RNA–Protein interactions for RNA: ENST00000494323.5

PTCD3-219, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 540 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-219ENST00000494323 NFIAQ12857 509 aa6.67□□□□□ -1.34
PTCD3-219ENST00000494323 GRAPQ13588 217 aa6.67□□□□□ -1.34
PTCD3-219ENST00000494323 TBC1D10BQ4KMP7 808 aaPredicted RBP6.67□□□□□ -1.34
PTCD3-219ENST00000494323 HSP90AB3PQ58FF7 597 aa6.67□□□□□ -1.34
PTCD3-219ENST00000494323 ZBTB37Q5TC79 503 aa6.67□□□□□ -1.34
PTCD3-219ENST00000494323 GIMAP6Q6P9H5 292 aa6.67□□□□□ -1.34
PTCD3-219ENST00000494323 FAM20CQ8IXL6 584 aa6.67□□□□□ -1.34
PTCD3-219ENST00000494323 CCDC146Q8IYE0 955 aa6.67□□□□□ -1.34
PTCD3-219ENST00000494323 KCT2Q8NC54 265 aa6.67□□□□□ -1.34
PTCD3-219ENST00000494323 GRAPLQ8TC17 118 aaPredicted RBP6.67□□□□□ -1.34
PTCD3-219ENST00000494323 CELF1Q92879 486 aaKnown RBP6.67□□□□□ -1.34
PTCD3-219ENST00000494323 YIPF2Q9BWQ6 316 aa6.67□□□□□ -1.34
PTCD3-219ENST00000494323 PCMTD2Q9NV79 361 aa6.67□□□□□ -1.34
PTCD3-219ENST00000494323 POLLQ9UGP5 575 aa6.67□□□□□ -1.34
PTCD3-219ENST00000494323 ADAM30Q9UKF2 790 aa6.67□□□□□ -1.34
PTCD3-219ENST00000494323 PCDHB14Q9Y5E9 798 aa6.67□□□□□ -1.34
PTCD3-219ENST00000494323 SH3TC1Q8TE82 1336 aa6.67□□□□□ -1.34
PTCD3-219ENST00000494323 IBTKQ9P2D0 1353 aaPredicted RBP6.67□□□□□ -1.34
PTCD3-219ENST00000494323 KDM3BQ7LBC6 1761 aa6.67□□□□□ -1.34
PTCD3-219ENST00000494323 RIC1Q4ADV7 1423 aa6.67□□□□□ -1.34
PTCD3-219ENST00000494323 HMX2A2RU54 273 aa6.66□□□□□ -1.34
PTCD3-219ENST00000494323 CHL1O00533 1208 aa6.66□□□□□ -1.34
PTCD3-219ENST00000494323 HTR3BO95264 441 aa6.66□□□□□ -1.34
PTCD3-219ENST00000494323 GRK4P32298 578 aa6.66□□□□□ -1.34
PTCD3-219ENST00000494323 GPSM2P81274 684 aa6.66□□□□□ -1.34
PTCD3-219ENST00000494323 TTLL4Q14679 1199 aa6.66□□□□□ -1.34
PTCD3-219ENST00000494323 GK5Q6ZS86 529 aa6.66□□□□□ -1.34
PTCD3-219ENST00000494323 KRT26Q7Z3Y9 468 aa6.66□□□□□ -1.34
PTCD3-219ENST00000494323 CLEC10AQ8IUN9 316 aa6.66□□□□□ -1.34
PTCD3-219ENST00000494323 ZNF507Q8TCN5 953 aa6.66□□□□□ -1.34
PTCD3-219ENST00000494323 CPLX3Q8WVH0 158 aa6.66□□□□□ -1.34
PTCD3-219ENST00000494323 DCPSQ96C86 337 aaKnown RBP6.66□□□□□ -1.34
PTCD3-219ENST00000494323 HHIPL1Q96JK4 782 aa6.66□□□□□ -1.34
PTCD3-219ENST00000494323 FERD3LQ96RJ6 166 aa6.66□□□□□ -1.34
PTCD3-219ENST00000494323 DBNDD2Q9BQY9 259 aa6.66□□□□□ -1.34
PTCD3-219ENST00000494323 PIF1Q9H611 641 aa6.66□□□□□ -1.34
PTCD3-219ENST00000494323 CHPF2Q9P2E5 772 aa6.66□□□□□ -1.34
PTCD3-219ENST00000494323 LAMB4A4D0S4 1761 aa6.66□□□□□ -1.34
PTCD3-219ENST00000494323 PDE4DIPQ5VU43 2346 aa6.66□□□□□ -1.34
PTCD3-219ENST00000494323 FAM155AB1AL88 458 aaPredicted RBP6.65□□□□□ -1.34
PTCD3-219ENST00000494323 ADM5C9JUS6 153 aa6.65□□□□□ -1.34
PTCD3-219ENST00000494323 CA12O43570 354 aa6.65□□□□□ -1.34
PTCD3-219ENST00000494323 SMARCA5O60264 1052 aaPredicted RBP6.65□□□□□ -1.34
PTCD3-219ENST00000494323 STK10O94804 968 aaKnown RBP6.65□□□□□ -1.34
PTCD3-219ENST00000494323 TGFB1P01137 390 aa6.65□□□□□ -1.34
PTCD3-219ENST00000494323 SSBP05455 408 aaKnown RBP eCLIP6.65□□□□□ -1.34
PTCD3-219ENST00000494323 PGRP06401 933 aa6.65□□□□□ -1.34
PTCD3-219ENST00000494323 PLCG1P19174 1290 aa6.65□□□□□ -1.34
PTCD3-219ENST00000494323 SSTR4P31391 388 aa6.65□□□□□ -1.34
PTCD3-219ENST00000494323 RPS8P62241 208 aaKnown RBP6.65□□□□□ -1.34
PTCD3-219ENST00000494323 KIF23Q02241 960 aaPredicted RBP6.65□□□□□ -1.34
PTCD3-219ENST00000494323 CLCQ05315 142 aa6.65□□□□□ -1.34
PTCD3-219ENST00000494323 NOGQ13253 232 aa6.65□□□□□ -1.34
PTCD3-219ENST00000494323 SERINC3Q13530 473 aa6.65□□□□□ -1.34
PTCD3-219ENST00000494323 SF3B3Q15393 1217 aaKnown RBP6.65□□□□□ -1.34
PTCD3-219ENST00000494323 LRRFIP1Q32MZ4 808 aaKnown RBP6.65□□□□□ -1.34
PTCD3-219ENST00000494323 CCDC144BQ3MJ40 725 aa6.65□□□□□ -1.34
PTCD3-219ENST00000494323 TMEM201Q5SNT2 666 aa6.65□□□□□ -1.34
PTCD3-219ENST00000494323 RNF43Q68DV7 783 aa6.65□□□□□ -1.34
PTCD3-219ENST00000494323 RGMBQ6NW40 437 aa6.65□□□□□ -1.34
PTCD3-219ENST00000494323 BEND4Q6ZU67 534 aa6.65□□□□□ -1.34
PTCD3-219ENST00000494323 C2orf69Q8N8R5 385 aa6.65□□□□□ -1.34
PTCD3-219ENST00000494323 PLBD2Q8NHP8 589 aa6.65□□□□□ -1.34
PTCD3-219ENST00000494323 DPF2Q92785 391 aa6.65□□□□□ -1.34
PTCD3-219ENST00000494323 FAM83CQ9BQN1 747 aa6.65□□□□□ -1.34
PTCD3-219ENST00000494323 SRRTQ9BXP5 876 aaKnown RBP6.65□□□□□ -1.34
PTCD3-219ENST00000494323 GBA2Q9HCG7 927 aaPredicted RBP6.65□□□□□ -1.34
PTCD3-219ENST00000494323 FAM105AQ9NUU6 356 aa6.65□□□□□ -1.34
PTCD3-219ENST00000494323 BABAM1Q9NWV8 329 aa6.65□□□□□ -1.34
PTCD3-219ENST00000494323 RNF186Q9NXI6 227 aa6.65□□□□□ -1.34
PTCD3-219ENST00000494323 SCAF8Q9UPN6 1271 aaKnown RBP6.65□□□□□ -1.34
PTCD3-219ENST00000494323 ASTN2O75129 1339 aaPredicted RBP6.65□□□□□ -1.35
PTCD3-219ENST00000494323 ELL2O00472 640 aaPredicted RBP6.64□□□□□ -1.35
PTCD3-219ENST00000494323 IRS4O14654 1257 aaPredicted RBP6.64□□□□□ -1.35
PTCD3-219ENST00000494323 ECE2O60344 883 aa6.64□□□□□ -1.35
PTCD3-219ENST00000494323 RNGTTO60942 597 aaKnown RBP6.64□□□□□ -1.35
PTCD3-219ENST00000494323 NTF4P34130 210 aa6.64□□□□□ -1.35
PTCD3-219ENST00000494323 LCE3BQ5TA77 95 aa6.64□□□□□ -1.35
PTCD3-219ENST00000494323 HID1Q8IV36 788 aa6.64□□□□□ -1.35
PTCD3-219ENST00000494323 SMYD4Q8IYR2 804 aaPredicted RBP6.64□□□□□ -1.35
PTCD3-219ENST00000494323 TBC1D16Q8TBP0 767 aa6.64□□□□□ -1.35
PTCD3-219ENST00000494323 ISL2Q96A47 359 aa6.64□□□□□ -1.35
PTCD3-219ENST00000494323 CRBNQ96SW2 442 aa6.64□□□□□ -1.35
PTCD3-219ENST00000494323 ISCA1Q9BUE6 129 aa6.64□□□□□ -1.35
PTCD3-219ENST00000494323 ACSS3Q9H6R3 686 aa6.64□□□□□ -1.35
PTCD3-219ENST00000494323 SSU72Q9NP77 194 aaKnown RBP6.64□□□□□ -1.35
PTCD3-219ENST00000494323 REV1Q9UBZ9 1251 aa6.64□□□□□ -1.35
PTCD3-219ENST00000494323 PCOLCE2Q9UKZ9 415 aa6.64□□□□□ -1.35
PTCD3-219ENST00000494323 PPT2Q9UMR5 302 aa6.64□□□□□ -1.35
PTCD3-219ENST00000494323 CORINQ9Y5Q5 1042 aa6.64□□□□□ -1.35
PTCD3-219ENST00000494323 RTL9Q8NET4 1388 aa6.64□□□□□ -1.35
PTCD3-219ENST00000494323 LAMB2P55268 1798 aa6.64□□□□□ -1.35
PTCD3-219ENST00000494323 WTIPA6NIX2 430 aaPredicted RBP6.63□□□□□ -1.35
PTCD3-219ENST00000494323 COBLO75128 1261 aa6.63□□□□□ -1.35
PTCD3-219ENST00000494323 VIL1P09327 827 aaKnown RBP6.63□□□□□ -1.35
PTCD3-219ENST00000494323 RAB6AP20340 208 aa6.63□□□□□ -1.35
PTCD3-219ENST00000494323 MAP4P27816 1152 aaKnown RBP6.63□□□□□ -1.35
PTCD3-219ENST00000494323 ETFBP38117 255 aa6.63□□□□□ -1.35
PTCD3-219ENST00000494323 GRIK1P39086 918 aa6.63□□□□□ -1.35
PTCD3-219ENST00000494323 CD97P48960 835 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms