RNA–Protein interactions for RNA: ENST00000493594.6

GBP3-208, Transcript of guanylate binding protein 3, humanhuman

TSL 1 (best)

Gene GBP3, Length 2,561 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GBP3-208ENST00000493594 MYH2Q9UKX2 1941 aa9.19□□□□□ -0.94
GBP3-208ENST00000493594 PNPLA7Q6ZV29 1317 aa9.19□□□□□ -0.94
GBP3-208ENST00000493594 PARP4Q9UKK3 1724 aaKnown RBP9.19□□□□□ -0.94
GBP3-208ENST00000493594 BUB1BO60566 1050 aaPredicted RBP9.18□□□□□ -0.94
GBP3-208ENST00000493594 RTN2O75298 545 aa9.18□□□□□ -0.94
GBP3-208ENST00000493594 FGFR2P21802 821 aa9.18□□□□□ -0.94
GBP3-208ENST00000493594 CCNHP51946 323 aaPredicted RBP9.18□□□□□ -0.94
GBP3-208ENST00000493594 MYO1EQ12965 1108 aa9.18□□□□□ -0.94
GBP3-208ENST00000493594 XRCC4Q13426 336 aa9.18□□□□□ -0.94
GBP3-208ENST00000493594 PFKFB3Q16875 520 aaPredicted RBP9.18□□□□□ -0.94
GBP3-208ENST00000493594 TXNRD1Q16881 649 aa9.18□□□□□ -0.94
GBP3-208ENST00000493594 MEI1Q5TIA1 1274 aa9.18□□□□□ -0.94
GBP3-208ENST00000493594 DYMQ7RTS9 669 aa9.18□□□□□ -0.94
GBP3-208ENST00000493594 CCDC84Q86UT8 332 aaPredicted RBP9.18□□□□□ -0.94
GBP3-208ENST00000493594 CABP7Q86V35 215 aa9.18□□□□□ -0.94
GBP3-208ENST00000493594 PROSER2Q86WR7 435 aaPredicted RBP9.18□□□□□ -0.94
GBP3-208ENST00000493594 FMNL3Q8IVF7 1028 aa9.18□□□□□ -0.94
GBP3-208ENST00000493594 TATDN2Q93075 761 aa9.18□□□□□ -0.94
GBP3-208ENST00000493594 DDX47Q9H0S4 455 aaKnown RBP9.18□□□□□ -0.94
GBP3-208ENST00000493594 ISCUQ9H1K1 167 aa9.18□□□□□ -0.94
GBP3-208ENST00000493594 ATP6V0A4Q9HBG4 840 aa9.18□□□□□ -0.94
GBP3-208ENST00000493594 ADAMTS1Q9UHI8 967 aa9.18□□□□□ -0.94
GBP3-208ENST00000493594 MAGEB6P1A0A0J9YX57 407 aa9.18□□□□□ -0.94
GBP3-208ENST00000493594 CEP104O60308 925 aa9.18□□□□□ -0.94
GBP3-208ENST00000493594 CALM1P0DP23 149 aa9.18□□□□□ -0.94
GBP3-208ENST00000493594 CALM2P0DP24 149 aa9.18□□□□□ -0.94
GBP3-208ENST00000493594 CALM3P0DP25 149 aa9.18□□□□□ -0.94
GBP3-208ENST00000493594 PEX19P40855 299 aa9.18□□□□□ -0.94
GBP3-208ENST00000493594 LRRC41Q15345 812 aa9.18□□□□□ -0.94
GBP3-208ENST00000493594 KRT71Q3SY84 523 aa9.18□□□□□ -0.94
GBP3-208ENST00000493594 PDXDC1Q6P996 788 aa9.18□□□□□ -0.94
GBP3-208ENST00000493594 RUFY4Q6ZNE9 571 aa9.18□□□□□ -0.94
GBP3-208ENST00000493594 TBC1D1Q86TI0 1168 aaPredicted RBP9.18□□□□□ -0.94
GBP3-208ENST00000493594 DNAJC10Q8IXB1 793 aa9.18□□□□□ -0.94
GBP3-208ENST00000493594 C1orf131Q8NDD1 294 aaKnown RBP9.18□□□□□ -0.94
GBP3-208ENST00000493594 NSMCE1Q8WV22 266 aa9.18□□□□□ -0.94
GBP3-208ENST00000493594 RSRC1Q96IZ7 334 aaKnown RBP9.18□□□□□ -0.94
GBP3-208ENST00000493594 INPP4AQ96PE3 977 aaPredicted RBP9.18□□□□□ -0.94
GBP3-208ENST00000493594 FER1L4A9Z1Z3 1794 aa9.18□□□□□ -0.94
GBP3-208ENST00000493594 KIF1AQ12756 1690 aa9.18□□□□□ -0.94
GBP3-208ENST00000493594 LMTK3Q96Q04 1460 aa9.18□□□□□ -0.94
GBP3-208ENST00000493594 F8W031 263 aaPredicted RBP9.18□□□□□ -0.94
GBP3-208ENST00000493594 DAPK3O43293 454 aa9.18□□□□□ -0.94
GBP3-208ENST00000493594 TLR2O60603 784 aa9.18□□□□□ -0.94
GBP3-208ENST00000493594 TECP42680 631 aa9.18□□□□□ -0.94
GBP3-208ENST00000493594 NAB2Q15742 525 aa9.18□□□□□ -0.94
GBP3-208ENST00000493594 SLC9C1Q4G0N8 1177 aa9.18□□□□□ -0.94
GBP3-208ENST00000493594 NUP188Q5SRE5 1749 aa9.18□□□□□ -0.94
GBP3-208ENST00000493594 LRIG3Q6UXM1 1119 aa9.18□□□□□ -0.94
GBP3-208ENST00000493594 STAG2Q8N3U4 1231 aa9.18□□□□□ -0.94
GBP3-208ENST00000493594 MAGEC3Q8TD91 643 aa9.18□□□□□ -0.94
GBP3-208ENST00000493594 TAF4BQ92750 862 aa9.18□□□□□ -0.94
GBP3-208ENST00000493594 LRRC45Q96CN5 670 aa9.18□□□□□ -0.94
GBP3-208ENST00000493594 TRIM31Q9BZY9 425 aa9.18□□□□□ -0.94
GBP3-208ENST00000493594 TCP11L1Q9NUJ3 509 aa9.18□□□□□ -0.94
GBP3-208ENST00000493594 A0A087X0T9 212 aa9.17□□□□□ -0.94
GBP3-208ENST00000493594 SRRM3A6NNA2 597 aaPredicted RBP9.17□□□□□ -0.94
GBP3-208ENST00000493594 USP17L12C9JPN9 530 aa9.17□□□□□ -0.94
GBP3-208ENST00000493594 USP17L21D6R901 530 aa9.17□□□□□ -0.94
GBP3-208ENST00000493594 SART1O43290 800 aaKnown RBP9.17□□□□□ -0.94
GBP3-208ENST00000493594 PPIP5K2O43314 1243 aa9.17□□□□□ -0.94
GBP3-208ENST00000493594 CTNND1O60716 968 aaKnown RBP9.17□□□□□ -0.94
GBP3-208ENST00000493594 TRIM37O94972 964 aa9.17□□□□□ -0.94
GBP3-208ENST00000493594 MYL1P05976 194 aa9.17□□□□□ -0.94
GBP3-208ENST00000493594 FAM228BP0C875 321 aa9.17□□□□□ -0.94
GBP3-208ENST00000493594 POLR2FP61218 127 aaKnown RBP9.17□□□□□ -0.94
GBP3-208ENST00000493594 IFFO1Q0D2I5 559 aa9.17□□□□□ -0.94
GBP3-208ENST00000493594 KCNMA1Q12791 1236 aa9.17□□□□□ -0.94
GBP3-208ENST00000493594 MAN2A1Q16706 1144 aa9.17□□□□□ -0.94
GBP3-208ENST00000493594 LACTB2Q53H82 288 aaPredicted RBP9.17□□□□□ -0.94
GBP3-208ENST00000493594 FAM133BQ5BKY9 247 aaKnown RBP9.17□□□□□ -0.94
GBP3-208ENST00000493594 GIGYF2Q6Y7W6 1299 aaKnown RBP9.17□□□□□ -0.94
GBP3-208ENST00000493594 CUL5Q93034 780 aa9.17□□□□□ -0.94
GBP3-208ENST00000493594 SPDL1Q96EA4 605 aa9.17□□□□□ -0.94
GBP3-208ENST00000493594 CCSER1Q9C0I3 900 aa9.17□□□□□ -0.94
GBP3-208ENST00000493594 DPH5Q9H2P9 285 aa9.17□□□□□ -0.94
GBP3-208ENST00000493594 AMACRQ9UHK6 382 aa9.17□□□□□ -0.94
GBP3-208ENST00000493594 GGT7Q9UJ14 662 aa9.17□□□□□ -0.94
GBP3-208ENST00000493594 PCDHA4Q9UN74 947 aa9.17□□□□□ -0.94
GBP3-208ENST00000493594 GRID2IPA4D2P6 1211 aa9.17□□□□□ -0.94
GBP3-208ENST00000493594 DDAH1O94760 285 aa9.17□□□□□ -0.94
GBP3-208ENST00000493594 ANP32DO95626 131 aa9.17□□□□□ -0.94
GBP3-208ENST00000493594 DRD4P21917 467 aa9.17□□□□□ -0.94
GBP3-208ENST00000493594 GCKP35557 465 aa9.17□□□□□ -0.94
GBP3-208ENST00000493594 DHX9Q08211 1270 aaKnown RBP9.17□□□□□ -0.94
GBP3-208ENST00000493594 BIRC3Q13489 604 aa9.17□□□□□ -0.94
GBP3-208ENST00000493594 RPS6KA1Q15418 735 aa9.17□□□□□ -0.94
GBP3-208ENST00000493594 SFMBT2Q5VUG0 894 aa9.17□□□□□ -0.94
GBP3-208ENST00000493594 CENPPQ6IPU0 288 aa9.17□□□□□ -0.94
GBP3-208ENST00000493594 CNNM4Q6P4Q7 775 aa9.17□□□□□ -0.94
GBP3-208ENST00000493594 GLIS3Q8NEA6 775 aa9.17□□□□□ -0.94
GBP3-208ENST00000493594 ZCRB1Q8TBF4 217 aaKnown RBP9.17□□□□□ -0.94
GBP3-208ENST00000493594 TBC1D22AQ8WUA7 517 aa9.17□□□□□ -0.94
GBP3-208ENST00000493594 PNMA2Q9UL42 364 aa9.17□□□□□ -0.94
GBP3-208ENST00000493594 PCDHA6Q9UN73 950 aa9.17□□□□□ -0.94
GBP3-208ENST00000493594 PCDHA8Q9Y5H6 950 aa9.17□□□□□ -0.94
GBP3-208ENST00000493594 SSU72P8A0A1W2PR75 194 aa9.16□□□□□ -0.94
GBP3-208ENST00000493594 TLDC2A0PJX2 215 aa9.16□□□□□ -0.94
GBP3-208ENST00000493594 FAM170AA1A519 330 aa9.16□□□□□ -0.94
GBP3-208ENST00000493594 C5orf60A6NFR6 353 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms