RNA–Protein interactions for RNA: ENST00000493161.1

SAMM50-204, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 3

Gene SAMM50, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-204ENST00000493161 TICAM2Q86XR7 235 aa15.98■□□□□ 0.15
SAMM50-204ENST00000493161 DHX37Q8IY37 1157 aaKnown RBP15.98■□□□□ 0.15
SAMM50-204ENST00000493161 IL31RAQ8NI17 732 aa15.98■□□□□ 0.15
SAMM50-204ENST00000493161 GPKOWQ92917 476 aaPredicted RBP eCLIP15.98■□□□□ 0.15
SAMM50-204ENST00000493161 C17orf80Q9BSJ5 609 aa15.98■□□□□ 0.15
SAMM50-204ENST00000493161 OSBPL7Q9BZF2 842 aa15.98■□□□□ 0.15
SAMM50-204ENST00000493161 MAF1Q9H063 256 aa15.98■□□□□ 0.15
SAMM50-204ENST00000493161 BCAS3Q9H6U6 928 aa15.98■□□□□ 0.15
SAMM50-204ENST00000493161 LMCD1Q9NZU5 365 aa15.98■□□□□ 0.15
SAMM50-204ENST00000493161 LAMA4Q16363 1823 aa15.97■□□□□ 0.15
SAMM50-204ENST00000493161 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.97■□□□□ 0.15
SAMM50-204ENST00000493161 PARNO95453 639 aaKnown RBP15.97■□□□□ 0.15
SAMM50-204ENST00000493161 PARP1P09874 1014 aaKnown RBP15.97■□□□□ 0.15
SAMM50-204ENST00000493161 MYCLP12524 364 aaPredicted RBP15.97■□□□□ 0.15
SAMM50-204ENST00000493161 HOXD8P13378 290 aaPredicted RBP15.97■□□□□ 0.15
SAMM50-204ENST00000493161 HOXA13P31271 388 aaPredicted RBP15.97■□□□□ 0.15
SAMM50-204ENST00000493161 HOXD11P31277 338 aaPredicted RBP15.97■□□□□ 0.15
SAMM50-204ENST00000493161 HSD17B4P51659 736 aa15.97■□□□□ 0.15
SAMM50-204ENST00000493161 MKRN4PQ13434 485 aaPredicted RBP15.97■□□□□ 0.15
SAMM50-204ENST00000493161 HSDL1Q3SXM5 330 aa15.97■□□□□ 0.15
SAMM50-204ENST00000493161 MYSM1Q5VVJ2 828 aa15.97■□□□□ 0.15
SAMM50-204ENST00000493161 CWC27Q6UX04 472 aaKnown RBP15.97■□□□□ 0.15
SAMM50-204ENST00000493161 KATNAL1Q9BW62 490 aa15.97■□□□□ 0.15
SAMM50-204ENST00000493161 UBE2ZQ9H832 354 aaPredicted RBP15.97■□□□□ 0.15
SAMM50-204ENST00000493161 SIP14410 1827 aa15.96■□□□□ 0.15
SAMM50-204ENST00000493161 MYH7BA7E2Y1 1941 aa15.96■□□□□ 0.15
SAMM50-204ENST00000493161 LGR5O75473 907 aa15.96■□□□□ 0.15
SAMM50-204ENST00000493161 SLC35G1Q2M3R5 365 aa15.96■□□□□ 0.15
SAMM50-204ENST00000493161 CELF3Q5SZQ8 465 aaKnown RBP15.96■□□□□ 0.15
SAMM50-204ENST00000493161 B4GALNT3Q6L9W6 998 aa15.96■□□□□ 0.15
SAMM50-204ENST00000493161 DBF4BQ8NFT6 615 aa15.96■□□□□ 0.15
SAMM50-204ENST00000493161 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.96■□□□□ 0.15
SAMM50-204ENST00000493161 SPATA33Q96N06 139 aa15.96■□□□□ 0.15
SAMM50-204ENST00000493161 PDCD2LQ9BRP1 358 aa15.96■□□□□ 0.15
SAMM50-204ENST00000493161 C16orf70Q9BSU1 422 aa15.96■□□□□ 0.15
SAMM50-204ENST00000493161 PI4K2BG5E9Z4 385 aa15.95■□□□□ 0.14
SAMM50-204ENST00000493161 PPFIA4O75335 1185 aa15.95■□□□□ 0.14
SAMM50-204ENST00000493161 GGPS1O95749 300 aa15.95■□□□□ 0.14
SAMM50-204ENST00000493161 KCNA5P22460 613 aa15.95■□□□□ 0.14
SAMM50-204ENST00000493161 THPOP40225 353 aa15.95■□□□□ 0.14
SAMM50-204ENST00000493161 MFAP1P55081 439 aaKnown RBP15.95■□□□□ 0.14
SAMM50-204ENST00000493161 PGM5Q15124 567 aa15.95■□□□□ 0.14
SAMM50-204ENST00000493161 CCDC178Q5BJE1 867 aa15.95■□□□□ 0.14
SAMM50-204ENST00000493161 SERINC5Q86VE9 423 aa15.95■□□□□ 0.14
SAMM50-204ENST00000493161 PLEKHM2Q8IWE5 1019 aa15.95■□□□□ 0.14
SAMM50-204ENST00000493161 AMNQ9BXJ7 453 aa15.95■□□□□ 0.14
SAMM50-204ENST00000493161 MYH6P13533 1939 aa15.94■□□□□ 0.14
SAMM50-204ENST00000493161 BRWD1Q9NSI6 2320 aa15.94■□□□□ 0.14
SAMM50-204ENST00000493161 RSPH10B2B2RC85 870 aa15.94■□□□□ 0.14
SAMM50-204ENST00000493161 GPR37L1O60883 481 aa15.94■□□□□ 0.14
SAMM50-204ENST00000493161 EFCAB14O75071 495 aa15.94■□□□□ 0.14
SAMM50-204ENST00000493161 RSPH10BP0C881 870 aa15.94■□□□□ 0.14
SAMM50-204ENST00000493161 IL9P15248 144 aa15.94■□□□□ 0.14
SAMM50-204ENST00000493161 UBA1P22314 1058 aaKnown RBP15.94■□□□□ 0.14
SAMM50-204ENST00000493161 HTRA4P83105 476 aaPredicted RBP15.94■□□□□ 0.14
SAMM50-204ENST00000493161 GHRHRQ02643 423 aa15.94■□□□□ 0.14
SAMM50-204ENST00000493161 LEXMQ3ZCV2 418 aa15.94■□□□□ 0.14
SAMM50-204ENST00000493161 STOX1Q6ZVD7 989 aa15.94■□□□□ 0.14
SAMM50-204ENST00000493161 VSIG10LQ86VR7 867 aa15.94■□□□□ 0.14
SAMM50-204ENST00000493161 MYOCDQ8IZQ8 938 aa15.94■□□□□ 0.14
SAMM50-204ENST00000493161 FBXO22Q8NEZ5 403 aa15.94■□□□□ 0.14
SAMM50-204ENST00000493161 MTMR8Q96EF0 704 aa15.94■□□□□ 0.14
SAMM50-204ENST00000493161 IL25Q9H293 177 aa15.94■□□□□ 0.14
SAMM50-204ENST00000493161 MAD2L2Q9UI95 211 aa15.94■□□□□ 0.14
SAMM50-204ENST00000493161 HCN4Q9Y3Q4 1203 aa15.94■□□□□ 0.14
SAMM50-204ENST00000493161 INSL6Q9Y581 213 aa15.94■□□□□ 0.14
SAMM50-204ENST00000493161 KLRF2D3W0D1 207 aa15.93■□□□□ 0.14
SAMM50-204ENST00000493161 PLEKHG4Q58EX7 1191 aa15.93■□□□□ 0.14
SAMM50-204ENST00000493161 CYB5R4Q7L1T6 521 aa15.93■□□□□ 0.14
SAMM50-204ENST00000493161 FAM178BQ8IXR5 827 aa15.93■□□□□ 0.14
SAMM50-204ENST00000493161 SP7Q8TDD2 431 aaPredicted RBP15.93■□□□□ 0.14
SAMM50-204ENST00000493161 TELO2Q9Y4R8 837 aa15.93■□□□□ 0.14
SAMM50-204ENST00000493161 PCDHA1Q9Y5I3 950 aa15.93■□□□□ 0.14
SAMM50-204ENST00000493161 ZBTB5O15062 677 aa15.92■□□□□ 0.14
SAMM50-204ENST00000493161 TREHO43280 583 aa15.92■□□□□ 0.14
SAMM50-204ENST00000493161 AMHP03971 560 aa15.92■□□□□ 0.14
SAMM50-204ENST00000493161 SEC23AQ15436 765 aa15.92■□□□□ 0.14
SAMM50-204ENST00000493161 EPC2Q52LR7 807 aa15.92■□□□□ 0.14
SAMM50-204ENST00000493161 IFIT1BQ5T764 474 aaKnown RBP15.92■□□□□ 0.14
SAMM50-204ENST00000493161 SMC5Q8IY18 1101 aa15.92■□□□□ 0.14
SAMM50-204ENST00000493161 GJD3Q8N144 294 aa15.92■□□□□ 0.14
SAMM50-204ENST00000493161 ATP6V0A1Q93050 837 aa15.92■□□□□ 0.14
SAMM50-204ENST00000493161 DSCC1Q9BVC3 393 aa15.92■□□□□ 0.14
SAMM50-204ENST00000493161 DIAPH3Q9NSV4 1193 aa15.92■□□□□ 0.14
SAMM50-204ENST00000493161 ARIH1Q9Y4X5 557 aaPredicted RBP15.92■□□□□ 0.14
SAMM50-204ENST00000493161 EMSYQ7Z589 1322 aa15.92■□□□□ 0.14
SAMM50-204ENST00000493161 MICAL3Q7RTP6 2002 aa15.91■□□□□ 0.14
SAMM50-204ENST00000493161 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.91■□□□□ 0.14
SAMM50-204ENST00000493161 C17orf102A2RUQ5 167 aa15.91■□□□□ 0.14
SAMM50-204ENST00000493161 PALM3A6NDB9 673 aaPredicted RBP15.91■□□□□ 0.14
SAMM50-204ENST00000493161 H3BQ06 376 aaPredicted RBP15.91■□□□□ 0.14
SAMM50-204ENST00000493161 H3BRB1 525 aa15.91■□□□□ 0.14
SAMM50-204ENST00000493161 UPP2O95045 317 aa15.91■□□□□ 0.14
SAMM50-204ENST00000493161 IGHDP01880 384 aa15.91■□□□□ 0.14
SAMM50-204ENST00000493161 CTSHP09668 335 aa15.91■□□□□ 0.14
SAMM50-204ENST00000493161 SMIM10L2AP0DMW4 78 aa15.91■□□□□ 0.14
SAMM50-204ENST00000493161 SMIM10L2BP0DMW5 78 aa15.91■□□□□ 0.14
SAMM50-204ENST00000493161 HOXC8P31273 242 aa15.91■□□□□ 0.14
SAMM50-204ENST00000493161 IMMTQ16891 758 aaKnown RBP15.91■□□□□ 0.14
SAMM50-204ENST00000493161 PTCRAQ6ISU1 281 aaPredicted RBP15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms