RNA–Protein interactions for RNA: ENST00000493758.5

ITGB1-216, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 366 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-216ENST00000493758 CIAPIN1Q6FI81 312 aa6.55□□□□□ -1.36
ITGB1-216ENST00000493758 ETV3LQ6ZN32 361 aa6.55□□□□□ -1.36
ITGB1-216ENST00000493758 FAM126BQ8IXS8 530 aa6.55□□□□□ -1.36
ITGB1-216ENST00000493758 LILRB2Q8N423 598 aa6.55□□□□□ -1.36
ITGB1-216ENST00000493758 ZSCAN18Q8TBC5 510 aaPredicted RBP6.55□□□□□ -1.36
ITGB1-216ENST00000493758 DACT3Q96B18 629 aaPredicted RBP6.55□□□□□ -1.36
ITGB1-216ENST00000493758 ALG1Q9BT22 464 aa6.55□□□□□ -1.36
ITGB1-216ENST00000493758 ZSWIM4Q9H7M6 989 aa6.55□□□□□ -1.36
ITGB1-216ENST00000493758 PALD1Q9ULE6 856 aa6.55□□□□□ -1.36
ITGB1-216ENST00000493758 BLACEA4D250 179 aa6.54□□□□□ -1.36
ITGB1-216ENST00000493758 ATF2P15336 505 aa6.54□□□□□ -1.36
ITGB1-216ENST00000493758 PI3P19957 117 aa6.54□□□□□ -1.36
ITGB1-216ENST00000493758 CFPP27918 469 aa6.54□□□□□ -1.36
ITGB1-216ENST00000493758 STEAP3Q658P3 488 aa6.54□□□□□ -1.36
ITGB1-216ENST00000493758 UHMK1Q8TAS1 419 aaKnown RBP6.54□□□□□ -1.36
ITGB1-216ENST00000493758 SMOC1Q9H4F8 434 aa6.54□□□□□ -1.36
ITGB1-216ENST00000493758 RXFP1Q9HBX9 757 aa6.54□□□□□ -1.36
ITGB1-216ENST00000493758 SLC6A20Q9NP91 592 aa6.54□□□□□ -1.36
ITGB1-216ENST00000493758 NGRNQ9NPE2 291 aaKnown RBP6.54□□□□□ -1.36
ITGB1-216ENST00000493758 TMEM260Q9NX78 707 aa6.54□□□□□ -1.36
ITGB1-216ENST00000493758 SIT1Q9Y3P8 196 aa6.54□□□□□ -1.36
ITGB1-216ENST00000493758 FAM47E-STBD1D6RA91 191 aa6.53□□□□□ -1.36
ITGB1-216ENST00000493758 KRIT1O00522 736 aa6.53□□□□□ -1.36
ITGB1-216ENST00000493758 SOD2P04179 222 aa6.53□□□□□ -1.36
ITGB1-216ENST00000493758 OTOP3Q7RTS5 596 aa6.53□□□□□ -1.36
ITGB1-216ENST00000493758 PPARGC1AQ9UBK2 798 aaKnown RBP6.53□□□□□ -1.36
ITGB1-216ENST00000493758 PCDHB4Q9Y5E5 795 aa6.53□□□□□ -1.36
ITGB1-216ENST00000493758 TCRBV5S2A0A599 114 aa6.52□□□□□ -1.37
ITGB1-216ENST00000493758 NUAK1O60285 661 aa6.52□□□□□ -1.37
ITGB1-216ENST00000493758 C8BP07358 591 aa6.52□□□□□ -1.37
ITGB1-216ENST00000493758 SPIRE1Q08AE8 756 aa6.52□□□□□ -1.37
ITGB1-216ENST00000493758 PAK1Q13153 545 aa6.52□□□□□ -1.37
ITGB1-216ENST00000493758 CNKSR3Q6P9H4 555 aa6.52□□□□□ -1.37
ITGB1-216ENST00000493758 SPOCD1Q6ZMY3 1216 aa6.52□□□□□ -1.37
ITGB1-216ENST00000493758 KRTAP1-3Q8IUG1 177 aa6.52□□□□□ -1.37
ITGB1-216ENST00000493758 NLGN1Q8N2Q7 840 aa6.52□□□□□ -1.37
ITGB1-216ENST00000493758 SYNPOQ8N3V7 929 aa6.52□□□□□ -1.37
ITGB1-216ENST00000493758 LINC00482Q8N8I6 264 aa6.52□□□□□ -1.37
ITGB1-216ENST00000493758 PANK1Q8TE04 598 aa6.52□□□□□ -1.37
ITGB1-216ENST00000493758 CHAMP1Q96JM3 812 aa6.52□□□□□ -1.37
ITGB1-216ENST00000493758 PIF1Q9H611 641 aa6.52□□□□□ -1.37
ITGB1-216ENST00000493758 NCOA5Q9HCD5 579 aaKnown RBP6.52□□□□□ -1.37
ITGB1-216ENST00000493758 MYOTQ9UBF9 498 aa6.52□□□□□ -1.37
ITGB1-216ENST00000493758 SFMBT1Q9UHJ3 866 aa6.52□□□□□ -1.37
ITGB1-216ENST00000493758 NUB1Q9Y5A7 615 aa6.52□□□□□ -1.37
ITGB1-216ENST00000493758 EPHA5P54756 1037 aa6.51□□□□□ -1.37
ITGB1-216ENST00000493758 NCKAP1LP55160 1127 aa6.51□□□□□ -1.37
ITGB1-216ENST00000493758 SQSTM1Q13501 440 aa6.51□□□□□ -1.37
ITGB1-216ENST00000493758 TCERG1LQ5VWI1 586 aa6.51□□□□□ -1.37
ITGB1-216ENST00000493758 MILR1Q7Z6M3 343 aa6.51□□□□□ -1.37
ITGB1-216ENST00000493758 ZC3H18Q86VM9 953 aaKnown RBP6.51□□□□□ -1.37
ITGB1-216ENST00000493758 TRIM48Q8IWZ4 208 aa6.51□□□□□ -1.37
ITGB1-216ENST00000493758 SLC52A2Q9HAB3 445 aa6.51□□□□□ -1.37
ITGB1-216ENST00000493758 DTLQ9NZJ0 730 aa6.51□□□□□ -1.37
ITGB1-216ENST00000493758 ASH2LQ9UBL3 628 aa6.51□□□□□ -1.37
ITGB1-216ENST00000493758 TRAF6Q9Y4K3 522 aa6.51□□□□□ -1.37
ITGB1-216ENST00000493758 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.5□□□□□ -1.37
ITGB1-216ENST00000493758 SH3D21A4FU49 640 aa6.5□□□□□ -1.37
ITGB1-216ENST00000493758 PLD2O14939 933 aa6.5□□□□□ -1.37
ITGB1-216ENST00000493758 CYP2C8P10632 490 aa6.5□□□□□ -1.37
ITGB1-216ENST00000493758 MC3RP41968 323 aa6.5□□□□□ -1.37
ITGB1-216ENST00000493758 FOXO4P98177 505 aa6.5□□□□□ -1.37
ITGB1-216ENST00000493758 DLX2Q07687 328 aaPredicted RBP6.5□□□□□ -1.37
ITGB1-216ENST00000493758 VWA3BQ502W6 1294 aa6.5□□□□□ -1.37
ITGB1-216ENST00000493758 LCNL1Q6ZST4 164 aa6.5□□□□□ -1.37
ITGB1-216ENST00000493758 SAPCD2Q86UD0 394 aa6.5□□□□□ -1.37
ITGB1-216ENST00000493758 MTDHQ86UE4 582 aaKnown RBP6.5□□□□□ -1.37
ITGB1-216ENST00000493758 PCDH19Q8TAB3 1148 aa6.5□□□□□ -1.37
ITGB1-216ENST00000493758 PIP4K2CQ8TBX8 421 aa6.5□□□□□ -1.37
ITGB1-216ENST00000493758 SH3TC2Q8TF17 1288 aa6.5□□□□□ -1.37
ITGB1-216ENST00000493758 FAN1Q9Y2M0 1017 aa6.5□□□□□ -1.37
ITGB1-216ENST00000493758 PLA2G1BP04054 148 aaKnown RBP6.49□□□□□ -1.37
ITGB1-216ENST00000493758 GNAT1P11488 350 aa6.49□□□□□ -1.37
ITGB1-216ENST00000493758 LIMS1P48059 325 aa6.49□□□□□ -1.37
ITGB1-216ENST00000493758 AFF3P51826 1226 aaKnown RBP6.49□□□□□ -1.37
ITGB1-216ENST00000493758 FZD5Q13467 585 aa6.49□□□□□ -1.37
ITGB1-216ENST00000493758 CR1LQ2VPA4 569 aa6.49□□□□□ -1.37
ITGB1-216ENST00000493758 FNDC3BQ53EP0 1204 aaKnown RBP6.49□□□□□ -1.37
ITGB1-216ENST00000493758 LINC01356Q8N9X3 169 aa6.49□□□□□ -1.37
ITGB1-216ENST00000493758 SMARCC2Q8TAQ2 1214 aa6.49□□□□□ -1.37
ITGB1-216ENST00000493758 FNIP1Q8TF40 1166 aa6.49□□□□□ -1.37
ITGB1-216ENST00000493758 JAM3Q9BX67 310 aa6.49□□□□□ -1.37
ITGB1-216ENST00000493758 BCAS3Q9H6U6 928 aa6.49□□□□□ -1.37
ITGB1-216ENST00000493758 IPPKQ9H8X2 491 aa6.49□□□□□ -1.37
ITGB1-216ENST00000493758 TRIM39Q9HCM9 518 aa6.49□□□□□ -1.37
ITGB1-216ENST00000493758 RFPL3O75679 317 aa6.48□□□□□ -1.37
ITGB1-216ENST00000493758 NPTXRO95502 500 aa6.48□□□□□ -1.37
ITGB1-216ENST00000493758 ZSCAN22P10073 491 aaPredicted RBP6.48□□□□□ -1.37
ITGB1-216ENST00000493758 FIGNQ5HY92 759 aa6.48□□□□□ -1.37
ITGB1-216ENST00000493758 ARRDC4Q8NCT1 418 aa6.48□□□□□ -1.37
ITGB1-216ENST00000493758 SLC7A14Q8TBB6 771 aa6.48□□□□□ -1.37
ITGB1-216ENST00000493758 FBXW5Q969U6 566 aa6.48□□□□□ -1.37
ITGB1-216ENST00000493758 PWWP2AQ96N64 755 aa6.48□□□□□ -1.37
ITGB1-216ENST00000493758 CELF4Q9BZC1 486 aaKnown RBP6.48□□□□□ -1.37
ITGB1-216ENST00000493758 PMF1-BGLAPU3KQ54 211 aa6.48□□□□□ -1.37
ITGB1-216ENST00000493758 GSTA4O15217 222 aa6.47□□□□□ -1.37
ITGB1-216ENST00000493758 CRTAMO95727 393 aa6.47□□□□□ -1.37
ITGB1-216ENST00000493758 GUCY1A3Q02108 690 aa6.47□□□□□ -1.37
ITGB1-216ENST00000493758 TEPPQ6URK8 271 aa6.47□□□□□ -1.37
ITGB1-216ENST00000493758 C16orf59Q7L2K0 433 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms