WDR46O15213 610 aaKnown RBP5.26□□□□□ -1.57
PRKD3-210ENST00000494667 POLR2DO15514 142 aaKnown RBP5.26□□□□□ -1.57
PRKD3-210ENST00000494667 ATP9BO43861 1147 aa5.26□□□□□ -1.57
PRKD3-210ENST00000494667 MMP1P03956 469 aa5.26□□□□□ -1.57
PRKD3-210ENST00000494667 TPBGLP0DKB5 382 aa5.26□□□□□ -1.57
PRKD3-210ENST00000494667 CSB-PGBD3P0DP91 1061 aa5.26□□□□□ -1.57
PRKD3-210ENST00000494667 PPP1R2P41236 205 aa5.26□□□□□ -1.57
PRKD3-210ENST00000494667 RPL26P61254 145 aaKnown RBP5.26□□□□□ -1.57
PRKD3-210ENST00000494667 PAK1Q13153 545 aa5.26□□□□□ -1.57
PRKD3-210ENST00000494667 FOXB2Q5VYV0 432 aa5.26□□□□□ -1.57
PRKD3-210ENST00000494667 IL17REQ8NFR9 667 aa5.26□□□□□ -1.57
PRKD3-210ENST00000494667 ARHGEF1Q92888 912 aaKnown RBP5.26□□□□□ -1.57
PRKD3-210ENST00000494667 MAML3Q96JK9 1138 aa5.26□□□□□ -1.57
PRKD3-210ENST00000494667 ALG1Q9BT22 464 aa5.26□□□□□ -1.57
PRKD3-210ENST00000494667 UBE2OQ9C0C9 1292 aaKnown RBP5.26□□□□□ -1.57
PRKD3-210ENST00000494667 BOLA2Q9H3K6 86 aa5.26□□□□□ -1.57
PRKD3-210ENST00000494667 RABEP2Q9H5N1 569 aa5.26□□□□□ -1.57
PRKD3-210ENST00000494667 DBF4Q9UBU7 674 aaPredicted RBP5.26□□□□□ -1.57
PRKD3-210ENST00000494667 TTC7AQ9ULT0 858 aaPredicted RBP5.26□□□□□ -1.57
PRKD3-210ENST00000494667 GLI3P10071 1580 aa5.26□□□□□ -1.57
PRKD3-210ENST00000494667 MAST3O60307 1309 aa5.26□□□□□ -1.57
PRKD3-210ENST00000494667 GTPBP6O43824 516 aaPredicted RBP5.26□□□□□ -1.57
PRKD3-210ENST00000494667 PEX11AO75192 247 aa5.26□□□□□ -1.57
PRKD3-210ENST00000494667 SSBP05455 408 aaKnown RBP eCLIP5.26□□□□□ -1.57
PRKD3-210ENST00000494667 TMOD1P28289 359 aa5.26□□□□□ -1.57
PRKD3-210ENST00000494667 RANBP1P43487 201 aa5.26□□□□□ -1.57
PRKD3-210ENST00000494667 TNNC1P63316 161 aa5.26□□□□□ -1.57
PRKD3-210ENST00000494667 ZRSR2Q15696 482 aaKnown RBP5.26□□□□□ -1.57
PRKD3-210ENST00000494667 SH2D4BQ5SQS7 431 aa5.26□□□□□ -1.57
PRKD3-210ENST00000494667 MFSD5Q6N075 450 aa5.26□□□□□ -1.57
PRKD3-210ENST00000494667 AGGF1Q8N302 714 aaeCLIP5.26□□□□□ -1.57
PRKD3-210ENST00000494667 RBBP8NLQ8NC74 664 aaPredicted RBP5.26□□□□□ -1.57
PRKD3-210ENST00000494667 ZNF333Q96JL9 665 aa5.26□□□□□ -1.57
PRKD3-210ENST00000494667 RMDN2Q96LZ7 410 aa5.26□□□□□ -1.57
PRKD3-210ENST00000494667 TBCCD1Q9NVR7 557 aa5.26□□□□□ -1.57
PRKD3-210ENST00000494667 NUB1Q9Y5A7 615 aa5.26□□□□□ -1.57
PRKD3-210ENST00000494667 LTN1O94822 1766 aa5.26□□□□□ -1.57
PRKD3-210ENST00000494667 ANKRD36CQ5JPF3 1778 aa5.26□□□□□ -1.57
PRKD3-210ENST00000494667 F8VZ95 297 aa5.26□□□□□ -1.57
PRKD3-210ENST00000494667 HNRNPCL1O60812 293 aaKnown RBP5.26□□□□□ -1.57
PRKD3-210ENST00000494667 TUBP50607 506 aa5.26□□□□□ -1.57
PRKD3-210ENST00000494667 PDE6CP51160 858 aa5.26□□□□□ -1.57
PRKD3-210ENST00000494667 SKIDA1Q1XH10 827 aa5.26□□□□□ -1.57
PRKD3-210ENST00000494667 MEI1Q5TIA1 1274 aa5.26□□□□□ -1.57
PRKD3-210ENST00000494667 PDXDC2PQ6P474 469 aa5.26□□□□□ -1.57
PRKD3-210ENST00000494667 TMC3Q7Z5M5 1100 aa5.26□□□□□ -1.57
PRKD3-210ENST00000494667 CPLX4Q7Z7G2 160 aa5.26□□□□□ -1.57
PRKD3-210ENST00000494667 HOOK3Q86VS8 718 aa5.26□□□□□ -1.57
PRKD3-210ENST00000494667 MYLK4Q86YV6 388 aaPredicted RBP5.26□□□□□ -1.57
PRKD3-210ENST00000494667 SUCLG2Q96I99 432 aa5.26□□□□□ -1.57
PRKD3-210ENST00000494667 MIS12Q9H081 205 aa5.26□□□□□ -1.57
PRKD3-210ENST00000494667 SLITRK6Q9H5Y7 841 aa5.26□□□□□ -1.57
PRKD3-210ENST00000494667 JADE2Q9NQC1 790 aa5.26□□□□□ -1.57
PRKD3-210ENST00000494667 LAMB1P07942 1786 aa5.25□□□□□ -1.57
PRKD3-210ENST00000494667 PI4KAP2A4QPH2 592 aa5.25□□□□□ -1.57
PRKD3-210ENST00000494667 GOLGA8BA8MQT2 603 aa5.25□□□□□ -1.57
PRKD3-210ENST00000494667 CCDC188H7C350 402 aa5.25□□□□□ -1.57
PRKD3-210ENST00000494667 MAP3K13O43283 966 aa5.25□□□□□ -1.57
PRKD3-210ENST00000494667 EVI5O60447 810 aa5.25□□□□□ -1.57
PRKD3-210ENST00000494667 TMCC1O94876 653 aa5.25□□□□□ -1.57
PRKD3-210ENST00000494667 AGTP01019 485 aa5.25□□□□□ -1.57
PRKD3-210ENST00000494667 KRT16P08779 473 aa5.25□□□□□ -1.57
PRKD3-210ENST00000494667 DESP17661 470 aa5.25□□□□□ -1.57
PRKD3-210ENST00000494667 KCNJ2P63252 427 aa5.25□□□□□ -1.57
PRKD3-210ENST00000494667 DBN1Q16643 649 aa5.25□□□□□ -1.57
PRKD3-210ENST00000494667 TSR1Q2NL82 804 aaKnown RBP5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms