RNA–Protein interactions for RNA: ENST00000494613.5

LIMS2-216, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 1,137 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-216ENST00000494613 ALG1Q9BT22 464 aa17.96■□□□□ 0.47
LIMS2-216ENST00000494613 KIAA1217Q5T5P2 1943 aa17.96■□□□□ 0.47
LIMS2-216ENST00000494613 FRMPD4Q14CM0 1322 aa17.96■□□□□ 0.46
LIMS2-216ENST00000494613 KLF18A0A0U1RQI7 1052 aa17.95■□□□□ 0.46
LIMS2-216ENST00000494613 HAS3O00219 553 aa17.95■□□□□ 0.46
LIMS2-216ENST00000494613 REC8O95072 547 aa17.95■□□□□ 0.46
LIMS2-216ENST00000494613 HOXD8P13378 290 aaPredicted RBP17.95■□□□□ 0.46
LIMS2-216ENST00000494613 CDC27P30260 824 aa17.95■□□□□ 0.46
LIMS2-216ENST00000494613 ADD1P35611 737 aaKnown RBP17.95■□□□□ 0.46
LIMS2-216ENST00000494613 PSEN2P49810 448 aa17.95■□□□□ 0.46
LIMS2-216ENST00000494613 FGD1P98174 961 aa17.95■□□□□ 0.46
LIMS2-216ENST00000494613 PTGISQ16647 500 aa17.95■□□□□ 0.46
LIMS2-216ENST00000494613 RTN1Q16799 776 aa17.95■□□□□ 0.46
LIMS2-216ENST00000494613 GNPTABQ3T906 1256 aa17.95■□□□□ 0.46
LIMS2-216ENST00000494613 ZNF697Q5TEC3 545 aa17.95■□□□□ 0.46
LIMS2-216ENST00000494613 PCNX4Q63HM2 1172 aa17.95■□□□□ 0.46
LIMS2-216ENST00000494613 GDF6Q6KF10 455 aaPredicted RBP17.95■□□□□ 0.46
LIMS2-216ENST00000494613 XRRA1Q6P2D8 792 aa17.95■□□□□ 0.46
LIMS2-216ENST00000494613 Q6ZUG5 572 aa17.95■□□□□ 0.46
LIMS2-216ENST00000494613 SESTD1Q86VW0 696 aa17.95■□□□□ 0.46
LIMS2-216ENST00000494613 PPP4R2Q9NY27 417 aa17.95■□□□□ 0.46
LIMS2-216ENST00000494613 HDAC6Q9UBN7 1215 aa17.95■□□□□ 0.46
LIMS2-216ENST00000494613 GRXCR1A8MXD5 290 aa17.94■□□□□ 0.46
LIMS2-216ENST00000494613 UBA1P22314 1058 aaKnown RBP17.94■□□□□ 0.46
LIMS2-216ENST00000494613 APOBRQ0VD83 1088 aa17.94■□□□□ 0.46
LIMS2-216ENST00000494613 SEMA3FQ13275 785 aa17.94■□□□□ 0.46
LIMS2-216ENST00000494613 KIAA0753Q2KHM9 967 aa17.94■□□□□ 0.46
LIMS2-216ENST00000494613 PSRC1Q6PGN9 363 aaPredicted RBP17.94■□□□□ 0.46
LIMS2-216ENST00000494613 BLOC1S2Q6QNY1 142 aa17.94■□□□□ 0.46
LIMS2-216ENST00000494613 CYFIP1Q7L576 1253 aa17.94■□□□□ 0.46
LIMS2-216ENST00000494613 OTOP2Q7RTS6 562 aa17.94■□□□□ 0.46
LIMS2-216ENST00000494613 HEATR3Q7Z4Q2 680 aa17.94■□□□□ 0.46
LIMS2-216ENST00000494613 RETREG2Q8NC44 543 aa17.94■□□□□ 0.46
LIMS2-216ENST00000494613 CTAGE1Q96RT6 745 aa17.94■□□□□ 0.46
LIMS2-216ENST00000494613 CXXC1Q9P0U4 656 aaPredicted RBP17.94■□□□□ 0.46
LIMS2-216ENST00000494613 NAP1L2Q9ULW6 460 aaPredicted RBP17.94■□□□□ 0.46
LIMS2-216ENST00000494613 PCDHA6Q9UN73 950 aa17.94■□□□□ 0.46
LIMS2-216ENST00000494613 NOD1Q9Y239 953 aa17.94■□□□□ 0.46
LIMS2-216ENST00000494613 STXBP5LQ9Y2K9 1186 aa17.94■□□□□ 0.46
LIMS2-216ENST00000494613 PCDHA8Q9Y5H6 950 aa17.94■□□□□ 0.46
LIMS2-216ENST00000494613 SCN10AQ9Y5Y9 1956 aa17.93■□□□□ 0.46
LIMS2-216ENST00000494613 GOLGA8AA7E2F4 631 aa17.93■□□□□ 0.46
LIMS2-216ENST00000494613 GOLGA8BA8MQT2 603 aa17.93■□□□□ 0.46
LIMS2-216ENST00000494613 FIBPO43427 364 aa17.93■□□□□ 0.46
LIMS2-216ENST00000494613 IQCF3P0C7M6 154 aa17.93■□□□□ 0.46
LIMS2-216ENST00000494613 ZNF286BP0CG31 522 aa17.93■□□□□ 0.46
LIMS2-216ENST00000494613 NEDD9Q14511 834 aa17.93■□□□□ 0.46
LIMS2-216ENST00000494613 MFSD10Q14728 455 aa17.93■□□□□ 0.46
LIMS2-216ENST00000494613 UBE2SQ16763 222 aa17.93■□□□□ 0.46
LIMS2-216ENST00000494613 C7orf31Q8N865 590 aa17.93■□□□□ 0.46
LIMS2-216ENST00000494613 GUCD1Q96NT3 240 aa17.93■□□□□ 0.46
LIMS2-216ENST00000494613 C16orf70Q9BSU1 422 aa17.93■□□□□ 0.46
LIMS2-216ENST00000494613 KATNAL1Q9BW62 490 aa17.93■□□□□ 0.46
LIMS2-216ENST00000494613 USP26Q9BXU7 913 aa17.93■□□□□ 0.46
LIMS2-216ENST00000494613 TTYH1Q9H313 450 aaPredicted RBP17.93■□□□□ 0.46
LIMS2-216ENST00000494613 MYH7BA7E2Y1 1941 aa17.93■□□□□ 0.46
LIMS2-216ENST00000494613 PITPNM1O00562 1244 aa17.92■□□□□ 0.46
LIMS2-216ENST00000494613 F2P00734 622 aa17.92■□□□□ 0.46
LIMS2-216ENST00000494613 PSMA5P28066 241 aa17.92■□□□□ 0.46
LIMS2-216ENST00000494613 BFSP2Q13515 415 aa17.92■□□□□ 0.46
LIMS2-216ENST00000494613 ERICH6BQ5W0A0 696 aa17.92■□□□□ 0.46
LIMS2-216ENST00000494613 WWC2Q6AWC2 1192 aa17.92■□□□□ 0.46
LIMS2-216ENST00000494613 DEFB128Q7Z7B8 93 aa17.92■□□□□ 0.46
LIMS2-216ENST00000494613 NLRX1Q86UT6 975 aa17.92■□□□□ 0.46
LIMS2-216ENST00000494613 FBXL16Q8N461 479 aa17.92■□□□□ 0.46
LIMS2-216ENST00000494613 BRF1Q92994 677 aa17.92■□□□□ 0.46
LIMS2-216ENST00000494613 SENP7Q9BQF6 1050 aa17.92■□□□□ 0.46
LIMS2-216ENST00000494613 GTF2IRD1Q9UHL9 959 aa17.92■□□□□ 0.46
LIMS2-216ENST00000494613 CNTNAP5Q8WYK1 1306 aa17.92■□□□□ 0.46
LIMS2-216ENST00000494613 H3BRB1 525 aa17.91■□□□□ 0.46
LIMS2-216ENST00000494613 ATP9AO75110 1047 aa17.91■□□□□ 0.46
LIMS2-216ENST00000494613 RPS6KB1P23443 525 aa17.91■□□□□ 0.46
LIMS2-216ENST00000494613 RCAN1P53805 252 aa17.91■□□□□ 0.46
LIMS2-216ENST00000494613 ZNF200P98182 395 aaPredicted RBP17.91■□□□□ 0.46
LIMS2-216ENST00000494613 TYW1BQ6NUM6 668 aa17.91■□□□□ 0.46
LIMS2-216ENST00000494613 CDX2Q99626 313 aaPredicted RBP17.91■□□□□ 0.46
LIMS2-216ENST00000494613 TUT1Q9H6E5 874 aaKnown RBP17.91■□□□□ 0.46
LIMS2-216ENST00000494613 RIC8AQ9NPQ8 531 aa17.91■□□□□ 0.46
LIMS2-216ENST00000494613 TELO2Q9Y4R8 837 aa17.91■□□□□ 0.46
LIMS2-216ENST00000494613 CCDC196A0A1B0GTZ2 297 aa17.9■□□□□ 0.46
LIMS2-216ENST00000494613 SMCO2A6NFE2 343 aa17.9■□□□□ 0.46
LIMS2-216ENST00000494613 SPDYE3A6NKU9 549 aa17.9■□□□□ 0.46
LIMS2-216ENST00000494613 EPB41L2O43491 1005 aaKnown RBP17.9■□□□□ 0.46
LIMS2-216ENST00000494613 ITGB5P18084 799 aa17.9■□□□□ 0.46
LIMS2-216ENST00000494613 DNAJB2P25686 324 aa17.9■□□□□ 0.46
LIMS2-216ENST00000494613 PBX2P40425 430 aa17.9■□□□□ 0.46
LIMS2-216ENST00000494613 METAP2P50579 478 aaKnown RBP eCLIP17.9■□□□□ 0.46
LIMS2-216ENST00000494613 NAPAP54920 295 aa17.9■□□□□ 0.46
LIMS2-216ENST00000494613 HIC1Q14526 733 aa17.9■□□□□ 0.46
LIMS2-216ENST00000494613 METTL7BQ6UX53 244 aa17.9■□□□□ 0.46
LIMS2-216ENST00000494613 GPR20Q99678 358 aa17.9■□□□□ 0.46
LIMS2-216ENST00000494613 AGXT2Q9BYV1 514 aa17.9■□□□□ 0.46
LIMS2-216ENST00000494613 MTIF3Q9H2K0 278 aaKnown RBP17.9■□□□□ 0.46
LIMS2-216ENST00000494613 BARHL2Q9NY43 387 aa17.9■□□□□ 0.46
LIMS2-216ENST00000494613 UBIAD1Q9Y5Z9 338 aa17.9■□□□□ 0.46
LIMS2-216ENST00000494613 STXBP3O00186 592 aa17.89■□□□□ 0.45
LIMS2-216ENST00000494613 NOP56O00567 594 aaKnown RBP17.89■□□□□ 0.45
LIMS2-216ENST00000494613 MAFGO15525 162 aa17.89■□□□□ 0.45
LIMS2-216ENST00000494613 RFC2P35250 354 aa17.89■□□□□ 0.45
LIMS2-216ENST00000494613 GPNMBQ14956 572 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms