RNA–Protein interactions for RNA: ENST00000493815.5

PDLIM7-208, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,686 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-208ENST00000493815 ATP2B1P20020 1258 aa20.35■□□□□ 0.85
PDLIM7-208ENST00000493815 MTMR1Q13613 665 aa20.35■□□□□ 0.85
PDLIM7-208ENST00000493815 DUSP28Q4G0W2 176 aa20.35■□□□□ 0.85
PDLIM7-208ENST00000493815 PRR16Q569H4 304 aa20.35■□□□□ 0.85
PDLIM7-208ENST00000493815 XPNPEP3Q9NQH7 507 aa20.35■□□□□ 0.85
PDLIM7-208ENST00000493815 DDX41Q9UJV9 622 aaKnown RBP20.35■□□□□ 0.85
PDLIM7-208ENST00000493815 SPATA31C2B4DYI2 1134 aa20.34■□□□□ 0.85
PDLIM7-208ENST00000493815 DYNC1LI2O43237 492 aaPredicted RBP20.34■□□□□ 0.85
PDLIM7-208ENST00000493815 SGPL1O95470 568 aa20.34■□□□□ 0.85
PDLIM7-208ENST00000493815 TFRCP02786 760 aaKnown RBP20.34■□□□□ 0.85
PDLIM7-208ENST00000493815 USP11P51784 963 aa20.34■□□□□ 0.85
PDLIM7-208ENST00000493815 SOX10P56693 466 aa20.34■□□□□ 0.85
PDLIM7-208ENST00000493815 NEK8Q86SG6 692 aa20.34■□□□□ 0.85
PDLIM7-208ENST00000493815 TLK2Q86UE8 772 aa20.34■□□□□ 0.85
PDLIM7-208ENST00000493815 NLRX1Q86UT6 975 aa20.34■□□□□ 0.85
PDLIM7-208ENST00000493815 NOSTRINQ8IVI9 506 aa20.34■□□□□ 0.85
PDLIM7-208ENST00000493815 KCNH7Q9NS40 1196 aa20.34■□□□□ 0.85
PDLIM7-208ENST00000493815 KIAA0100Q14667 2235 aaKnown RBP20.34■□□□□ 0.85
PDLIM7-208ENST00000493815 SYNRGQ9UMZ2 1314 aa20.33■□□□□ 0.85
PDLIM7-208ENST00000493815 IGLV3-22A0A075B6J6 115 aa20.33■□□□□ 0.85
PDLIM7-208ENST00000493815 MYADML2A6NDP7 307 aa20.33■□□□□ 0.85
PDLIM7-208ENST00000493815 MEIS1O00470 390 aa20.33■□□□□ 0.85
PDLIM7-208ENST00000493815 FIBPO43427 364 aa20.33■□□□□ 0.85
PDLIM7-208ENST00000493815 MSCO60682 206 aa20.33■□□□□ 0.85
PDLIM7-208ENST00000493815 ATP9AO75110 1047 aa20.33■□□□□ 0.85
PDLIM7-208ENST00000493815 DUSP11O75319 330 aaKnown RBP20.33■□□□□ 0.85
PDLIM7-208ENST00000493815 EN2P19622 333 aaPredicted RBP20.33■□□□□ 0.85
PDLIM7-208ENST00000493815 PDCP20941 246 aa20.33■□□□□ 0.85
PDLIM7-208ENST00000493815 UBA1P22314 1058 aaKnown RBP20.33■□□□□ 0.85
PDLIM7-208ENST00000493815 U2AF2P26368 475 aaKnown RBP eCLIP20.33■□□□□ 0.852e-9■■■□□ 16.8
PDLIM7-208ENST00000493815 GJA8P48165 433 aa20.33■□□□□ 0.85
PDLIM7-208ENST00000493815 FERMT3Q86UX7 667 aa20.33■□□□□ 0.85
PDLIM7-208ENST00000493815 PLA2G4DQ86XP0 818 aa20.33■□□□□ 0.85
PDLIM7-208ENST00000493815 GPRASP2Q96D09 838 aa20.33■□□□□ 0.85
PDLIM7-208ENST00000493815 CCNT1O60563 726 aaKnown RBP20.32■□□□□ 0.84
PDLIM7-208ENST00000493815 ICAM3P32942 547 aa20.32■□□□□ 0.84
PDLIM7-208ENST00000493815 CIITAP33076 1130 aa20.32■□□□□ 0.84
PDLIM7-208ENST00000493815 LENG9Q96B70 501 aa20.32■□□□□ 0.84
PDLIM7-208ENST00000493815 KIAA1217Q5T5P2 1943 aa20.32■□□□□ 0.84
PDLIM7-208ENST00000493815 ANP32AP39687 249 aaKnown RBP20.32■□□□□ 0.84
PDLIM7-208ENST00000493815 BEX3Q00994 111 aa20.32■□□□□ 0.84
PDLIM7-208ENST00000493815 OR6J1Q8NGC5 347 aa20.32■□□□□ 0.84
PDLIM7-208ENST00000493815 GJA10Q969M2 543 aa20.32■□□□□ 0.84
PDLIM7-208ENST00000493815 CRISPLD2Q9H0B8 497 aa20.32■□□□□ 0.84
PDLIM7-208ENST00000493815 TELO2Q9Y4R8 837 aa20.32■□□□□ 0.84
PDLIM7-208ENST00000493815 STX6O43752 255 aa20.31■□□□□ 0.84
PDLIM7-208ENST00000493815 SLC37A4O43826 429 aa20.31■□□□□ 0.84
PDLIM7-208ENST00000493815 GGPS1O95749 300 aa20.31■□□□□ 0.84
PDLIM7-208ENST00000493815 C6orf222P0C671 652 aaPredicted RBP20.31■□□□□ 0.84
PDLIM7-208ENST00000493815 PKP1Q13835 747 aa20.31■□□□□ 0.84
PDLIM7-208ENST00000493815 NBR1Q14596 966 aa20.31■□□□□ 0.84
PDLIM7-208ENST00000493815 FOXD4L5Q5VV16 416 aaPredicted RBP20.31■□□□□ 0.84
PDLIM7-208ENST00000493815 FOXD4L4Q8WXT5 416 aaPredicted RBP20.31■□□□□ 0.84
PDLIM7-208ENST00000493815 AP5M1Q9H0R1 490 aa20.31■□□□□ 0.84
PDLIM7-208ENST00000493815 OGDHLQ9ULD0 1010 aa20.31■□□□□ 0.84
PDLIM7-208ENST00000493815 MTMR6Q9Y217 621 aa20.31■□□□□ 0.84
PDLIM7-208ENST00000493815 RBM19Q9Y4C8 960 aaKnown RBP20.31■□□□□ 0.84
PDLIM7-208ENST00000493815 DNAH12Q6ZR08 3092 aa20.3■□□□□ 0.84
PDLIM7-208ENST00000493815 ADAMTS4O75173 837 aa20.3■□□□□ 0.84
PDLIM7-208ENST00000493815 TGFB3P10600 412 aa20.3■□□□□ 0.84
PDLIM7-208ENST00000493815 KCNA2P16389 499 aa20.3■□□□□ 0.84
PDLIM7-208ENST00000493815 SP4Q02446 784 aa20.3■□□□□ 0.84
PDLIM7-208ENST00000493815 ARHGAP1Q07960 439 aa20.3■□□□□ 0.84
PDLIM7-208ENST00000493815 KCNV1Q6PIU1 500 aa20.3■□□□□ 0.84
PDLIM7-208ENST00000493815 CYFIP1Q7L576 1253 aa20.3■□□□□ 0.84
PDLIM7-208ENST00000493815 DHX37Q8IY37 1157 aaKnown RBP20.3■□□□□ 0.84
PDLIM7-208ENST00000493815 AGO4Q9HCK5 861 aaKnown RBP20.3■□□□□ 0.84
PDLIM7-208ENST00000493815 DDX25Q9UHL0 483 aaKnown RBP20.3■□□□□ 0.84
PDLIM7-208ENST00000493815 CYP3A7-CYP3A51PA0A087WV96 503 aa20.29■□□□□ 0.84
PDLIM7-208ENST00000493815 CTAGE5O15320 804 aa20.29■□□□□ 0.84
PDLIM7-208ENST00000493815 GH1P01241 217 aa20.29■□□□□ 0.84
PDLIM7-208ENST00000493815 CYP3A7P24462 503 aa20.29■□□□□ 0.84
PDLIM7-208ENST00000493815 GJA9P57773 515 aa20.29■□□□□ 0.84
PDLIM7-208ENST00000493815 ITGB3BPQ13352 177 aaPredicted RBP20.29■□□□□ 0.84
PDLIM7-208ENST00000493815 LRRC41Q15345 812 aa20.29■□□□□ 0.84
PDLIM7-208ENST00000493815 CELF3Q5SZQ8 465 aaKnown RBP20.29■□□□□ 0.84
PDLIM7-208ENST00000493815 NIPA1Q7RTP0 329 aa20.29■□□□□ 0.84
PDLIM7-208ENST00000493815 CDHR1Q96JP9 859 aa20.29■□□□□ 0.84
PDLIM7-208ENST00000493815 NKRFO15226 690 aaKnown RBP eCLIP20.29■□□□□ 0.84
PDLIM7-208ENST00000493815 TOB1P50616 345 aaPredicted RBP20.29■□□□□ 0.84
PDLIM7-208ENST00000493815 GNASQ5JWF2 1037 aa20.29■□□□□ 0.84
PDLIM7-208ENST00000493815 MYSM1Q5VVJ2 828 aa20.29■□□□□ 0.84
PDLIM7-208ENST00000493815 AFG1LQ8WV93 481 aa20.29■□□□□ 0.84
PDLIM7-208ENST00000493815 ZNF577Q9BSK1 485 aa20.29■□□□□ 0.84
PDLIM7-208ENST00000493815 UPF3AQ9H1J1 476 aaKnown RBP20.29■□□□□ 0.84
PDLIM7-208ENST00000493815 MLXIPQ9HAP2 919 aa20.29■□□□□ 0.84
PDLIM7-208ENST00000493815 DDX39AO00148 427 aaKnown RBP20.28■□□□□ 0.84
PDLIM7-208ENST00000493815 IPO5O00410 1097 aaKnown RBP20.28■□□□□ 0.84
PDLIM7-208ENST00000493815 MSH4O15457 936 aa20.28■□□□□ 0.84
PDLIM7-208ENST00000493815 MAFGO15525 162 aa20.28■□□□□ 0.84
PDLIM7-208ENST00000493815 MCM7P33993 719 aa20.28■□□□□ 0.84
PDLIM7-208ENST00000493815 SETQ01105 290 aaPredicted RBP20.28■□□□□ 0.84
PDLIM7-208ENST00000493815 ZNF174Q15697 407 aa20.28■□□□□ 0.84
PDLIM7-208ENST00000493815 FSCN1Q16658 493 aaKnown RBP20.28■□□□□ 0.84
PDLIM7-208ENST00000493815 HSDL1Q3SXM5 330 aa20.28■□□□□ 0.84
PDLIM7-208ENST00000493815 Q4G0T1 1027 aa20.28■□□□□ 0.84
PDLIM7-208ENST00000493815 PPP4R3AQ6IN85 833 aa20.28■□□□□ 0.84
PDLIM7-208ENST00000493815 POTEDQ86YR6 584 aa20.28■□□□□ 0.84
PDLIM7-208ENST00000493815 DIS3LQ8TF46 1054 aaKnown RBP20.28■□□□□ 0.84
PDLIM7-208ENST00000493815 SPATA33Q96N06 139 aa20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms