RNA–Protein interactions for RNA: ENST00000493518.5

CACUL1-206, Transcript of CDK2 associated cullin domain 1, humanhuman

TSL 1 (best)

Gene CACUL1, Length 3,217 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACUL1-206ENST00000493518 AENQ8WTP8 325 aaKnown RBP17.2■□□□□ 0.34
CACUL1-206ENST00000493518 TSG101Q99816 390 aa17.2■□□□□ 0.34
CACUL1-206ENST00000493518 TSGA10Q9BZW7 698 aa17.2■□□□□ 0.34
CACUL1-206ENST00000493518 A0A087X0T9 212 aa17.2■□□□□ 0.34
CACUL1-206ENST00000493518 USP17L15C9J2P7 530 aa17.2■□□□□ 0.34
CACUL1-206ENST00000493518 USP17L13C9JLJ4 530 aa17.2■□□□□ 0.34
CACUL1-206ENST00000493518 USP17L11C9JVI0 530 aa17.2■□□□□ 0.34
CACUL1-206ENST00000493518 USP17L18D6R9N7 530 aa17.2■□□□□ 0.34
CACUL1-206ENST00000493518 USP17L22D6RA61 530 aa17.2■□□□□ 0.34
CACUL1-206ENST00000493518 USP17L17D6RBQ6 530 aa17.2■□□□□ 0.34
CACUL1-206ENST00000493518 USP17L19D6RCP7 530 aa17.2■□□□□ 0.34
CACUL1-206ENST00000493518 USP17L20D6RJB6 530 aa17.2■□□□□ 0.34
CACUL1-206ENST00000493518 MYO1FO00160 1098 aa17.2■□□□□ 0.34
CACUL1-206ENST00000493518 FAM228BP0C875 321 aa17.2■□□□□ 0.34
CACUL1-206ENST00000493518 INPP5BP32019 993 aa17.2■□□□□ 0.34
CACUL1-206ENST00000493518 USP17L24Q0WX57 530 aa17.2■□□□□ 0.34
CACUL1-206ENST00000493518 FAM83BQ5T0W9 1011 aa17.2■□□□□ 0.34
CACUL1-206ENST00000493518 SFMBT2Q5VUG0 894 aa17.2■□□□□ 0.34
CACUL1-206ENST00000493518 USP17L6PQ6QN14 398 aa17.2■□□□□ 0.34
CACUL1-206ENST00000493518 RNPC3Q96LT9 517 aaKnown RBP17.2■□□□□ 0.34
CACUL1-206ENST00000493518 PNMA5Q96PV4 448 aa17.2■□□□□ 0.34
CACUL1-206ENST00000493518 SPAG5Q96R06 1193 aa17.2■□□□□ 0.34
CACUL1-206ENST00000493518 IKZF4Q9H2S9 585 aa17.2■□□□□ 0.34
CACUL1-206ENST00000493518 SFI1A8K8P3 1242 aa17.19■□□□□ 0.34
CACUL1-206ENST00000493518 AARSP49588 968 aaKnown RBP eCLIP17.19■□□□□ 0.34
CACUL1-206ENST00000493518 SLC9C1Q4G0N8 1177 aa17.19■□□□□ 0.34
CACUL1-206ENST00000493518 CFAP221Q4G0U5 840 aa17.19■□□□□ 0.34
CACUL1-206ENST00000493518 KLHDC7AQ5VTJ3 777 aa17.19■□□□□ 0.34
CACUL1-206ENST00000493518 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.19■□□□□ 0.34
CACUL1-206ENST00000493518 COPB2P35606 906 aa17.19■□□□□ 0.34
CACUL1-206ENST00000493518 CYP4A11Q02928 519 aa17.19■□□□□ 0.34
CACUL1-206ENST00000493518 RPGRIP1Q96KN7 1286 aa17.19■□□□□ 0.34
CACUL1-206ENST00000493518 DPH5Q9H2P9 285 aa17.19■□□□□ 0.34
CACUL1-206ENST00000493518 SIK3Q9Y2K2 1263 aa17.19■□□□□ 0.34
CACUL1-206ENST00000493518 ADAMTSL3P82987 1691 aa17.19■□□□□ 0.34
CACUL1-206ENST00000493518 NUP98P52948 1817 aa17.19■□□□□ 0.34
CACUL1-206ENST00000493518 LMTK3Q96Q04 1460 aa17.19■□□□□ 0.34
CACUL1-206ENST00000493518 C6orf229H3BNL8 230 aa17.19■□□□□ 0.34
CACUL1-206ENST00000493518 OPA1O60313 960 aa17.19■□□□□ 0.34
CACUL1-206ENST00000493518 KIAA0754O94854 1291 aa17.19■□□□□ 0.34
CACUL1-206ENST00000493518 TCP1P17987 556 aaKnown RBP17.19■□□□□ 0.34
CACUL1-206ENST00000493518 IKQ13123 557 aaPredicted RBP17.19■□□□□ 0.34
CACUL1-206ENST00000493518 PPFIA1Q13136 1202 aa17.19■□□□□ 0.34
CACUL1-206ENST00000493518 AMIGO3Q86WK7 504 aa17.19■□□□□ 0.34
CACUL1-206ENST00000493518 MYOCDQ8IZQ8 938 aa17.19■□□□□ 0.34
CACUL1-206ENST00000493518 TAF4BQ92750 862 aa17.19■□□□□ 0.34
CACUL1-206ENST00000493518 KAT2BQ92831 832 aa17.19■□□□□ 0.34
CACUL1-206ENST00000493518 VIPAS39Q9H9C1 493 aa17.19■□□□□ 0.34
CACUL1-206ENST00000493518 PANK4Q9NVE7 773 aa17.19■□□□□ 0.34
CACUL1-206ENST00000493518 POTEB3A0JP26 581 aa17.18■□□□□ 0.34
CACUL1-206ENST00000493518 ANO9A1A5B4 782 aa17.18■□□□□ 0.34
CACUL1-206ENST00000493518 TARSL2A2RTX5 802 aaKnown RBP17.18■□□□□ 0.34
CACUL1-206ENST00000493518 POTECB2RU33 542 aa17.18■□□□□ 0.34
CACUL1-206ENST00000493518 E7EVH7 732 aa17.18■□□□□ 0.34
CACUL1-206ENST00000493518 POTEBQ6S5H4 581 aa17.18■□□□□ 0.34
CACUL1-206ENST00000493518 FNBP4Q8N3X1 1017 aaPredicted RBP17.18■□□□□ 0.34
CACUL1-206ENST00000493518 ERGIC2Q96RQ1 377 aa17.18■□□□□ 0.34
CACUL1-206ENST00000493518 MXD3Q9BW11 206 aa17.18■□□□□ 0.34
CACUL1-206ENST00000493518 DDX47Q9H0S4 455 aaKnown RBP17.18■□□□□ 0.34
CACUL1-206ENST00000493518 CICQ96RK0 1608 aaPredicted RBP17.18■□□□□ 0.34
CACUL1-206ENST00000493518 FGRP09769 529 aa17.18■□□□□ 0.34
CACUL1-206ENST00000493518 KCNMA1Q12791 1236 aa17.18■□□□□ 0.34
CACUL1-206ENST00000493518 GJB7Q6PEY0 223 aa17.18■□□□□ 0.34
CACUL1-206ENST00000493518 DPP8Q6V1X1 898 aaPredicted RBP17.18■□□□□ 0.34
CACUL1-206ENST00000493518 RETREG2Q8NC44 543 aa17.18■□□□□ 0.34
CACUL1-206ENST00000493518 UBLCP1Q8WVY7 318 aaPredicted RBP17.18■□□□□ 0.34
CACUL1-206ENST00000493518 C7orf25Q9BPX7 421 aa17.18■□□□□ 0.34
CACUL1-206ENST00000493518 PALM3A6NDB9 673 aaPredicted RBP17.17■□□□□ 0.34
CACUL1-206ENST00000493518 EPHB4P54760 987 aa17.17■□□□□ 0.34
CACUL1-206ENST00000493518 IFT88Q13099 833 aa17.17■□□□□ 0.34
CACUL1-206ENST00000493518 FAM26FQ5R3K3 315 aa17.17■□□□□ 0.34
CACUL1-206ENST00000493518 CCDC84Q86UT8 332 aaPredicted RBP17.17■□□□□ 0.34
CACUL1-206ENST00000493518 OTUD6BQ8N6M0 293 aa17.17■□□□□ 0.34
CACUL1-206ENST00000493518 CLIC2O15247 247 aa17.17■□□□□ 0.34
CACUL1-206ENST00000493518 UFL1O94874 794 aa17.17■□□□□ 0.34
CACUL1-206ENST00000493518 ICE2Q659A1 982 aa17.17■□□□□ 0.34
CACUL1-206ENST00000493518 ZMYND12Q9H0C1 365 aa17.17■□□□□ 0.34
CACUL1-206ENST00000493518 ZNF142P52746 1687 aaPredicted RBP17.17■□□□□ 0.34
CACUL1-206ENST00000493518 M0R2N6 131 aa17.17■□□□□ 0.34
CACUL1-206ENST00000493518 EIF3HO15372 352 aaKnown RBP eCLIP17.17■□□□□ 0.34
CACUL1-206ENST00000493518 TLR2O60603 784 aa17.17■□□□□ 0.34
CACUL1-206ENST00000493518 SLC9A1P19634 815 aa17.17■□□□□ 0.34
CACUL1-206ENST00000493518 ABCB4P21439 1286 aa17.17■□□□□ 0.34
CACUL1-206ENST00000493518 TMOD1P28289 359 aa17.17■□□□□ 0.34
CACUL1-206ENST00000493518 SCNN1DP51172 638 aa17.17■□□□□ 0.34
CACUL1-206ENST00000493518 ADCY7P51828 1080 aa17.17■□□□□ 0.34
CACUL1-206ENST00000493518 MFSD14BQ5SR56 506 aa17.17■□□□□ 0.34
CACUL1-206ENST00000493518 CENPPQ6IPU0 288 aa17.17■□□□□ 0.34
CACUL1-206ENST00000493518 PDXDC1Q6P996 788 aa17.17■□□□□ 0.34
CACUL1-206ENST00000493518 TPTE2Q6XPS3 522 aa17.17■□□□□ 0.34
CACUL1-206ENST00000493518 GOPCQ9HD26 462 aa17.17■□□□□ 0.34
CACUL1-206ENST00000493518 RAD51CO43502 376 aa17.16■□□□□ 0.34
CACUL1-206ENST00000493518 PCP11498 1178 aaKnown RBP17.16■□□□□ 0.34
CACUL1-206ENST00000493518 CACNB3P54284 484 aa17.16■□□□□ 0.34
CACUL1-206ENST00000493518 COASYQ13057 564 aa17.16■□□□□ 0.34
CACUL1-206ENST00000493518 PABPC4Q13310 644 aaKnown RBP eCLIP17.16■□□□□ 0.344e-6■■□□□ 12.2
CACUL1-206ENST00000493518 PLS1Q14651 629 aa17.16■□□□□ 0.34
CACUL1-206ENST00000493518 SF3B3Q15393 1217 aaKnown RBP17.16■□□□□ 0.34
CACUL1-206ENST00000493518 UNC13DQ70J99 1090 aa17.16■□□□□ 0.34
CACUL1-206ENST00000493518 GPBP1Q86WP2 473 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms