RNA–Protein interactions for RNA: ENST00000494402.5

SNX13-210, Transcript of sorting nexin 13, humanhuman

TSL 3

Gene SNX13, Length 453 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-210ENST00000494402 PDGFDQ9GZP0 370 aaPredicted RBP7.91□□□□□ -1.14
SNX13-210ENST00000494402 EMC9Q9Y3B6 208 aa7.91□□□□□ -1.14
SNX13-210ENST00000494402 WASF2Q9Y6W5 498 aa7.91□□□□□ -1.14
SNX13-210ENST00000494402 GTPBP10A4D1E9 387 aaKnown RBP7.9□□□□□ -1.14
SNX13-210ENST00000494402 EIF3FO00303 357 aaPredicted RBP7.9□□□□□ -1.14
SNX13-210ENST00000494402 TRAF5O00463 557 aa7.9□□□□□ -1.14
SNX13-210ENST00000494402 H2AFYO75367 372 aaKnown RBP7.9□□□□□ -1.14
SNX13-210ENST00000494402 POU2F2P09086 479 aa7.9□□□□□ -1.14
SNX13-210ENST00000494402 MSX1P28360 303 aa7.9□□□□□ -1.14
SNX13-210ENST00000494402 HOXC13P31276 330 aa7.9□□□□□ -1.14
SNX13-210ENST00000494402 GALNSP34059 522 aa7.9□□□□□ -1.14
SNX13-210ENST00000494402 CTNNA1P35221 906 aaKnown RBP7.9□□□□□ -1.14
SNX13-210ENST00000494402 TECP42680 631 aa7.9□□□□□ -1.14
SNX13-210ENST00000494402 ADKP55263 362 aaKnown RBP7.9□□□□□ -1.14
SNX13-210ENST00000494402 GFRA1P56159 465 aa7.9□□□□□ -1.14
SNX13-210ENST00000494402 NNTQ13423 1086 aa7.9□□□□□ -1.14
SNX13-210ENST00000494402 PSMD6Q15008 389 aa7.9□□□□□ -1.14
SNX13-210ENST00000494402 SAMD5Q5TGI4 173 aa7.9□□□□□ -1.14
SNX13-210ENST00000494402 BROXQ5VW32 411 aa7.9□□□□□ -1.14
SNX13-210ENST00000494402 KIAA1614Q5VZ46 1190 aa7.9□□□□□ -1.14
SNX13-210ENST00000494402 STYK1Q6J9G0 422 aa7.9□□□□□ -1.14
SNX13-210ENST00000494402 PGBD2Q6P3X8 592 aa7.9□□□□□ -1.14
SNX13-210ENST00000494402 TMCO3Q6UWJ1 677 aa7.9□□□□□ -1.14
SNX13-210ENST00000494402 DSTYKQ6XUX3 929 aa7.9□□□□□ -1.14
SNX13-210ENST00000494402 SYDE1Q6ZW31 735 aaPredicted RBP7.9□□□□□ -1.14
SNX13-210ENST00000494402 DENND1CQ8IV53 801 aa7.9□□□□□ -1.14
SNX13-210ENST00000494402 KIAA0319LQ8IZA0 1049 aa7.9□□□□□ -1.14
SNX13-210ENST00000494402 CYP4X1Q8N118 509 aa7.9□□□□□ -1.14
SNX13-210ENST00000494402 PCYOX1LQ8NBM8 494 aa7.9□□□□□ -1.14
SNX13-210ENST00000494402 CHST14Q8NCH0 376 aa7.9□□□□□ -1.14
SNX13-210ENST00000494402 PPP1R35Q8TAP8 253 aa7.9□□□□□ -1.14
SNX13-210ENST00000494402 TRAPPC12Q8WVT3 735 aa7.9□□□□□ -1.14
SNX13-210ENST00000494402 C1GALT1C1Q96EU7 318 aa7.9□□□□□ -1.14
SNX13-210ENST00000494402 TMEM169Q96HH4 297 aa7.9□□□□□ -1.14
SNX13-210ENST00000494402 ZMAT2Q96NC0 199 aaKnown RBP7.9□□□□□ -1.14
SNX13-210ENST00000494402 PPP1R16BQ96T49 567 aa7.9□□□□□ -1.14
SNX13-210ENST00000494402 TRIT1Q9H3H1 467 aaKnown RBP7.9□□□□□ -1.14
SNX13-210ENST00000494402 CD248Q9HCU0 757 aa7.9□□□□□ -1.14
SNX13-210ENST00000494402 DMRT3Q9NQL9 472 aa7.9□□□□□ -1.14
SNX13-210ENST00000494402 WHRNQ9P202 907 aa7.9□□□□□ -1.14
SNX13-210ENST00000494402 IFT80Q9P2H3 777 aaPredicted RBP7.9□□□□□ -1.14
SNX13-210ENST00000494402 NAP1L2Q9ULW6 460 aaPredicted RBP7.9□□□□□ -1.14
SNX13-210ENST00000494402 AKT3Q9Y243 479 aa7.9□□□□□ -1.14
SNX13-210ENST00000494402 TTC24A2A3L6 582 aaPredicted RBP7.89□□□□□ -1.15
SNX13-210ENST00000494402 SYNDIG1LA6NDD5 238 aa7.89□□□□□ -1.15
SNX13-210ENST00000494402 B4E171 279 aa7.89□□□□□ -1.15
SNX13-210ENST00000494402 GDF9O60383 454 aa7.89□□□□□ -1.15
SNX13-210ENST00000494402 MGEA5O60502 916 aa7.89□□□□□ -1.15
SNX13-210ENST00000494402 CSTBP04080 98 aaKnown RBP7.89□□□□□ -1.15
SNX13-210ENST00000494402 NFKB1P19838 968 aa7.89□□□□□ -1.15
SNX13-210ENST00000494402 ITGA6P23229 1130 aa7.89□□□□□ -1.15
SNX13-210ENST00000494402 PSMA3P25788 255 aa7.89□□□□□ -1.15
SNX13-210ENST00000494402 KCNJ6P48051 423 aa7.89□□□□□ -1.15
SNX13-210ENST00000494402 GRM1Q13255 1194 aa7.89□□□□□ -1.15
SNX13-210ENST00000494402 INPP5AQ14642 412 aa7.89□□□□□ -1.15
SNX13-210ENST00000494402 SLC45A4Q5BKX6 768 aa7.89□□□□□ -1.15
SNX13-210ENST00000494402 GPATCH4Q5T3I0 446 aaKnown RBP7.89□□□□□ -1.15
SNX13-210ENST00000494402 RFX8Q6ZV50 586 aa7.89□□□□□ -1.15
SNX13-210ENST00000494402 MTDHQ86UE4 582 aaKnown RBP7.89□□□□□ -1.15
SNX13-210ENST00000494402 MAP4K3Q8IVH8 894 aa7.89□□□□□ -1.15
SNX13-210ENST00000494402 CCDC144CPQ8IYA2 1237 aa7.89□□□□□ -1.15
SNX13-210ENST00000494402 KCT2Q8NC54 265 aa7.89□□□□□ -1.15
SNX13-210ENST00000494402 GPBAR1Q8TDU6 330 aa7.89□□□□□ -1.15
SNX13-210ENST00000494402 AFAP1L1Q8TED9 768 aa7.89□□□□□ -1.15
SNX13-210ENST00000494402 DCAF4Q8WV16 495 aa7.89□□□□□ -1.15
SNX13-210ENST00000494402 SSH1Q8WYL5 1049 aa7.89□□□□□ -1.15
SNX13-210ENST00000494402 ELMO3Q96BJ8 720 aa7.89□□□□□ -1.15
SNX13-210ENST00000494402 HVCN1Q96D96 273 aa7.89□□□□□ -1.15
SNX13-210ENST00000494402 RCC1LQ96I51 464 aaKnown RBP7.89□□□□□ -1.15
SNX13-210ENST00000494402 RASSF4Q9H2L5 321 aa7.89□□□□□ -1.15
SNX13-210ENST00000494402 UBN1Q9NPG3 1134 aa7.89□□□□□ -1.15
SNX13-210ENST00000494402 PPP1R9AQ9ULJ8 1098 aa7.89□□□□□ -1.15
SNX13-210ENST00000494402 PADI4Q9UM07 663 aa7.89□□□□□ -1.15
SNX13-210ENST00000494402 L1RE1Q9UN81 338 aa7.89□□□□□ -1.15
SNX13-210ENST00000494402 ASXL2Q76L83 1435 aa7.88□□□□□ -1.15
SNX13-210ENST00000494402 SPDYE3A6NKU9 549 aa7.88□□□□□ -1.15
SNX13-210ENST00000494402 GOLGA8AA7E2F4 631 aa7.88□□□□□ -1.15
SNX13-210ENST00000494402 GOLGA8BA8MQT2 603 aa7.88□□□□□ -1.15
SNX13-210ENST00000494402 SMTNL1A8MU46 457 aa7.88□□□□□ -1.15
SNX13-210ENST00000494402 TNFRSF10AO00220 468 aa7.88□□□□□ -1.15
SNX13-210ENST00000494402 ADAMTS3O15072 1205 aa7.88□□□□□ -1.15
SNX13-210ENST00000494402 HMMRO75330 724 aa7.88□□□□□ -1.15
SNX13-210ENST00000494402 ARIH2O95376 493 aa7.88□□□□□ -1.15
SNX13-210ENST00000494402 CYP11A1P05108 521 aa7.88□□□□□ -1.15
SNX13-210ENST00000494402 CAP2P40123 477 aa7.88□□□□□ -1.15
SNX13-210ENST00000494402 PIK3CBP42338 1070 aa7.88□□□□□ -1.15
SNX13-210ENST00000494402 GPR3P46089 330 aa7.88□□□□□ -1.15
SNX13-210ENST00000494402 YARSP54577 528 aaKnown RBP7.88□□□□□ -1.15
SNX13-210ENST00000494402 ARL4CP56559 192 aa7.88□□□□□ -1.15
SNX13-210ENST00000494402 PLIN5Q00G26 463 aa7.88□□□□□ -1.15
SNX13-210ENST00000494402 PLCB4Q15147 1175 aa7.88□□□□□ -1.15
SNX13-210ENST00000494402 GJC2Q5T442 439 aaPredicted RBP7.88□□□□□ -1.15
SNX13-210ENST00000494402 LMBRD2Q68DH5 695 aaPredicted RBP7.88□□□□□ -1.15
SNX13-210ENST00000494402 ZNF787Q6DD87 383 aa7.88□□□□□ -1.15
SNX13-210ENST00000494402 USP53Q70EK8 1073 aa7.88□□□□□ -1.15
SNX13-210ENST00000494402 ZC3H7AQ8IWR0 971 aaKnown RBP7.88□□□□□ -1.15
SNX13-210ENST00000494402 PHACTR4Q8IZ21 702 aa7.88□□□□□ -1.15
SNX13-210ENST00000494402 C7orf31Q8N865 590 aa7.88□□□□□ -1.15
SNX13-210ENST00000494402 JADE3Q92613 823 aa7.88□□□□□ -1.15
SNX13-210ENST00000494402 CCDC47Q96A33 483 aaKnown RBP7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms