RNA–Protein interactions for RNA: ENST00000493259.5

CPA4-210, Transcript of carboxypeptidase A4, humanhuman

TSL 2 BASIC

Gene CPA4, Length 1,512 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPA4-210ENST00000493259 SYTL5Q8TDW5 730 aaPredicted RBP12.77□□□□□ -0.37
CPA4-210ENST00000493259 OTUD7AQ8TE49 926 aaPredicted RBP12.77□□□□□ -0.37
CPA4-210ENST00000493259 NSUN6Q8TEA1 469 aaKnown RBP12.77□□□□□ -0.37
CPA4-210ENST00000493259 UBA5Q9GZZ9 404 aa12.77□□□□□ -0.37
CPA4-210ENST00000493259 NSUN3Q9H649 340 aaKnown RBP12.77□□□□□ -0.37
CPA4-210ENST00000493259 TCP11L1Q9NUJ3 509 aa12.77□□□□□ -0.37
CPA4-210ENST00000493259 RSPH10B2B2RC85 870 aa12.76□□□□□ -0.37
CPA4-210ENST00000493259 UPP2O95045 317 aa12.76□□□□□ -0.37
CPA4-210ENST00000493259 RSPH10BP0C881 870 aa12.76□□□□□ -0.37
CPA4-210ENST00000493259 THPOP40225 353 aa12.76□□□□□ -0.37
CPA4-210ENST00000493259 LAMC2Q13753 1193 aa12.76□□□□□ -0.37
CPA4-210ENST00000493259 COL19A1Q14993 1142 aa12.76□□□□□ -0.37
CPA4-210ENST00000493259 CLUL1Q15846 466 aa12.76□□□□□ -0.37
CPA4-210ENST00000493259 FBXO11Q86XK2 927 aa12.76□□□□□ -0.37
CPA4-210ENST00000493259 TMEM192Q8IY95 271 aa12.76□□□□□ -0.37
CPA4-210ENST00000493259 PPTC7Q8NI37 304 aa12.76□□□□□ -0.37
CPA4-210ENST00000493259 EMID1Q96A84 441 aaPredicted RBP12.76□□□□□ -0.37
CPA4-210ENST00000493259 MFSD14AQ96MC6 490 aa12.76□□□□□ -0.37
CPA4-210ENST00000493259 IWS1Q96ST2 819 aa12.76□□□□□ -0.37
CPA4-210ENST00000493259 RMDN3Q96TC7 470 aa12.76□□□□□ -0.37
CPA4-210ENST00000493259 PHOX2BQ99453 314 aa12.76□□□□□ -0.37
CPA4-210ENST00000493259 UPF3BQ9BZI7 483 aaKnown RBP12.76□□□□□ -0.37
CPA4-210ENST00000493259 MUTYHQ9UIF7 546 aa12.76□□□□□ -0.37
CPA4-210ENST00000493259 MRVI1Q9Y6F6 885 aa12.76□□□□□ -0.37
CPA4-210ENST00000493259 SORBS3O60504 671 aa12.75□□□□□ -0.37
CPA4-210ENST00000493259 EIF2AK2P19525 551 aaKnown RBP12.75□□□□□ -0.37
CPA4-210ENST00000493259 LTBRP36941 435 aa12.75□□□□□ -0.37
CPA4-210ENST00000493259 CDC37Q16543 378 aaPredicted RBP12.75□□□□□ -0.37
CPA4-210ENST00000493259 PLEKHG4Q58EX7 1191 aa12.75□□□□□ -0.37
CPA4-210ENST00000493259 ARHGEF16Q5VV41 709 aa12.75□□□□□ -0.37
CPA4-210ENST00000493259 RPAINQ86UA6 219 aa12.75□□□□□ -0.37
CPA4-210ENST00000493259 TOP1MTQ969P6 601 aa12.75□□□□□ -0.37
CPA4-210ENST00000493259 MICAL3Q7RTP6 2002 aa12.75□□□□□ -0.37
CPA4-210ENST00000493259 KIAA1217Q5T5P2 1943 aa12.75□□□□□ -0.37
CPA4-210ENST00000493259 ABCB11O95342 1321 aa12.74□□□□□ -0.37
CPA4-210ENST00000493259 EIF3JO75822 258 aaKnown RBP12.74□□□□□ -0.37
CPA4-210ENST00000493259 FGAP02671 866 aa12.74□□□□□ -0.37
CPA4-210ENST00000493259 NEFLP07196 543 aa12.74□□□□□ -0.37
CPA4-210ENST00000493259 GPATCH4Q5T3I0 446 aaKnown RBP12.74□□□□□ -0.37
CPA4-210ENST00000493259 SERINC5Q86VE9 423 aa12.74□□□□□ -0.37
CPA4-210ENST00000493259 TTC14Q96N46 770 aa12.74□□□□□ -0.37
CPA4-210ENST00000493259 HAND2P61296 217 aa12.73□□□□□ -0.37
CPA4-210ENST00000493259 DLX2Q07687 328 aaPredicted RBP12.73□□□□□ -0.37
CPA4-210ENST00000493259 ALX1Q15699 326 aa12.73□□□□□ -0.37
CPA4-210ENST00000493259 HSDL1Q3SXM5 330 aa12.73□□□□□ -0.37
CPA4-210ENST00000493259 SEPT8Q92599 483 aa12.73□□□□□ -0.37
CPA4-210ENST00000493259 OSBPL7Q9BZF2 842 aa12.73□□□□□ -0.37
CPA4-210ENST00000493259 MYO15AQ9UKN7 3530 aa12.73□□□□□ -0.37
CPA4-210ENST00000493259 COL4A6Q14031 1691 aa12.73□□□□□ -0.37
CPA4-210ENST00000493259 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.72□□□□□ -0.37
CPA4-210ENST00000493259 C17orf102A2RUQ5 167 aa12.72□□□□□ -0.37
CPA4-210ENST00000493259 MBTPS2O43462 519 aa12.72□□□□□ -0.37
CPA4-210ENST00000493259 PPFIA4O75335 1185 aa12.72□□□□□ -0.37
CPA4-210ENST00000493259 NR3C2P08235 984 aa12.72□□□□□ -0.37
CPA4-210ENST00000493259 CTSHP09668 335 aa12.72□□□□□ -0.37
CPA4-210ENST00000493259 HOXD8P13378 290 aaPredicted RBP12.72□□□□□ -0.37
CPA4-210ENST00000493259 CTNNB1P35222 781 aa12.72□□□□□ -0.37
CPA4-210ENST00000493259 SMAD2Q15796 467 aaKnown RBP12.72□□□□□ -0.37
CPA4-210ENST00000493259 CTC1Q2NKJ3 1217 aa12.72□□□□□ -0.37
CPA4-210ENST00000493259 HERC4Q5GLZ8 1057 aaPredicted RBP12.72□□□□□ -0.37
CPA4-210ENST00000493259 MYSM1Q5VVJ2 828 aa12.72□□□□□ -0.37
CPA4-210ENST00000493259 MCF2L2Q86YR7 1114 aa12.72□□□□□ -0.37
CPA4-210ENST00000493259 RNF135Q8IUD6 432 aa12.72□□□□□ -0.37
CPA4-210ENST00000493259 PRSS33Q8NF86 280 aa12.72□□□□□ -0.37
CPA4-210ENST00000493259 ATP6V0A1Q93050 837 aa12.72□□□□□ -0.37
CPA4-210ENST00000493259 SPATA33Q96N06 139 aa12.72□□□□□ -0.37
CPA4-210ENST00000493259 POP1Q99575 1024 aaKnown RBP12.72□□□□□ -0.37
CPA4-210ENST00000493259 ZKSCAN3Q9BRR0 538 aa12.72□□□□□ -0.37
CPA4-210ENST00000493259 IFIH1Q9BYX4 1025 aaKnown RBP12.72□□□□□ -0.37
CPA4-210ENST00000493259 MAF1Q9H063 256 aa12.72□□□□□ -0.37
CPA4-210ENST00000493259 PXMP2Q9NR77 195 aa12.72□□□□□ -0.37
CPA4-210ENST00000493259 NLRC5Q86WI3 1866 aa12.72□□□□□ -0.37
CPA4-210ENST00000493259 CFAP54Q96N23 3096 aa12.72□□□□□ -0.37
CPA4-210ENST00000493259 TREHO43280 583 aa12.72□□□□□ -0.37
CPA4-210ENST00000493259 NCK2O43639 380 aa12.72□□□□□ -0.37
CPA4-210ENST00000493259 RGS20O76081 388 aa12.72□□□□□ -0.37
CPA4-210ENST00000493259 CSPG5O95196 566 aa12.72□□□□□ -0.37
CPA4-210ENST00000493259 MX1P20591 662 aa12.72□□□□□ -0.37
CPA4-210ENST00000493259 HYAL1Q12794 435 aa12.72□□□□□ -0.37
CPA4-210ENST00000493259 IER5LQ5T953 404 aa12.72□□□□□ -0.37
CPA4-210ENST00000493259 ADGRF4Q8IZF3 695 aa12.72□□□□□ -0.37
CPA4-210ENST00000493259 C16orf70Q9BSU1 422 aa12.72□□□□□ -0.37
CPA4-210ENST00000493259 ZNF318Q5VUA4 2279 aa12.71□□□□□ -0.37
CPA4-210ENST00000493259 GRM6O15303 877 aa12.71□□□□□ -0.38
CPA4-210ENST00000493259 GGPS1O95749 300 aa12.71□□□□□ -0.38
CPA4-210ENST00000493259 CFBP00751 764 aa12.71□□□□□ -0.38
CPA4-210ENST00000493259 MYCLP12524 364 aaPredicted RBP12.71□□□□□ -0.38
CPA4-210ENST00000493259 GTF2F1P35269 517 aaKnown RBP eCLIP12.71□□□□□ -0.38
CPA4-210ENST00000493259 QRICH1Q2TAL8 776 aa12.71□□□□□ -0.38
CPA4-210ENST00000493259 CELF3Q5SZQ8 465 aaKnown RBP12.71□□□□□ -0.38
CPA4-210ENST00000493259 MFSD6Q6ZSS7 791 aa12.71□□□□□ -0.38
CPA4-210ENST00000493259 FIBCD1Q8N539 461 aa12.71□□□□□ -0.38
CPA4-210ENST00000493259 EDAQ92838 391 aa12.71□□□□□ -0.38
CPA4-210ENST00000493259 FAM227BQ96M60 508 aa12.71□□□□□ -0.38
CPA4-210ENST00000493259 IGFLR1Q9H665 355 aa12.71□□□□□ -0.38
CPA4-210ENST00000493259 HELLSQ9NRZ9 838 aa12.71□□□□□ -0.38
CPA4-210ENST00000493259 RCAN3Q9UKA8 241 aa12.71□□□□□ -0.38
CPA4-210ENST00000493259 MRPL11Q9Y3B7 192 aaKnown RBP12.71□□□□□ -0.38
CPA4-210ENST00000493259 RALGAPA2Q2PPJ7 1873 aa12.71□□□□□ -0.38
CPA4-210ENST00000493259 ATG2AQ2TAZ0 1938 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms