RNA–Protein interactions for RNA: ENST00000493949.1

PDLIM1-205, Transcript of PDZ and LIM domain 1, humanhuman

TSL 3

Gene PDLIM1, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-205ENST00000493949 FAM212AQ96EL1 285 aa12.08□□□□□ -0.48
PDLIM1-205ENST00000493949 SRRTQ9BXP5 876 aaKnown RBP12.08□□□□□ -0.48
PDLIM1-205ENST00000493949 AGXT2Q9BYV1 514 aa12.08□□□□□ -0.48
PDLIM1-205ENST00000493949 ABHD16BQ9H3Z7 469 aa12.08□□□□□ -0.48
PDLIM1-205ENST00000493949 ZHX1Q9UKY1 873 aaPredicted RBP12.08□□□□□ -0.48
PDLIM1-205ENST00000493949 GRIN2DO15399 1336 aa12.08□□□□□ -0.48
PDLIM1-205ENST00000493949 DCHS1Q96JQ0 3298 aa12.07□□□□□ -0.48
PDLIM1-205ENST00000493949 A0A1W2PQ27 194 aa12.07□□□□□ -0.48
PDLIM1-205ENST00000493949 A0A1W2PQ64 194 aa12.07□□□□□ -0.48
PDLIM1-205ENST00000493949 A0A1W2PQD8 194 aa12.07□□□□□ -0.48
PDLIM1-205ENST00000493949 GRXCR2A6NFK2 248 aa12.07□□□□□ -0.48
PDLIM1-205ENST00000493949 H3BQV1 296 aa12.07□□□□□ -0.48
PDLIM1-205ENST00000493949 WDR46O15213 610 aaKnown RBP12.07□□□□□ -0.48
PDLIM1-205ENST00000493949 PFKFB2O60825 505 aa12.07□□□□□ -0.48
PDLIM1-205ENST00000493949 KINO60870 393 aaKnown RBP12.07□□□□□ -0.48
PDLIM1-205ENST00000493949 TPM1P09493 284 aa12.07□□□□□ -0.48
PDLIM1-205ENST00000493949 STAT3P40763 770 aa12.07□□□□□ -0.48
PDLIM1-205ENST00000493949 PLCD1P51178 756 aa12.07□□□□□ -0.48
PDLIM1-205ENST00000493949 FAM160A1Q05DH4 1040 aa12.07□□□□□ -0.48
PDLIM1-205ENST00000493949 CCDC144BQ3MJ40 725 aa12.07□□□□□ -0.48
PDLIM1-205ENST00000493949 TTC39AQ5SRH9 613 aa12.07□□□□□ -0.48
PDLIM1-205ENST00000493949 RIF1Q5UIP0 2472 aaKnown RBP12.07□□□□□ -0.48
PDLIM1-205ENST00000493949 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.07□□□□□ -0.48
PDLIM1-205ENST00000493949 SPC24Q8NBT2 197 aa12.07□□□□□ -0.48
PDLIM1-205ENST00000493949 REPS2Q8NFH8 660 aa12.07□□□□□ -0.48
PDLIM1-205ENST00000493949 MFSD14AQ96MC6 490 aa12.07□□□□□ -0.48
PDLIM1-205ENST00000493949 NEK1Q96PY6 1258 aa12.07□□□□□ -0.48
PDLIM1-205ENST00000493949 FSD1Q9BTV5 496 aa12.07□□□□□ -0.48
PDLIM1-205ENST00000493949 FAM53CQ9NYF3 392 aa12.07□□□□□ -0.48
PDLIM1-205ENST00000493949 TLR7Q9NYK1 1049 aaKnown RBP12.07□□□□□ -0.48
PDLIM1-205ENST00000493949 TMX2Q9Y320 296 aa12.07□□□□□ -0.48
PDLIM1-205ENST00000493949 WDR87Q6ZQQ6 2873 aa12.06□□□□□ -0.48
PDLIM1-205ENST00000493949 BECN2A8MW95 431 aa12.06□□□□□ -0.48
PDLIM1-205ENST00000493949 ATP8B1O43520 1251 aa12.06□□□□□ -0.48
PDLIM1-205ENST00000493949 B4GALT4O60513 344 aa12.06□□□□□ -0.48
PDLIM1-205ENST00000493949 IL9P15248 144 aa12.06□□□□□ -0.48
PDLIM1-205ENST00000493949 CYP7A1P22680 504 aa12.06□□□□□ -0.48
PDLIM1-205ENST00000493949 USP5P45974 858 aa12.06□□□□□ -0.48
PDLIM1-205ENST00000493949 CBX1P83916 185 aa12.06□□□□□ -0.48
PDLIM1-205ENST00000493949 ITGA7Q13683 1181 aa12.06□□□□□ -0.48
PDLIM1-205ENST00000493949 LRRFIP1Q32MZ4 808 aaKnown RBP12.06□□□□□ -0.48
PDLIM1-205ENST00000493949 PUS10Q3MIT2 529 aaKnown RBP12.06□□□□□ -0.48
PDLIM1-205ENST00000493949 PTCRAQ6ISU1 281 aaPredicted RBP12.06□□□□□ -0.48
PDLIM1-205ENST00000493949 HFE2Q6ZVN8 426 aa12.06□□□□□ -0.48
PDLIM1-205ENST00000493949 FCHSD1Q86WN1 690 aa12.06□□□□□ -0.48
PDLIM1-205ENST00000493949 SIAH1Q8IUQ4 282 aa12.06□□□□□ -0.48
PDLIM1-205ENST00000493949 HERC6Q8IVU3 1022 aa12.06□□□□□ -0.48
PDLIM1-205ENST00000493949 SCLYQ96I15 445 aa12.06□□□□□ -0.48
PDLIM1-205ENST00000493949 TRPV6Q9H1D0 765 aa12.06□□□□□ -0.48
PDLIM1-205ENST00000493949 VCPKMTQ9H867 229 aa12.06□□□□□ -0.48
PDLIM1-205ENST00000493949 TRIP12Q14669 1992 aaPredicted RBP12.06□□□□□ -0.48
PDLIM1-205ENST00000493949 KMT2EQ8IZD2 1858 aa12.06□□□□□ -0.48
PDLIM1-205ENST00000493949 FAM186AA6NE01 2351 aa12.05□□□□□ -0.48
PDLIM1-205ENST00000493949 KIF28PB7ZC32 967 aa12.05□□□□□ -0.48
PDLIM1-205ENST00000493949 VWA5AO00534 786 aa12.05□□□□□ -0.48
PDLIM1-205ENST00000493949 SLU7O95391 586 aaKnown RBP12.05□□□□□ -0.48
PDLIM1-205ENST00000493949 ACTN1P12814 892 aa12.05□□□□□ -0.48
PDLIM1-205ENST00000493949 TNNI3KQ59H18 835 aa12.05□□□□□ -0.48
PDLIM1-205ENST00000493949 TMEM179Q6ZVK1 233 aa12.05□□□□□ -0.48
PDLIM1-205ENST00000493949 C16orf45Q96MC5 204 aaPredicted RBP12.05□□□□□ -0.48
PDLIM1-205ENST00000493949 DSCC1Q9BVC3 393 aa12.05□□□□□ -0.48
PDLIM1-205ENST00000493949 KATNBL1Q9H079 304 aa12.05□□□□□ -0.48
PDLIM1-205ENST00000493949 L2HGDHQ9H9P8 463 aa12.05□□□□□ -0.48
PDLIM1-205ENST00000493949 GPR108Q9NPR9 543 aa12.05□□□□□ -0.48
PDLIM1-205ENST00000493949 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.05□□□□□ -0.48
PDLIM1-205ENST00000493949 PRKAG3Q9UGI9 489 aa12.05□□□□□ -0.48
PDLIM1-205ENST00000493949 FPGT-TNNI3KV9GXZ4 949 aa12.05□□□□□ -0.48
PDLIM1-205ENST00000493949 ASTN1O14525 1302 aa12.05□□□□□ -0.48
PDLIM1-205ENST00000493949 WDR19Q8NEZ3 1342 aa12.05□□□□□ -0.48
PDLIM1-205ENST00000493949 CACNA1BQ00975 2339 aa12.04□□□□□ -0.48
PDLIM1-205ENST00000493949 NR1I2O75469 434 aa12.04□□□□□ -0.48
PDLIM1-205ENST00000493949 YEATS4O95619 227 aa12.04□□□□□ -0.48
PDLIM1-205ENST00000493949 KCNA5P22460 613 aa12.04□□□□□ -0.48
PDLIM1-205ENST00000493949 RFC2P35250 354 aa12.04□□□□□ -0.48
PDLIM1-205ENST00000493949 PTPN5P54829 565 aa12.04□□□□□ -0.48
PDLIM1-205ENST00000493949 TMED8Q6PL24 325 aaPredicted RBP12.04□□□□□ -0.48
PDLIM1-205ENST00000493949 CXCL17Q6UXB2 119 aa12.04□□□□□ -0.48
PDLIM1-205ENST00000493949 SPRED2Q7Z698 418 aa12.04□□□□□ -0.48
PDLIM1-205ENST00000493949 SPICE1Q8N0Z3 855 aa12.04□□□□□ -0.48
PDLIM1-205ENST00000493949 C17orf53Q8N3J3 647 aaPredicted RBP12.04□□□□□ -0.48
PDLIM1-205ENST00000493949 NECAB1Q8N987 351 aa12.04□□□□□ -0.48
PDLIM1-205ENST00000493949 PRSS33Q8NF86 280 aa12.04□□□□□ -0.48
PDLIM1-205ENST00000493949 NEK9Q8TD19 979 aa12.04□□□□□ -0.48
PDLIM1-205ENST00000493949 CACTINQ8WUQ7 758 aaKnown RBP12.04□□□□□ -0.48
PDLIM1-205ENST00000493949 ANKS1AQ92625 1134 aa12.04□□□□□ -0.48
PDLIM1-205ENST00000493949 BRF1Q92994 677 aa12.04□□□□□ -0.48
PDLIM1-205ENST00000493949 ZNF274Q96GC6 653 aaPredicted RBP12.04□□□□□ -0.48
PDLIM1-205ENST00000493949 PGBD1Q96JS3 809 aa12.04□□□□□ -0.48
PDLIM1-205ENST00000493949 ZNF512BQ96KM6 892 aaPredicted RBP12.04□□□□□ -0.48
PDLIM1-205ENST00000493949 PRRX2Q99811 253 aa12.04□□□□□ -0.48
PDLIM1-205ENST00000493949 TSPYL1Q9H0U9 437 aa12.04□□□□□ -0.48
PDLIM1-205ENST00000493949 SH2D4AQ9H788 454 aa12.04□□□□□ -0.48
PDLIM1-205ENST00000493949 ARHGEF10LQ9HCE6 1279 aa12.04□□□□□ -0.48
PDLIM1-205ENST00000493949 HELLSQ9NRZ9 838 aa12.04□□□□□ -0.48
PDLIM1-205ENST00000493949 PPP1R9AQ9ULJ8 1098 aa12.04□□□□□ -0.48
PDLIM1-205ENST00000493949 ZNF536O15090 1300 aa12.04□□□□□ -0.48
PDLIM1-205ENST00000493949 SCN10AQ9Y5Y9 1956 aa12.03□□□□□ -0.48
PDLIM1-205ENST00000493949 A0A0D9SFI3 127 aa12.03□□□□□ -0.48
PDLIM1-205ENST00000493949 GOLGA6L9A6NEM1 432 aa12.03□□□□□ -0.48
PDLIM1-205ENST00000493949 IDH1O75874 414 aaKnown RBP12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms