RNA–Protein interactions for RNA: ENST00000492909.1

PDZRN3-210, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best)

Gene PDZRN3, Length 1,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-210ENST00000492909 DNERQ8NFT8 737 aa15.87■□□□□ 0.13
PDZRN3-210ENST00000492909 CCSER1Q9C0I3 900 aa15.87■□□□□ 0.13
PDZRN3-210ENST00000492909 R3HDMLQ9H3Y0 253 aa15.87■□□□□ 0.13
PDZRN3-210ENST00000492909 WBP1LQ9NX94 342 aa15.87■□□□□ 0.13
PDZRN3-210ENST00000492909 RNF186Q9NXI6 227 aa15.87■□□□□ 0.13
PDZRN3-210ENST00000492909 MORF4L1Q9UBU8 362 aa15.87■□□□□ 0.13
PDZRN3-210ENST00000492909 LRWD1Q9UFC0 647 aa15.87■□□□□ 0.13
PDZRN3-210ENST00000492909 PP2D1A8MPX8 630 aa15.87■□□□□ 0.13
PDZRN3-210ENST00000492909 MYCLP12524 364 aaPredicted RBP15.87■□□□□ 0.13
PDZRN3-210ENST00000492909 MRPS9P82933 396 aaKnown RBP15.87■□□□□ 0.13
PDZRN3-210ENST00000492909 MAP2K1Q02750 393 aaPredicted RBP15.87■□□□□ 0.13
PDZRN3-210ENST00000492909 WDR78Q5VTH9 848 aa15.87■□□□□ 0.13
PDZRN3-210ENST00000492909 KRBA2Q6ZNG9 492 aa15.87■□□□□ 0.13
PDZRN3-210ENST00000492909 NIPA1Q7RTP0 329 aa15.87■□□□□ 0.13
PDZRN3-210ENST00000492909 CNNM3Q8NE01 707 aa15.87■□□□□ 0.13
PDZRN3-210ENST00000492909 GJA10Q969M2 543 aa15.87■□□□□ 0.13
PDZRN3-210ENST00000492909 TSPY26PQ9H489 355 aa15.87■□□□□ 0.13
PDZRN3-210ENST00000492909 A0A087X0B3 334 aa15.86■□□□□ 0.13
PDZRN3-210ENST00000492909 POTEMA6NI47 508 aa15.86■□□□□ 0.13
PDZRN3-210ENST00000492909 TBC1D8O95759 1140 aa15.86■□□□□ 0.13
PDZRN3-210ENST00000492909 NR3C2P08235 984 aa15.86■□□□□ 0.13
PDZRN3-210ENST00000492909 BCRP11274 1271 aa15.86■□□□□ 0.13
PDZRN3-210ENST00000492909 ITGB5P18084 799 aa15.86■□□□□ 0.13
PDZRN3-210ENST00000492909 CCND2P30279 289 aa15.86■□□□□ 0.13
PDZRN3-210ENST00000492909 KCTD2Q14681 263 aa15.86■□□□□ 0.13
PDZRN3-210ENST00000492909 LONRF3Q496Y0 759 aa15.86■□□□□ 0.13
PDZRN3-210ENST00000492909 RBM43Q6ZSC3 357 aaKnown RBP15.86■□□□□ 0.13
PDZRN3-210ENST00000492909 RASSF8Q8NHQ8 419 aa15.86■□□□□ 0.13
PDZRN3-210ENST00000492909 ZFP91Q96JP5 570 aaPredicted RBP15.86■□□□□ 0.13
PDZRN3-210ENST00000492909 UIMC1Q96RL1 719 aa15.86■□□□□ 0.13
PDZRN3-210ENST00000492909 PORCNQ9H237 461 aa15.86■□□□□ 0.13
PDZRN3-210ENST00000492909 CCDC39Q9UFE4 941 aa15.86■□□□□ 0.13
PDZRN3-210ENST00000492909 UBIAD1Q9Y5Z9 338 aa15.86■□□□□ 0.13
PDZRN3-210ENST00000492909 KIAA1217Q5T5P2 1943 aa15.86■□□□□ 0.13
PDZRN3-210ENST00000492909 POTEB2H3BUK9 544 aa15.85■□□□□ 0.13
PDZRN3-210ENST00000492909 FCER1AP12319 257 aa15.85■□□□□ 0.13
PDZRN3-210ENST00000492909 CNTN2Q02246 1040 aa15.85■□□□□ 0.13
PDZRN3-210ENST00000492909 FAM110CQ1W6H9 321 aa15.85■□□□□ 0.13
PDZRN3-210ENST00000492909 CABP7Q86V35 215 aa15.85■□□□□ 0.13
PDZRN3-210ENST00000492909 VSIG10LQ86VR7 867 aa15.85■□□□□ 0.13
PDZRN3-210ENST00000492909 CKAP2LQ8IYA6 745 aa15.85■□□□□ 0.13
PDZRN3-210ENST00000492909 REM2Q8IYK8 340 aaPredicted RBP15.85■□□□□ 0.13
PDZRN3-210ENST00000492909 IQUBQ8NA54 791 aa15.85■□□□□ 0.13
PDZRN3-210ENST00000492909 DHX58Q96C10 678 aa15.85■□□□□ 0.13
PDZRN3-210ENST00000492909 CCDC34Q96HJ3 373 aa15.85■□□□□ 0.13
PDZRN3-210ENST00000492909 IWS1Q96ST2 819 aa15.85■□□□□ 0.13
PDZRN3-210ENST00000492909 MMP19Q99542 508 aa15.85■□□□□ 0.13
PDZRN3-210ENST00000492909 ADD3Q9UEY8 706 aaKnown RBP15.85■□□□□ 0.13
PDZRN3-210ENST00000492909 USP25Q9UHP3 1055 aa15.85■□□□□ 0.13
PDZRN3-210ENST00000492909 PLXNB2O15031 1838 aa15.85■□□□□ 0.13
PDZRN3-210ENST00000492909 HSPA1AP0DMV8 641 aaKnown RBP15.85■□□□□ 0.13
PDZRN3-210ENST00000492909 HSPA1BP0DMV9 641 aaKnown RBP15.85■□□□□ 0.13
PDZRN3-210ENST00000492909 ARP10275 920 aa15.85■□□□□ 0.13
PDZRN3-210ENST00000492909 MTMR1Q13613 665 aa15.85■□□□□ 0.13
PDZRN3-210ENST00000492909 KARSQ15046 597 aaKnown RBP15.85■□□□□ 0.13
PDZRN3-210ENST00000492909 TAF1CQ15572 869 aaPredicted RBP15.85■□□□□ 0.13
PDZRN3-210ENST00000492909 KANK3Q6NY19 840 aa15.85■□□□□ 0.13
PDZRN3-210ENST00000492909 ELOA2Q8IYF1 753 aaPredicted RBP15.85■□□□□ 0.13
PDZRN3-210ENST00000492909 SLC5A5Q92911 643 aa15.85■□□□□ 0.13
PDZRN3-210ENST00000492909 ZNF577Q9BSK1 485 aa15.85■□□□□ 0.13
PDZRN3-210ENST00000492909 BEGAINQ9BUH8 593 aa15.85■□□□□ 0.13
PDZRN3-210ENST00000492909 WDR11Q9BZH6 1224 aa15.85■□□□□ 0.13
PDZRN3-210ENST00000492909 EFCC1Q9HA90 598 aa15.85■□□□□ 0.13
PDZRN3-210ENST00000492909 JADE2Q9NQC1 790 aa15.85■□□□□ 0.13
PDZRN3-210ENST00000492909 DISC1Q9NRI5 854 aa15.85■□□□□ 0.13
PDZRN3-210ENST00000492909 KCNH7Q9NS40 1196 aa15.85■□□□□ 0.13
PDZRN3-210ENST00000492909 SERTAD1Q9UHV2 236 aa15.85■□□□□ 0.13
PDZRN3-210ENST00000492909 HOOK1Q9UJC3 728 aaKnown RBP15.85■□□□□ 0.13
PDZRN3-210ENST00000492909 ACTN4O43707 911 aaKnown RBP15.84■□□□□ 0.13
PDZRN3-210ENST00000492909 STAM2O75886 525 aa15.84■□□□□ 0.13
PDZRN3-210ENST00000492909 SLFN14P0C7P3 912 aa15.84■□□□□ 0.13
PDZRN3-210ENST00000492909 CRHR2Q13324 411 aa15.84■□□□□ 0.13
PDZRN3-210ENST00000492909 E2F4Q16254 413 aa15.84■□□□□ 0.13
PDZRN3-210ENST00000492909 LRCH2Q5VUJ6 765 aa15.84■□□□□ 0.13
PDZRN3-210ENST00000492909 KRT79Q5XKE5 535 aa15.84■□□□□ 0.13
PDZRN3-210ENST00000492909 CEP57L1Q8IYX8 460 aa15.84■□□□□ 0.13
PDZRN3-210ENST00000492909 FAM133AQ8N9E0 248 aa15.84■□□□□ 0.13
PDZRN3-210ENST00000492909 CALML4Q96GE6 196 aa15.84■□□□□ 0.13
PDZRN3-210ENST00000492909 NAP1L5Q96NT1 182 aaPredicted RBP15.84■□□□□ 0.13
PDZRN3-210ENST00000492909 IPO5O00410 1097 aaKnown RBP15.83■□□□□ 0.12
PDZRN3-210ENST00000492909 FOXN1O15353 648 aa15.83■□□□□ 0.12
PDZRN3-210ENST00000492909 ALDH5A1P51649 535 aaPredicted RBP15.83■□□□□ 0.12
PDZRN3-210ENST00000492909 SPIRE1Q08AE8 756 aa15.83■□□□□ 0.12
PDZRN3-210ENST00000492909 ZRSR1Q15695 479 aaKnown RBP15.83■□□□□ 0.12
PDZRN3-210ENST00000492909 RRAGBQ5VZM2 374 aa15.83■□□□□ 0.12
PDZRN3-210ENST00000492909 MMTAG2Q9BU76 263 aaKnown RBP15.83■□□□□ 0.12
PDZRN3-210ENST00000492909 ADGRA2Q96PE1 1338 aa15.83■□□□□ 0.12
PDZRN3-210ENST00000492909 PLXNA1Q9UIW2 1896 aa15.83■□□□□ 0.12
PDZRN3-210ENST00000492909 DNAJC25-GNG10A0A024R161 153 aa15.82■□□□□ 0.12
PDZRN3-210ENST00000492909 B4DLN1 442 aa15.82■□□□□ 0.12
PDZRN3-210ENST00000492909 GAS7O60861 476 aa15.82■□□□□ 0.12
PDZRN3-210ENST00000492909 PSMD10O75832 226 aa15.82■□□□□ 0.12
PDZRN3-210ENST00000492909 STAT6P42226 847 aa15.82■□□□□ 0.12
PDZRN3-210ENST00000492909 STXBP2Q15833 593 aa15.82■□□□□ 0.12
PDZRN3-210ENST00000492909 NLRX1Q86UT6 975 aa15.82■□□□□ 0.12
PDZRN3-210ENST00000492909 SNX29Q8TEQ0 813 aa15.82■□□□□ 0.12
PDZRN3-210ENST00000492909 GPRASP2Q96D09 838 aa15.82■□□□□ 0.12
PDZRN3-210ENST00000492909 CDK5RAP3Q96JB5 506 aa15.82■□□□□ 0.12
PDZRN3-210ENST00000492909 INPP4AQ96PE3 977 aaPredicted RBP15.82■□□□□ 0.12
PDZRN3-210ENST00000492909 MPHOSPH6Q99547 160 aaKnown RBP15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms