RNA–Protein interactions for RNA: ENST00000493864.1

TRA2B-216, Transcript of transformer 2 beta homolog, humanhuman

TSL 2

Gene TRA2B, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-216ENST00000493864 NOS3P29474 1203 aa7.86□□□□□ -1.15
TRA2B-216ENST00000493864 IARSP41252 1262 aaKnown RBP7.86□□□□□ -1.15
TRA2B-216ENST00000493864 RPS26P62854 115 aaKnown RBP7.86□□□□□ -1.15
TRA2B-216ENST00000493864 HDLBPQ00341 1268 aaKnown RBP7.86□□□□□ -1.15
TRA2B-216ENST00000493864 SLC9C2Q5TAH2 1124 aa7.86□□□□□ -1.15
TRA2B-216ENST00000493864 TTLL5Q6EMB2 1281 aa7.86□□□□□ -1.15
TRA2B-216ENST00000493864 CWC27Q6UX04 472 aaKnown RBP7.86□□□□□ -1.15
TRA2B-216ENST00000493864 AGMOQ6ZNB7 445 aa7.86□□□□□ -1.15
TRA2B-216ENST00000493864 ERMP1Q7Z2K6 904 aa7.86□□□□□ -1.15
TRA2B-216ENST00000493864 PHC3Q8NDX5 983 aa7.86□□□□□ -1.15
TRA2B-216ENST00000493864 SEC62Q99442 399 aaKnown RBP7.86□□□□□ -1.15
TRA2B-216ENST00000493864 RSRP1Q9BUV0 290 aa7.86□□□□□ -1.15
TRA2B-216ENST00000493864 TMPRSS13Q9BYE2 586 aa7.86□□□□□ -1.15
TRA2B-216ENST00000493864 VPS33BQ9H267 617 aa7.86□□□□□ -1.15
TRA2B-216ENST00000493864 IL25Q9H293 177 aa7.86□□□□□ -1.15
TRA2B-216ENST00000493864 TAOK3Q9H2K8 898 aa7.86□□□□□ -1.15
TRA2B-216ENST00000493864 DIAPH3Q9NSV4 1193 aa7.86□□□□□ -1.15
TRA2B-216ENST00000493864 RAI14Q9P0K7 980 aa7.86□□□□□ -1.15
TRA2B-216ENST00000493864 LTBP3Q9NS15 1303 aa7.85□□□□□ -1.15
TRA2B-216ENST00000493864 A0A0D9SFI3 127 aa7.85□□□□□ -1.15
TRA2B-216ENST00000493864 TCRBV5S4A2TA0A5A2 114 aa7.85□□□□□ -1.15
TRA2B-216ENST00000493864 HIP1O00291 1037 aa7.85□□□□□ -1.15
TRA2B-216ENST00000493864 ZNF862O60290 1169 aa7.85□□□□□ -1.15
TRA2B-216ENST00000493864 RAD17O75943 681 aa7.85□□□□□ -1.15
TRA2B-216ENST00000493864 TCF3P15923 654 aa7.85□□□□□ -1.15
TRA2B-216ENST00000493864 PDE6AP16499 860 aa7.85□□□□□ -1.15
TRA2B-216ENST00000493864 TFE3P19532 575 aaPredicted RBP7.85□□□□□ -1.15
TRA2B-216ENST00000493864 CYP7A1P22680 504 aa7.85□□□□□ -1.15
TRA2B-216ENST00000493864 PRDX5P30044 214 aa7.85□□□□□ -1.15
TRA2B-216ENST00000493864 ADD2P35612 726 aa7.85□□□□□ -1.15
TRA2B-216ENST00000493864 MECOMQ03112 1051 aa7.85□□□□□ -1.15
TRA2B-216ENST00000493864 MAP3K12Q12852 859 aa7.85□□□□□ -1.15
TRA2B-216ENST00000493864 PWP1Q13610 501 aa7.85□□□□□ -1.15
TRA2B-216ENST00000493864 ZMYM1Q5SVZ6 1142 aa7.85□□□□□ -1.15
TRA2B-216ENST00000493864 DACT2Q5SW24 774 aa7.85□□□□□ -1.15
TRA2B-216ENST00000493864 SPTY2D1Q68D10 685 aaPredicted RBP7.85□□□□□ -1.15
TRA2B-216ENST00000493864 CASC1Q6TDU7 716 aa7.85□□□□□ -1.15
TRA2B-216ENST00000493864 TICAM2Q86XR7 235 aa7.85□□□□□ -1.15
TRA2B-216ENST00000493864 CERS5Q8N5B7 392 aa7.85□□□□□ -1.15
TRA2B-216ENST00000493864 MAGEB6Q8N7X4 407 aa7.85□□□□□ -1.15
TRA2B-216ENST00000493864 GPBAR1Q8TDU6 330 aa7.85□□□□□ -1.15
TRA2B-216ENST00000493864 ZNF384Q8TF68 577 aa7.85□□□□□ -1.15
TRA2B-216ENST00000493864 OSBP2Q969R2 916 aa7.85□□□□□ -1.15
TRA2B-216ENST00000493864 WDR89Q96FK6 387 aaPredicted RBP7.85□□□□□ -1.15
TRA2B-216ENST00000493864 TMEM74Q96NL1 305 aa7.85□□□□□ -1.15
TRA2B-216ENST00000493864 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.85□□□□□ -1.15
TRA2B-216ENST00000493864 KRT82Q9NSB4 513 aa7.85□□□□□ -1.15
TRA2B-216ENST00000493864 ZNRF3Q9ULT6 936 aa7.85□□□□□ -1.15
TRA2B-216ENST00000493864 PCDHB5Q9Y5E4 795 aa7.85□□□□□ -1.15
TRA2B-216ENST00000493864 CEP350Q5VT06 3117 aa7.85□□□□□ -1.15
TRA2B-216ENST00000493864 AK9Q5TCS8 1911 aa7.85□□□□□ -1.15
TRA2B-216ENST00000493864 ZNF532Q9HCE3 1301 aa7.84□□□□□ -1.15
TRA2B-216ENST00000493864 SALL1Q9NSC2 1324 aa7.84□□□□□ -1.15
TRA2B-216ENST00000493864 COL4A5P29400 1685 aa7.84□□□□□ -1.15
TRA2B-216ENST00000493864 MEGF11A6BM72 1044 aa7.84□□□□□ -1.15
TRA2B-216ENST00000493864 M0R2C6 588 aa7.84□□□□□ -1.15
TRA2B-216ENST00000493864 SGSM2O43147 1006 aa7.84□□□□□ -1.15
TRA2B-216ENST00000493864 AOC2O75106 756 aa7.84□□□□□ -1.15
TRA2B-216ENST00000493864 ZFYP08048 801 aaPredicted RBP7.84□□□□□ -1.15
TRA2B-216ENST00000493864 SEPT6Q14141 434 aa7.84□□□□□ -1.15
TRA2B-216ENST00000493864 LRRFIP1Q32MZ4 808 aaKnown RBP7.84□□□□□ -1.15
TRA2B-216ENST00000493864 ZNF394Q53GI3 561 aa7.84□□□□□ -1.15
TRA2B-216ENST00000493864 MFSD14BQ5SR56 506 aa7.84□□□□□ -1.15
TRA2B-216ENST00000493864 STRIP1Q5VSL9 837 aa7.84□□□□□ -1.15
TRA2B-216ENST00000493864 ZSCAN25Q6NSZ9 544 aa7.84□□□□□ -1.15
TRA2B-216ENST00000493864 FDX2Q6P4F2 183 aa7.84□□□□□ -1.15
TRA2B-216ENST00000493864 CCDC129Q6ZRS4 1044 aa7.84□□□□□ -1.15
TRA2B-216ENST00000493864 METTL16Q86W50 562 aaKnown RBP7.84□□□□□ -1.15
TRA2B-216ENST00000493864 NIM1KQ8IY84 436 aa7.84□□□□□ -1.15
TRA2B-216ENST00000493864 C12orf50Q8NA57 414 aaPredicted RBP7.84□□□□□ -1.15
TRA2B-216ENST00000493864 TBC1D22AQ8WUA7 517 aa7.84□□□□□ -1.15
TRA2B-216ENST00000493864 RUFY2Q8WXA3 655 aa7.84□□□□□ -1.15
TRA2B-216ENST00000493864 JDP2Q8WYK2 163 aa7.84□□□□□ -1.15
TRA2B-216ENST00000493864 NSUN4Q96CB9 384 aaKnown RBP7.84□□□□□ -1.15
TRA2B-216ENST00000493864 WDR18Q9BV38 432 aa7.84□□□□□ -1.15
TRA2B-216ENST00000493864 CYP4F12Q9HCS2 524 aa7.84□□□□□ -1.15
TRA2B-216ENST00000493864 RNF181Q9P0P0 153 aa7.84□□□□□ -1.15
TRA2B-216ENST00000493864 SCN9AQ15858 1988 aa7.84□□□□□ -1.15
TRA2B-216ENST00000493864 F8W031 263 aaPredicted RBP7.83□□□□□ -1.16
TRA2B-216ENST00000493864 PSMD14O00487 310 aa7.83□□□□□ -1.16
TRA2B-216ENST00000493864 PF4P02776 101 aa7.83□□□□□ -1.16
TRA2B-216ENST00000493864 VIL1P09327 827 aaKnown RBP7.83□□□□□ -1.16
TRA2B-216ENST00000493864 DYNLL1P63167 89 aaKnown RBP7.83□□□□□ -1.16
TRA2B-216ENST00000493864 FAM160A1Q05DH4 1040 aa7.83□□□□□ -1.16
TRA2B-216ENST00000493864 CXCL9Q07325 125 aa7.83□□□□□ -1.16
TRA2B-216ENST00000493864 UBE3CQ15386 1083 aa7.83□□□□□ -1.16
TRA2B-216ENST00000493864 PLA2G4EQ3MJ16 856 aa7.83□□□□□ -1.16
TRA2B-216ENST00000493864 MCMDC2Q4G0Z9 681 aa7.83□□□□□ -1.16
TRA2B-216ENST00000493864 ANKRD34AQ69YU3 496 aa7.83□□□□□ -1.16
TRA2B-216ENST00000493864 NAA16Q6N069 864 aaPredicted RBP7.83□□□□□ -1.16
TRA2B-216ENST00000493864 ADGRA1Q86SQ6 560 aa7.83□□□□□ -1.16
TRA2B-216ENST00000493864 ZNF589Q86UQ0 364 aaPredicted RBP7.83□□□□□ -1.16
TRA2B-216ENST00000493864 USP48Q86UV5 1035 aa7.83□□□□□ -1.16
TRA2B-216ENST00000493864 NT5DC4Q86YG4 428 aa7.83□□□□□ -1.16
TRA2B-216ENST00000493864 ZGPATQ8N5A5 531 aaKnown RBP7.83□□□□□ -1.16
TRA2B-216ENST00000493864 APPBP2Q92624 585 aa7.83□□□□□ -1.16
TRA2B-216ENST00000493864 PUS7LQ9H0K6 701 aaKnown RBP7.83□□□□□ -1.16
TRA2B-216ENST00000493864 MIR1-1HGQ9H1L0 117 aa7.83□□□□□ -1.16
TRA2B-216ENST00000493864 HELLSQ9NRZ9 838 aa7.83□□□□□ -1.16
TRA2B-216ENST00000493864 PCDHGB7Q9Y5F8 929 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms