RNA–Protein interactions for RNA: ENST00000494649.5

APTX-230, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 2,099 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-230ENST00000494649 M0R2N6 131 aa12.68□□□□□ -0.38
APTX-230ENST00000494649 CTAGE5O15320 804 aa12.68□□□□□ -0.38
APTX-230ENST00000494649 GGPS1O95749 300 aa12.68□□□□□ -0.38
APTX-230ENST00000494649 ARP10275 920 aa12.68□□□□□ -0.38
APTX-230ENST00000494649 KRT2P35908 639 aa12.68□□□□□ -0.38
APTX-230ENST00000494649 RGS19P49795 217 aa12.68□□□□□ -0.38
APTX-230ENST00000494649 GNPTABQ3T906 1256 aa12.68□□□□□ -0.38
APTX-230ENST00000494649 HSCBQ8IWL3 235 aa12.68□□□□□ -0.38
APTX-230ENST00000494649 KIAA1217Q5T5P2 1943 aa12.68□□□□□ -0.38
APTX-230ENST00000494649 CCDC194A0A1B0GVG4 234 aa12.68□□□□□ -0.38
APTX-230ENST00000494649 DDX39AO00148 427 aaKnown RBP12.68□□□□□ -0.38
APTX-230ENST00000494649 EDIL3O43854 480 aa12.68□□□□□ -0.38
APTX-230ENST00000494649 ATP2B1P20020 1258 aa12.68□□□□□ -0.38
APTX-230ENST00000494649 FSCN1Q16658 493 aaKnown RBP12.68□□□□□ -0.38
APTX-230ENST00000494649 LETM2Q2VYF4 491 aa12.68□□□□□ -0.38
APTX-230ENST00000494649 PRR16Q569H4 304 aa12.68□□□□□ -0.38
APTX-230ENST00000494649 CXCL17Q6UXB2 119 aa12.68□□□□□ -0.38
APTX-230ENST00000494649 CYFIP1Q7L576 1253 aa12.68□□□□□ -0.38
APTX-230ENST00000494649 DHX37Q8IY37 1157 aaKnown RBP12.68□□□□□ -0.38
APTX-230ENST00000494649 DAGLBQ8NCG7 672 aa12.68□□□□□ -0.38
APTX-230ENST00000494649 ARRDC4Q8NCT1 418 aa12.68□□□□□ -0.38
APTX-230ENST00000494649 AFG1LQ8WV93 481 aa12.68□□□□□ -0.38
APTX-230ENST00000494649 VTI1AQ96AJ9 217 aa12.68□□□□□ -0.38
APTX-230ENST00000494649 SPC25Q9HBM1 224 aa12.68□□□□□ -0.38
APTX-230ENST00000494649 MYH7BA7E2Y1 1941 aa12.67□□□□□ -0.38
APTX-230ENST00000494649 DOCK5Q9H7D0 1870 aa12.67□□□□□ -0.38
APTX-230ENST00000494649 DNM1LO00429 736 aa12.67□□□□□ -0.38
APTX-230ENST00000494649 FIBPO43427 364 aa12.67□□□□□ -0.38
APTX-230ENST00000494649 TDP2O95551 362 aa12.67□□□□□ -0.38
APTX-230ENST00000494649 ASGR1P07306 291 aa12.67□□□□□ -0.38
APTX-230ENST00000494649 GJA9P57773 515 aa12.67□□□□□ -0.38
APTX-230ENST00000494649 NONOQ15233 471 aaKnown RBP eCLIP12.67□□□□□ -0.38
APTX-230ENST00000494649 HSDL1Q3SXM5 330 aa12.67□□□□□ -0.38
APTX-230ENST00000494649 CEP55Q53EZ4 464 aa12.67□□□□□ -0.38
APTX-230ENST00000494649 NLRX1Q86UT6 975 aa12.67□□□□□ -0.38
APTX-230ENST00000494649 MXRA8Q9BRK3 442 aa12.67□□□□□ -0.38
APTX-230ENST00000494649 C11orf49Q9H6J7 331 aa12.67□□□□□ -0.38
APTX-230ENST00000494649 MLXIPQ9HAP2 919 aa12.67□□□□□ -0.38
APTX-230ENST00000494649 KCNH7Q9NS40 1196 aa12.67□□□□□ -0.38
APTX-230ENST00000494649 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.67□□□□□ -0.38
APTX-230ENST00000494649 UBIAD1Q9Y5Z9 338 aa12.67□□□□□ -0.38
APTX-230ENST00000494649 TNRC18O15417 2968 aaPredicted RBP12.67□□□□□ -0.38
APTX-230ENST00000494649 SPATA31C2B4DYI2 1134 aa12.66□□□□□ -0.38
APTX-230ENST00000494649 KIF28PB7ZC32 967 aa12.66□□□□□ -0.38
APTX-230ENST00000494649 GH1P01241 217 aa12.66□□□□□ -0.38
APTX-230ENST00000494649 MYL3P08590 195 aa12.66□□□□□ -0.38
APTX-230ENST00000494649 PSMC6P62333 389 aa12.66□□□□□ -0.38
APTX-230ENST00000494649 ARHGAP1Q07960 439 aa12.66□□□□□ -0.38
APTX-230ENST00000494649 GNL2Q13823 731 aaKnown RBP12.66□□□□□ -0.38
APTX-230ENST00000494649 MCTP1Q6DN14 999 aa12.66□□□□□ -0.38
APTX-230ENST00000494649 NECAB2Q7Z6G3 386 aa12.66□□□□□ -0.38
APTX-230ENST00000494649 PLA2G4DQ86XP0 818 aa12.66□□□□□ -0.38
APTX-230ENST00000494649 CRYGNQ8WXF5 182 aa12.66□□□□□ -0.38
APTX-230ENST00000494649 SPATA33Q96N06 139 aa12.66□□□□□ -0.38
APTX-230ENST00000494649 BRMS1Q9HCU9 246 aa12.66□□□□□ -0.38
APTX-230ENST00000494649 JADE2Q9NQC1 790 aa12.66□□□□□ -0.38
APTX-230ENST00000494649 WNT7AO00755 349 aa12.66□□□□□ -0.38
APTX-230ENST00000494649 HSP90AA1P07900 732 aaKnown RBP12.66□□□□□ -0.38
APTX-230ENST00000494649 ZNF286BP0CG31 522 aa12.66□□□□□ -0.38
APTX-230ENST00000494649 ACLYP53396 1101 aa12.66□□□□□ -0.38
APTX-230ENST00000494649 CUL4AQ13619 759 aa12.66□□□□□ -0.38
APTX-230ENST00000494649 GALNT17Q6IS24 598 aa12.66□□□□□ -0.38
APTX-230ENST00000494649 KLHDC9Q8NEP7 349 aa12.66□□□□□ -0.38
APTX-230ENST00000494649 FBXO18Q8NFZ0 1043 aa12.66□□□□□ -0.38
APTX-230ENST00000494649 A0A1W2PQ45 241 aaPredicted RBP12.65□□□□□ -0.38
APTX-230ENST00000494649 A0A1W2PQY0 241 aa12.65□□□□□ -0.38
APTX-230ENST00000494649 RBAK-RBAKDNI3L0D1 243 aa12.65□□□□□ -0.38
APTX-230ENST00000494649 STAM2O75886 525 aa12.65□□□□□ -0.38
APTX-230ENST00000494649 SAFBQ15424 915 aaKnown RBP eCLIP12.65□□□□□ -0.38
APTX-230ENST00000494649 CELF3Q5SZQ8 465 aaKnown RBP12.65□□□□□ -0.38
APTX-230ENST00000494649 MYSM1Q5VVJ2 828 aa12.65□□□□□ -0.38
APTX-230ENST00000494649 CCSAPQ6IQ19 270 aaPredicted RBP12.65□□□□□ -0.38
APTX-230ENST00000494649 KRT25Q7Z3Z0 450 aa12.65□□□□□ -0.38
APTX-230ENST00000494649 UBE2Q1Q7Z7E8 422 aa12.65□□□□□ -0.38
APTX-230ENST00000494649 TNFRSF25Q93038 417 aa12.65□□□□□ -0.38
APTX-230ENST00000494649 SNX21Q969T3 373 aa12.65□□□□□ -0.38
APTX-230ENST00000494649 GPRASP2Q96D09 838 aa12.65□□□□□ -0.38
APTX-230ENST00000494649 UPF3AQ9H1J1 476 aaKnown RBP12.65□□□□□ -0.38
APTX-230ENST00000494649 IGLV3-22A0A075B6J6 115 aa12.65□□□□□ -0.39
APTX-230ENST00000494649 H3BQV1 296 aa12.65□□□□□ -0.39
APTX-230ENST00000494649 CCNT1O60563 726 aaKnown RBP12.65□□□□□ -0.39
APTX-230ENST00000494649 MMP3P08254 477 aa12.65□□□□□ -0.39
APTX-230ENST00000494649 KCNA2P16389 499 aa12.65□□□□□ -0.39
APTX-230ENST00000494649 ITGB3BPQ13352 177 aaPredicted RBP12.65□□□□□ -0.39
APTX-230ENST00000494649 LARP1BQ659C4 914 aaKnown RBP12.65□□□□□ -0.39
APTX-230ENST00000494649 XRRA1Q6P2D8 792 aa12.65□□□□□ -0.39
APTX-230ENST00000494649 VPS37CA5D8V6 355 aaPredicted RBP12.64□□□□□ -0.39
APTX-230ENST00000494649 MEIS1O00470 390 aa12.64□□□□□ -0.39
APTX-230ENST00000494649 NOP56O00567 594 aaKnown RBP12.64□□□□□ -0.39
APTX-230ENST00000494649 NKRFO15226 690 aaKnown RBP eCLIP12.64□□□□□ -0.39
APTX-230ENST00000494649 SLC37A4O43826 429 aa12.64□□□□□ -0.39
APTX-230ENST00000494649 COL6A1P12109 1028 aa12.64□□□□□ -0.39
APTX-230ENST00000494649 ICAM3P32942 547 aa12.64□□□□□ -0.39
APTX-230ENST00000494649 CPT1AP50416 773 aa12.64□□□□□ -0.39
APTX-230ENST00000494649 NBR1Q14596 966 aa12.64□□□□□ -0.39
APTX-230ENST00000494649 LRRC26Q2I0M4 334 aa12.64□□□□□ -0.39
APTX-230ENST00000494649 NEK8Q86SG6 692 aa12.64□□□□□ -0.39
APTX-230ENST00000494649 TRIM50Q86XT4 487 aa12.64□□□□□ -0.39
APTX-230ENST00000494649 ANKLE1Q8NAG6 615 aa12.64□□□□□ -0.39
APTX-230ENST00000494649 DPF3Q92784 378 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms