RNA–Protein interactions for RNA: ENST00000493792.1

TRAPPC12-222, Transcript of trafficking protein particle complex 12, human

TSL 2

Gene TRAPPC12, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRAPPC12-222	ENST00000493792	TMEM63B	Q5T3F8	832 aa		11.95	□□□□□ -0.5
TRAPPC12-222	ENST00000493792	TRIM22	Q8IYM9	498 aa		11.95	□□□□□ -0.5
TRAPPC12-222	ENST00000493792	PCSK9	Q8NBP7	692 aa	Known RBP	11.95	□□□□□ -0.5
TRAPPC12-222	ENST00000493792	OR6J1	Q8NGC5	347 aa		11.95	□□□□□ -0.5
TRAPPC12-222	ENST00000493792	IL31RA	Q8NI17	732 aa		11.95	□□□□□ -0.5
TRAPPC12-222	ENST00000493792	SCFD2	Q8WU76	684 aa		11.95	□□□□□ -0.5
TRAPPC12-222	ENST00000493792	ZNF274	Q96GC6	653 aa	Predicted RBP	11.95	□□□□□ -0.5
TRAPPC12-222	ENST00000493792	UHRF1	Q96T88	793 aa	Predicted RBP	11.95	□□□□□ -0.5
TRAPPC12-222	ENST00000493792	THEG	Q9P2T0	379 aa		11.95	□□□□□ -0.5
TRAPPC12-222	ENST00000493792	TBX21	Q9UL17	535 aa		11.95	□□□□□ -0.5
TRAPPC12-222	ENST00000493792	XIRP2	A4UGR9	3374 aa		11.95	□□□□□ -0.5
TRAPPC12-222	ENST00000493792	NID2	Q14112	1375 aa		11.94	□□□□□ -0.5
TRAPPC12-222	ENST00000493792	SMCO2	A6NFE2	343 aa		11.94	□□□□□ -0.5
TRAPPC12-222	ENST00000493792	hCG_1984214	I3L0E3	225 aa		11.94	□□□□□ -0.5
TRAPPC12-222	ENST00000493792	PRPF3	O43395	683 aa	Known RBP	11.94	□□□□□ -0.5
TRAPPC12-222	ENST00000493792	ZEB2	O60315	1214 aa		11.94	□□□□□ -0.5
TRAPPC12-222	ENST00000493792	EIF3J	O75822	258 aa	Known RBP	11.94	□□□□□ -0.5
TRAPPC12-222	ENST00000493792	IFNAR1	P17181	557 aa		11.94	□□□□□ -0.5
TRAPPC12-222	ENST00000493792	CST5	P28325	142 aa	Predicted RBP	11.94	□□□□□ -0.5
TRAPPC12-222	ENST00000493792	CDK7	P50613	346 aa		11.94	□□□□□ -0.5
TRAPPC12-222	ENST00000493792	EVC	P57679	992 aa		11.94	□□□□□ -0.5
TRAPPC12-222	ENST00000493792	GJA9	P57773	515 aa		11.94	□□□□□ -0.5
TRAPPC12-222	ENST00000493792	GHRHR	Q02643	423 aa		11.94	□□□□□ -0.5
TRAPPC12-222	ENST00000493792	PFKFB3	Q16875	520 aa	Predicted RBP	11.94	□□□□□ -0.5
TRAPPC12-222	ENST00000493792	MFSD5	Q6N075	450 aa		11.94	□□□□□ -0.5
TRAPPC12-222	ENST00000493792	PPP1R18	Q6NYC8	613 aa		11.94	□□□□□ -0.5
TRAPPC12-222	ENST00000493792	ZNF713	Q8N859	430 aa	Predicted RBP	11.94	□□□□□ -0.5
TRAPPC12-222	ENST00000493792	COPS5	Q92905	334 aa		11.94	□□□□□ -0.5
TRAPPC12-222	ENST00000493792	GAS2L1	Q99501	681 aa	Predicted RBP	11.94	□□□□□ -0.5
TRAPPC12-222	ENST00000493792	C22orf23	Q9BZE7	217 aa		11.94	□□□□□ -0.5
TRAPPC12-222	ENST00000493792	UPF3A	Q9H1J1	476 aa	Known RBP	11.94	□□□□□ -0.5
TRAPPC12-222	ENST00000493792	EHMT1	Q9H9B1	1298 aa		11.94	□□□□□ -0.5
TRAPPC12-222	ENST00000493792	BARHL2	Q9NY43	387 aa		11.94	□□□□□ -0.5
TRAPPC12-222	ENST00000493792	GNE	Q9Y223	722 aa	Known RBP	11.94	□□□□□ -0.5
TRAPPC12-222	ENST00000493792	MRVI1	Q9Y6F6	885 aa		11.94	□□□□□ -0.5
TRAPPC12-222	ENST00000493792	RBM47	A0AV96	593 aa	Known RBP	11.93	□□□□□ -0.5
TRAPPC12-222	ENST00000493792	STXBP3	O00186	592 aa		11.93	□□□□□ -0.5
TRAPPC12-222	ENST00000493792	MEIS2	O14770	477 aa		11.93	□□□□□ -0.5
TRAPPC12-222	ENST00000493792	NKRF	O15226	690 aa	Known RBP eCLIP	11.93	□□□□□ -0.5
TRAPPC12-222	ENST00000493792	SORBS3	O60504	671 aa		11.93	□□□□□ -0.5
TRAPPC12-222	ENST00000493792	ASGR1	P07306	291 aa		11.93	□□□□□ -0.5
TRAPPC12-222	ENST00000493792	MYL3	P08590	195 aa		11.93	□□□□□ -0.5
TRAPPC12-222	ENST00000493792	NKX3-2	P78367	333 aa		11.93	□□□□□ -0.5
TRAPPC12-222	ENST00000493792	CCDC85B	Q15834	202 aa	Predicted RBP	11.93	□□□□□ -0.5
TRAPPC12-222	ENST00000493792	FSCN1	Q16658	493 aa	Known RBP	11.93	□□□□□ -0.5
TRAPPC12-222	ENST00000493792	LY6K	Q17RY6	165 aa		11.93	□□□□□ -0.5
TRAPPC12-222	ENST00000493792	BRDT	Q58F21	947 aa	Predicted RBP	11.93	□□□□□ -0.5
TRAPPC12-222	ENST00000493792	TYW1B	Q6NUM6	668 aa		11.93	□□□□□ -0.5
TRAPPC12-222	ENST00000493792	GLT1D1	Q96MS3	346 aa		11.93	□□□□□ -0.5
TRAPPC12-222	ENST00000493792	NECAB3	Q96P71	396 aa	Predicted RBP	11.93	□□□□□ -0.5
TRAPPC12-222	ENST00000493792	RNF26	Q9BY78	433 aa	Predicted RBP	11.93	□□□□□ -0.5
TRAPPC12-222	ENST00000493792	STARD7	Q9NQZ5	370 aa		11.93	□□□□□ -0.5
TRAPPC12-222	ENST00000493792	RTEL1	Q9NZ71	1219 aa		11.93	□□□□□ -0.5
TRAPPC12-222	ENST00000493792	TPCN1	Q9ULQ1	816 aa		11.93	□□□□□ -0.5
TRAPPC12-222	ENST00000493792	PCDHA6	Q9UN73	950 aa		11.93	□□□□□ -0.5
TRAPPC12-222	ENST00000493792	PCDHA8	Q9Y5H6	950 aa		11.93	□□□□□ -0.5
TRAPPC12-222	ENST00000493792	MYO9B	Q13459	2157 aa		11.93	□□□□□ -0.5
TRAPPC12-222	ENST00000493792	CHD7	Q9P2D1	2997 aa		11.93	□□□□□ -0.5
TRAPPC12-222	ENST00000493792	BDP1	A6H8Y1	2624 aa		11.92	□□□□□ -0.5
TRAPPC12-222	ENST00000493792	ELP1	O95163	1332 aa		11.92	□□□□□ -0.5
TRAPPC12-222	ENST00000493792	DCDC2C	A8MYV0	355 aa		11.92	□□□□□ -0.5
TRAPPC12-222	ENST00000493792	PIK3CD	O00329	1044 aa		11.92	□□□□□ -0.5
TRAPPC12-222	ENST00000493792	CDKL5	O76039	1030 aa		11.92	□□□□□ -0.5
TRAPPC12-222	ENST00000493792	ARIH2	O95376	493 aa		11.92	□□□□□ -0.5
TRAPPC12-222	ENST00000493792	GH1	P01241	217 aa		11.92	□□□□□ -0.5
TRAPPC12-222	ENST00000493792	CHMP4BP1	P59074	171 aa		11.92	□□□□□ -0.5
TRAPPC12-222	ENST00000493792	SCRN1	Q12765	414 aa		11.92	□□□□□ -0.5
TRAPPC12-222	ENST00000493792	NTRK3	Q16288	839 aa		11.92	□□□□□ -0.5
TRAPPC12-222	ENST00000493792	GNPTAB	Q3T906	1256 aa		11.92	□□□□□ -0.5
TRAPPC12-222	ENST00000493792	CXCL17	Q6UXB2	119 aa		11.92	□□□□□ -0.5
TRAPPC12-222	ENST00000493792	ZNF365	Q70YC5	407 aa		11.92	□□□□□ -0.5
TRAPPC12-222	ENST00000493792	VSIG10L	Q86VR7	867 aa		11.92	□□□□□ -0.5
TRAPPC12-222	ENST00000493792	CCDC12	Q8WUD4	166 aa	Predicted RBP	11.92	□□□□□ -0.5
TRAPPC12-222	ENST00000493792	PGBD1	Q96JS3	809 aa		11.92	□□□□□ -0.5
TRAPPC12-222	ENST00000493792	C6orf50	Q9HD87	102 aa		11.92	□□□□□ -0.5
TRAPPC12-222	ENST00000493792	RIC8A	Q9NPQ8	531 aa		11.92	□□□□□ -0.5
TRAPPC12-222	ENST00000493792	VPS54	Q9P1Q0	977 aa		11.92	□□□□□ -0.5
TRAPPC12-222	ENST00000493792		Q9Y3F1	56 aa		11.92	□□□□□ -0.5
TRAPPC12-222	ENST00000493792	ARIH1	Q9Y4X5	557 aa	Predicted RBP	11.92	□□□□□ -0.5
TRAPPC12-222	ENST00000493792	CTAGE5	O15320	804 aa		11.91	□□□□□ -0.5
TRAPPC12-222	ENST00000493792	DTNB	O60941	627 aa		11.91	□□□□□ -0.5
TRAPPC12-222	ENST00000493792	ACR	P10323	421 aa		11.91	□□□□□ -0.5
TRAPPC12-222	ENST00000493792	CSF2RA	P15509	400 aa		11.91	□□□□□ -0.5
TRAPPC12-222	ENST00000493792	CPT1A	P50416	773 aa		11.91	□□□□□ -0.5
TRAPPC12-222	ENST00000493792	NLRP5	P59047	1200 aa		11.91	□□□□□ -0.5
TRAPPC12-222	ENST00000493792	PKN1	Q16512	942 aa		11.91	□□□□□ -0.5
TRAPPC12-222	ENST00000493792	JAKMIP3	Q5VZ66	844 aa		11.91	□□□□□ -0.5
TRAPPC12-222	ENST00000493792	NLRX1	Q86UT6	975 aa		11.91	□□□□□ -0.5
TRAPPC12-222	ENST00000493792	DHX37	Q8IY37	1157 aa	Known RBP	11.91	□□□□□ -0.5
TRAPPC12-222	ENST00000493792	NECAB1	Q8N987	351 aa		11.91	□□□□□ -0.5
TRAPPC12-222	ENST00000493792	CCDC148	Q8NFR7	591 aa		11.91	□□□□□ -0.5
TRAPPC12-222	ENST00000493792	C1QTNF1	Q9BXJ1	281 aa		11.91	□□□□□ -0.5
TRAPPC12-222	ENST00000493792	GLT8D2	Q9H1C3	349 aa		11.91	□□□□□ -0.5
TRAPPC12-222	ENST00000493792	ALDH8A1	Q9H2A2	487 aa	Predicted RBP	11.91	□□□□□ -0.5
TRAPPC12-222	ENST00000493792	TMEM260	Q9NX78	707 aa		11.91	□□□□□ -0.5
TRAPPC12-222	ENST00000493792	CXXC1	Q9P0U4	656 aa	Predicted RBP	11.91	□□□□□ -0.5
TRAPPC12-222	ENST00000493792	KIAA1217	Q5T5P2	1943 aa		11.91	□□□□□ -0.5
TRAPPC12-222	ENST00000493792	PFKFB2	O60825	505 aa		11.9	□□□□□ -0.5
TRAPPC12-222	ENST00000493792	DEXI	O95424	95 aa		11.9	□□□□□ -0.5
TRAPPC12-222	ENST00000493792	GGPS1	O95749	300 aa		11.9	□□□□□ -0.5

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