RNA–Protein interactions for RNA: ENST00000494016.1

CPSF7-213, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 2

Gene CPSF7, Length 656 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-213ENST00000494016 PPARAQ07869 468 aa6.96□□□□□ -1.3
CPSF7-213ENST00000494016 TMEM67Q5HYA8 995 aa6.96□□□□□ -1.3
CPSF7-213ENST00000494016 PEAR1Q5VY43 1037 aaPredicted RBP6.96□□□□□ -1.3
CPSF7-213ENST00000494016 PRR5LQ6MZQ0 368 aa6.96□□□□□ -1.3
CPSF7-213ENST00000494016 C15orf52Q6ZUT6 534 aaKnown RBP6.96□□□□□ -1.3
CPSF7-213ENST00000494016 VPS37DQ86XT2 251 aa6.96□□□□□ -1.3
CPSF7-213ENST00000494016 WFDC8Q8IUA0 241 aa6.96□□□□□ -1.3
CPSF7-213ENST00000494016 ANKRD13AQ8IZ07 590 aa6.96□□□□□ -1.3
CPSF7-213ENST00000494016 RNF214Q8ND24 703 aa6.96□□□□□ -1.3
CPSF7-213ENST00000494016 ENGASEQ8NFI3 743 aa6.96□□□□□ -1.3
CPSF7-213ENST00000494016 ZNF526Q8TF50 670 aaPredicted RBP6.96□□□□□ -1.3
CPSF7-213ENST00000494016 SDR42E1Q8WUS8 393 aa6.96□□□□□ -1.3
CPSF7-213ENST00000494016 ZNF396Q96N95 335 aaPredicted RBP6.96□□□□□ -1.3
CPSF7-213ENST00000494016 AIFM3Q96NN9 605 aa6.96□□□□□ -1.3
CPSF7-213ENST00000494016 CSRNP1Q96S65 589 aa6.96□□□□□ -1.3
CPSF7-213ENST00000494016 MTA3Q9BTC8 594 aa6.96□□□□□ -1.3
CPSF7-213ENST00000494016 BRIP1Q9BX63 1249 aa6.96□□□□□ -1.3
CPSF7-213ENST00000494016 FTOQ9C0B1 505 aaKnown RBP eCLIP6.96□□□□□ -1.3
CPSF7-213ENST00000494016 CLSTN2Q9H4D0 955 aa6.96□□□□□ -1.3
CPSF7-213ENST00000494016 LEMD3Q9Y2U8 911 aa6.96□□□□□ -1.3
CPSF7-213ENST00000494016 NID2Q14112 1375 aa6.95□□□□□ -1.3
CPSF7-213ENST00000494016 CYP2D7A0A087X1C5 515 aa6.95□□□□□ -1.3
CPSF7-213ENST00000494016 KLRG2A4D1S0 409 aaPredicted RBP6.95□□□□□ -1.3
CPSF7-213ENST00000494016 GOLGA8AA7E2F4 631 aa6.95□□□□□ -1.3
CPSF7-213ENST00000494016 MINDY4BA8MYZ0 360 aa6.95□□□□□ -1.3
CPSF7-213ENST00000494016 RANBP6O60518 1105 aaKnown RBP6.95□□□□□ -1.3
CPSF7-213ENST00000494016 SERPINB2P05120 415 aa6.95□□□□□ -1.3
CPSF7-213ENST00000494016 YBX3P16989 372 aaKnown RBP eCLIP6.95□□□□□ -1.3
CPSF7-213ENST00000494016 RXRAP19793 462 aa6.95□□□□□ -1.3
CPSF7-213ENST00000494016 CEBPZQ03701 1054 aaKnown RBP6.95□□□□□ -1.3
CPSF7-213ENST00000494016 SNW1Q13573 536 aaKnown RBP6.95□□□□□ -1.3
CPSF7-213ENST00000494016 GRAPQ13588 217 aa6.95□□□□□ -1.3
CPSF7-213ENST00000494016 SEC23AQ15436 765 aa6.95□□□□□ -1.3
CPSF7-213ENST00000494016 CAMK4Q16566 473 aa6.95□□□□□ -1.3
CPSF7-213ENST00000494016 CRY2Q49AN0 593 aa6.95□□□□□ -1.3
CPSF7-213ENST00000494016 HS1BP3Q53T59 392 aa6.95□□□□□ -1.3
CPSF7-213ENST00000494016 KRT40Q6A162 431 aa6.95□□□□□ -1.3
CPSF7-213ENST00000494016 GDF6Q6KF10 455 aaPredicted RBP6.95□□□□□ -1.3
CPSF7-213ENST00000494016 CTR9Q6PD62 1173 aa6.95□□□□□ -1.3
CPSF7-213ENST00000494016 NBPF11Q86T75 865 aa6.95□□□□□ -1.3
CPSF7-213ENST00000494016 CERS3Q8IU89 383 aa6.95□□□□□ -1.3
CPSF7-213ENST00000494016 CCAR1Q8IX12 1150 aaKnown RBP6.95□□□□□ -1.3
CPSF7-213ENST00000494016 DMRTC2Q8IXT2 367 aaPredicted RBP6.95□□□□□ -1.3
CPSF7-213ENST00000494016 IL22RA1Q8N6P7 574 aa6.95□□□□□ -1.3
CPSF7-213ENST00000494016 TMEM102Q8N9M5 508 aaPredicted RBP6.95□□□□□ -1.3
CPSF7-213ENST00000494016 TDRD7Q8NHU6 1098 aaKnown RBP6.95□□□□□ -1.3
CPSF7-213ENST00000494016 GRAPLQ8TC17 118 aaPredicted RBP6.95□□□□□ -1.3
CPSF7-213ENST00000494016 C8orf76Q96K31 380 aa6.95□□□□□ -1.3
CPSF7-213ENST00000494016 POP1Q99575 1024 aaKnown RBP6.95□□□□□ -1.3
CPSF7-213ENST00000494016 OSMRQ99650 979 aa6.95□□□□□ -1.3
CPSF7-213ENST00000494016 ZKSCAN3Q9BRR0 538 aa6.95□□□□□ -1.3
CPSF7-213ENST00000494016 ALG1Q9BT22 464 aa6.95□□□□□ -1.3
CPSF7-213ENST00000494016 MYL10Q9BUA6 226 aa6.95□□□□□ -1.3
CPSF7-213ENST00000494016 GOLPH3LQ9H4A5 285 aa6.95□□□□□ -1.3
CPSF7-213ENST00000494016 LATS2Q9NRM7 1088 aa6.95□□□□□ -1.3
CPSF7-213ENST00000494016 DDX19AQ9NUU7 478 aaKnown RBP6.95□□□□□ -1.3
CPSF7-213ENST00000494016 DACT1Q9NYF0 836 aa6.95□□□□□ -1.3
CPSF7-213ENST00000494016 PCDHA7Q9UN72 937 aa6.95□□□□□ -1.3
CPSF7-213ENST00000494016 CLIC4Q9Y696 253 aa6.95□□□□□ -1.3
CPSF7-213ENST00000494016 BRCA1P38398 1863 aaKnown RBP6.95□□□□□ -1.3
CPSF7-213ENST00000494016 BAZ2AQ9UIF9 1905 aaKnown RBP6.95□□□□□ -1.3
CPSF7-213ENST00000494016 MYH2Q9UKX2 1941 aa6.95□□□□□ -1.3
CPSF7-213ENST00000494016 ECM29Q5VYK3 1845 aa6.94□□□□□ -1.3
CPSF7-213ENST00000494016 CCDC88AQ3V6T2 1871 aa6.94□□□□□ -1.3
CPSF7-213ENST00000494016 A0A0A0MRY4 1105 aa6.94□□□□□ -1.3
CPSF7-213ENST00000494016 GOLGA6L4A6NEF3 574 aa6.94□□□□□ -1.3
CPSF7-213ENST00000494016 CCDC69A6NI79 296 aa6.94□□□□□ -1.3
CPSF7-213ENST00000494016 UBE2Q2LH0YL09 131 aa6.94□□□□□ -1.3
CPSF7-213ENST00000494016 PDE2AO00408 941 aaPredicted RBP6.94□□□□□ -1.3
CPSF7-213ENST00000494016 CPLX1O14810 134 aa6.94□□□□□ -1.3
CPSF7-213ENST00000494016 AP5Z1O43299 807 aa6.94□□□□□ -1.3
CPSF7-213ENST00000494016 TRPA1O75762 1119 aa6.94□□□□□ -1.3
CPSF7-213ENST00000494016 IFNAR1P17181 557 aa6.94□□□□□ -1.3
CPSF7-213ENST00000494016 HOXA10P31260 410 aaPredicted RBP6.94□□□□□ -1.3
CPSF7-213ENST00000494016 IARSP41252 1262 aaKnown RBP6.94□□□□□ -1.3
CPSF7-213ENST00000494016 GPSM2P81274 684 aa6.94□□□□□ -1.3
CPSF7-213ENST00000494016 KIF23Q02241 960 aaPredicted RBP6.94□□□□□ -1.3
CPSF7-213ENST00000494016 FMR1Q06787 632 aaKnown RBP eCLIP6.94□□□□□ -1.3
CPSF7-213ENST00000494016 DDR1Q08345 913 aa6.94□□□□□ -1.3
CPSF7-213ENST00000494016 CHAF1AQ13111 956 aaPredicted RBP6.94□□□□□ -1.3
CPSF7-213ENST00000494016 SBK1Q52WX2 424 aa6.94□□□□□ -1.3
CPSF7-213ENST00000494016 RRP12Q5JTH9 1297 aaKnown RBP6.94□□□□□ -1.3
CPSF7-213ENST00000494016 LCE3BQ5TA77 95 aa6.94□□□□□ -1.3
CPSF7-213ENST00000494016 TMED8Q6PL24 325 aaPredicted RBP6.94□□□□□ -1.3
CPSF7-213ENST00000494016 ADAMTSL4Q6UY14 1074 aa6.94□□□□□ -1.3
CPSF7-213ENST00000494016 NFXL1Q6ZNB6 911 aa6.94□□□□□ -1.3
CPSF7-213ENST00000494016 BRAPQ7Z569 592 aa6.94□□□□□ -1.3
CPSF7-213ENST00000494016 CCDC144CPQ8IYA2 1237 aa6.94□□□□□ -1.3
CPSF7-213ENST00000494016 STK11IPQ8N1F8 1099 aa6.94□□□□□ -1.3
CPSF7-213ENST00000494016 TMTC2Q8N394 836 aa6.94□□□□□ -1.3
CPSF7-213ENST00000494016 CRACR2BQ8N4Y2 399 aaPredicted RBP6.94□□□□□ -1.3
CPSF7-213ENST00000494016 DTWD1Q8N5C7 304 aa6.94□□□□□ -1.3
CPSF7-213ENST00000494016 CNBD1Q8NA66 436 aa6.94□□□□□ -1.3
CPSF7-213ENST00000494016 LINC00301Q8NCQ3 95 aa6.94□□□□□ -1.3
CPSF7-213ENST00000494016 ANP32BQ92688 251 aaKnown RBP6.94□□□□□ -1.3
CPSF7-213ENST00000494016 PHKBQ93100 1093 aa6.94□□□□□ -1.3
CPSF7-213ENST00000494016 NXPE3Q969Y0 559 aa6.94□□□□□ -1.3
CPSF7-213ENST00000494016 CCDC74AQ96AQ1 378 aa6.94□□□□□ -1.3
CPSF7-213ENST00000494016 HHIPQ96QV1 700 aa6.94□□□□□ -1.3
CPSF7-213ENST00000494016 ADAM19Q9H013 955 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms