RNA–Protein interactions for RNA: ENST00000494019.5

RFC2-211, Transcript of replication factor C subunit 2, humanhuman

TSL 3

Gene RFC2, Length 730 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC2-211ENST00000494019 KCNV1Q6PIU1 500 aa11.53□□□□□ -0.56
RFC2-211ENST00000494019 KRT25Q7Z3Z0 450 aa11.53□□□□□ -0.56
RFC2-211ENST00000494019 HSCBQ8IWL3 235 aa11.53□□□□□ -0.56
RFC2-211ENST00000494019 OXER1Q8TDS5 423 aa11.53□□□□□ -0.56
RFC2-211ENST00000494019 GPRASP2Q96D09 838 aa11.53□□□□□ -0.56
RFC2-211ENST00000494019 C11orf49Q9H6J7 331 aa11.53□□□□□ -0.56
RFC2-211ENST00000494019 DDX41Q9UJV9 622 aaKnown RBP11.53□□□□□ -0.56
RFC2-211ENST00000494019 SMC3Q9UQE7 1217 aa11.53□□□□□ -0.56
RFC2-211ENST00000494019 Q9Y3F1 56 aa11.53□□□□□ -0.56
RFC2-211ENST00000494019 UBIAD1Q9Y5Z9 338 aa11.53□□□□□ -0.56
RFC2-211ENST00000494019 KAT6AQ92794 2004 aa11.53□□□□□ -0.56
RFC2-211ENST00000494019 GGPS1O95749 300 aa11.52□□□□□ -0.57
RFC2-211ENST00000494019 CST5P28325 142 aaPredicted RBP11.52□□□□□ -0.57
RFC2-211ENST00000494019 ICAM3P32942 547 aa11.52□□□□□ -0.57
RFC2-211ENST00000494019 CPT1AP50416 773 aa11.52□□□□□ -0.57
RFC2-211ENST00000494019 ARHGAP1Q07960 439 aa11.52□□□□□ -0.57
RFC2-211ENST00000494019 SEMA3FQ13275 785 aa11.52□□□□□ -0.57
RFC2-211ENST00000494019 NR5A1Q13285 461 aa11.52□□□□□ -0.57
RFC2-211ENST00000494019 CUL4AQ13619 759 aa11.52□□□□□ -0.57
RFC2-211ENST00000494019 GNASQ5JWF2 1037 aa11.52□□□□□ -0.57
RFC2-211ENST00000494019 PIK3AP1Q6ZUJ8 805 aa11.52□□□□□ -0.57
RFC2-211ENST00000494019 NECAB2Q7Z6G3 386 aa11.52□□□□□ -0.57
RFC2-211ENST00000494019 UBE2Q1Q7Z7E8 422 aa11.52□□□□□ -0.57
RFC2-211ENST00000494019 DHX37Q8IY37 1157 aaKnown RBP11.52□□□□□ -0.57
RFC2-211ENST00000494019 DIS3L2Q8IYB7 885 aaKnown RBP11.52□□□□□ -0.57
RFC2-211ENST00000494019 PCSK9Q8NBP7 692 aaKnown RBP11.52□□□□□ -0.57
RFC2-211ENST00000494019 KLHDC9Q8NEP7 349 aa11.52□□□□□ -0.57
RFC2-211ENST00000494019 TBCKQ8TEA7 893 aa11.52□□□□□ -0.57
RFC2-211ENST00000494019 CRYGNQ8WXF5 182 aa11.52□□□□□ -0.57
RFC2-211ENST00000494019 SNX21Q969T3 373 aa11.52□□□□□ -0.57
RFC2-211ENST00000494019 CDHR1Q96JP9 859 aa11.52□□□□□ -0.57
RFC2-211ENST00000494019 MXRA8Q9BRK3 442 aa11.52□□□□□ -0.57
RFC2-211ENST00000494019 JADE2Q9NQC1 790 aa11.52□□□□□ -0.57
RFC2-211ENST00000494019 PKD2L1Q9P0L9 805 aa11.52□□□□□ -0.57
RFC2-211ENST00000494019 MKI67P46013 3256 aaKnown RBP11.52□□□□□ -0.57
RFC2-211ENST00000494019 A0A1W2PQ45 241 aaPredicted RBP11.51□□□□□ -0.57
RFC2-211ENST00000494019 A0A1W2PQY0 241 aa11.51□□□□□ -0.57
RFC2-211ENST00000494019 MOXD2PA6NHM9 499 aa11.51□□□□□ -0.57
RFC2-211ENST00000494019 SPATA31C2B4DYI2 1134 aa11.51□□□□□ -0.57
RFC2-211ENST00000494019 FAM86B1E9PN63 330 aa11.51□□□□□ -0.57
RFC2-211ENST00000494019 CTAGE5O15320 804 aa11.51□□□□□ -0.57
RFC2-211ENST00000494019 ASGR1P07306 291 aa11.51□□□□□ -0.57
RFC2-211ENST00000494019 CYP3A4P08684 503 aa11.51□□□□□ -0.57
RFC2-211ENST00000494019 FAM86B2P0C5J1 330 aa11.51□□□□□ -0.57
RFC2-211ENST00000494019 TGFB3P10600 412 aa11.51□□□□□ -0.57
RFC2-211ENST00000494019 NKX3-2P78367 333 aa11.51□□□□□ -0.57
RFC2-211ENST00000494019 SETQ01105 290 aaPredicted RBP11.51□□□□□ -0.57
RFC2-211ENST00000494019 SP2Q02086 613 aa11.51□□□□□ -0.57
RFC2-211ENST00000494019 SAFBQ15424 915 aaKnown RBP eCLIP11.51□□□□□ -0.57
RFC2-211ENST00000494019 KCNA10Q16322 511 aa11.51□□□□□ -0.57
RFC2-211ENST00000494019 INF2Q27J81 1249 aa11.51□□□□□ -0.57
RFC2-211ENST00000494019 CEP55Q53EZ4 464 aa11.51□□□□□ -0.57
RFC2-211ENST00000494019 BRDTQ58F21 947 aaPredicted RBP11.51□□□□□ -0.57
RFC2-211ENST00000494019 CYP2W1Q8TAV3 490 aa11.51□□□□□ -0.57
RFC2-211ENST00000494019 FERMT2Q96AC1 680 aa11.51□□□□□ -0.57
RFC2-211ENST00000494019 TSEN34Q9BSV6 310 aaKnown RBP11.51□□□□□ -0.57
RFC2-211ENST00000494019 SENP6Q9GZR1 1112 aaPredicted RBP11.51□□□□□ -0.57
RFC2-211ENST00000494019 MLXIPQ9HAP2 919 aa11.51□□□□□ -0.57
RFC2-211ENST00000494019 PHF24Q9UPV7 400 aa11.51□□□□□ -0.57
RFC2-211ENST00000494019 TRIP12Q14669 1992 aaPredicted RBP11.5□□□□□ -0.57
RFC2-211ENST00000494019 FAM205CA6NFA0 338 aa11.5□□□□□ -0.57
RFC2-211ENST00000494019 BTBD18B2RXH4 712 aa11.5□□□□□ -0.57
RFC2-211ENST00000494019 ZEB2O60315 1214 aa11.5□□□□□ -0.57
RFC2-211ENST00000494019 MMP3P08254 477 aa11.5□□□□□ -0.57
RFC2-211ENST00000494019 MYL3P08590 195 aa11.5□□□□□ -0.57
RFC2-211ENST00000494019 COL6A1P12109 1028 aa11.5□□□□□ -0.57
RFC2-211ENST00000494019 RGS19P49795 217 aa11.5□□□□□ -0.57
RFC2-211ENST00000494019 ACLYP53396 1101 aa11.5□□□□□ -0.57
RFC2-211ENST00000494019 SP4Q02446 784 aa11.5□□□□□ -0.57
RFC2-211ENST00000494019 LAMC2Q13753 1193 aa11.5□□□□□ -0.57
RFC2-211ENST00000494019 GNL2Q13823 731 aaKnown RBP11.5□□□□□ -0.57
RFC2-211ENST00000494019 NEDD9Q14511 834 aa11.5□□□□□ -0.57
RFC2-211ENST00000494019 PRR16Q569H4 304 aa11.5□□□□□ -0.57
RFC2-211ENST00000494019 CELF3Q5SZQ8 465 aaKnown RBP11.5□□□□□ -0.57
RFC2-211ENST00000494019 CCSAPQ6IQ19 270 aaPredicted RBP11.5□□□□□ -0.57
RFC2-211ENST00000494019 CYFIP1Q7L576 1253 aa11.5□□□□□ -0.57
RFC2-211ENST00000494019 NIPA1Q7RTP0 329 aa11.5□□□□□ -0.57
RFC2-211ENST00000494019 NEK8Q86SG6 692 aa11.5□□□□□ -0.57
RFC2-211ENST00000494019 PLA2G4DQ86XP0 818 aa11.5□□□□□ -0.57
RFC2-211ENST00000494019 FBXO18Q8NFZ0 1043 aa11.5□□□□□ -0.57
RFC2-211ENST00000494019 AFG1LQ8WV93 481 aa11.5□□□□□ -0.57
RFC2-211ENST00000494019 TNFRSF25Q93038 417 aa11.5□□□□□ -0.57
RFC2-211ENST00000494019 EMID1Q96A84 441 aaPredicted RBP11.5□□□□□ -0.57
RFC2-211ENST00000494019 SPATA33Q96N06 139 aa11.5□□□□□ -0.57
RFC2-211ENST00000494019 KCNH7Q9NS40 1196 aa11.5□□□□□ -0.57
RFC2-211ENST00000494019 FOXD4L1Q9NU39 408 aa11.5□□□□□ -0.57
RFC2-211ENST00000494019 LTBP2Q14767 1821 aa11.5□□□□□ -0.57
RFC2-211ENST00000494019 IGLV3-22A0A075B6J6 115 aa11.49□□□□□ -0.57
RFC2-211ENST00000494019 A6NJR5 290 aa11.49□□□□□ -0.57
RFC2-211ENST00000494019 MEIS1O00470 390 aa11.49□□□□□ -0.57
RFC2-211ENST00000494019 NOP56O00567 594 aaKnown RBP11.49□□□□□ -0.57
RFC2-211ENST00000494019 MAFGO15525 162 aa11.49□□□□□ -0.57
RFC2-211ENST00000494019 ATP9AO75110 1047 aa11.49□□□□□ -0.57
RFC2-211ENST00000494019 TDP2O95551 362 aa11.49□□□□□ -0.57
RFC2-211ENST00000494019 ARP10275 920 aa11.49□□□□□ -0.57
RFC2-211ENST00000494019 KCNA2P16389 499 aa11.49□□□□□ -0.57
RFC2-211ENST00000494019 CIITAP33076 1130 aa11.49□□□□□ -0.57
RFC2-211ENST00000494019 USP11P51784 963 aa11.49□□□□□ -0.57
RFC2-211ENST00000494019 ATN1P54259 1190 aaPredicted RBP11.49□□□□□ -0.57
RFC2-211ENST00000494019 LETM2Q2VYF4 491 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms