RNA–Protein interactions for RNA: ENST00000492840.1

SND1-216, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 5

Gene SND1, Length 472 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-216ENST00000492840 KIAA1211Q6ZU35 1233 aa6.55□□□□□ -1.36
SND1-216ENST00000492840 CHSY3Q70JA7 882 aa6.55□□□□□ -1.36
SND1-216ENST00000492840 PCDH19Q8TAB3 1148 aa6.55□□□□□ -1.36
SND1-216ENST00000492840 SLC5A5Q92911 643 aa6.55□□□□□ -1.36
SND1-216ENST00000492840 HSPBAP1Q96EW2 488 aa6.55□□□□□ -1.36
SND1-216ENST00000492840 LRGUKQ96M69 825 aa6.55□□□□□ -1.36
SND1-216ENST00000492840 NUP88Q99567 741 aaPredicted RBP6.55□□□□□ -1.36
SND1-216ENST00000492840 RNF208Q9H0X6 261 aa6.55□□□□□ -1.36
SND1-216ENST00000492840 PPCSQ9HAB8 311 aa6.55□□□□□ -1.36
SND1-216ENST00000492840 GPR27Q9NS67 375 aa6.55□□□□□ -1.36
SND1-216ENST00000492840 FAM105AQ9NUU6 356 aa6.55□□□□□ -1.36
SND1-216ENST00000492840 GMPR2Q9P2T1 348 aaKnown RBP6.55□□□□□ -1.36
SND1-216ENST00000492840 PCOLCE2Q9UKZ9 415 aa6.55□□□□□ -1.36
SND1-216ENST00000492840 ACTL7BQ9Y614 415 aa6.55□□□□□ -1.36
SND1-216ENST00000492840 IQGAP1P46940 1657 aa6.55□□□□□ -1.36
SND1-216ENST00000492840 FRMPD2Q68DX3 1309 aaPredicted RBP6.54□□□□□ -1.36
SND1-216ENST00000492840 NPHP4O75161 1426 aaPredicted RBP6.54□□□□□ -1.36
SND1-216ENST00000492840 FAM135BQ49AJ0 1406 aa6.54□□□□□ -1.36
SND1-216ENST00000492840 ARNTLO00327 626 aa6.54□□□□□ -1.36
SND1-216ENST00000492840 MEFVO15553 781 aaPredicted RBP6.54□□□□□ -1.36
SND1-216ENST00000492840 PCDHGA12O60330 932 aa6.54□□□□□ -1.36
SND1-216ENST00000492840 MSCO60682 206 aa6.54□□□□□ -1.36
SND1-216ENST00000492840 SLITRK5O94991 958 aa6.54□□□□□ -1.36
SND1-216ENST00000492840 CFBP00751 764 aa6.54□□□□□ -1.36
SND1-216ENST00000492840 SOD2P04179 222 aa6.54□□□□□ -1.36
SND1-216ENST00000492840 SRGAP2CP0DJJ0 459 aa6.54□□□□□ -1.36
SND1-216ENST00000492840 YBX3P16989 372 aaKnown RBP eCLIP6.54□□□□□ -1.36
SND1-216ENST00000492840 SERPINB3P29508 390 aa6.54□□□□□ -1.36
SND1-216ENST00000492840 COL9A3Q14050 684 aaPredicted RBP6.54□□□□□ -1.36
SND1-216ENST00000492840 SAFBQ15424 915 aaKnown RBP eCLIP6.54□□□□□ -1.365e-7■□□□□ 9.9
SND1-216ENST00000492840 DDB1Q16531 1140 aa6.54□□□□□ -1.36
SND1-216ENST00000492840 FAM83BQ5T0W9 1011 aa6.54□□□□□ -1.36
SND1-216ENST00000492840 GPR158Q5T848 1215 aa6.54□□□□□ -1.36
SND1-216ENST00000492840 EFCAB2Q5VUJ9 269 aa6.54□□□□□ -1.36
SND1-216ENST00000492840 PGM2L1Q6PCE3 622 aa6.54□□□□□ -1.36
SND1-216ENST00000492840 OVCH1Q7RTY7 1134 aa6.54□□□□□ -1.36
SND1-216ENST00000492840 TMC3Q7Z5M5 1100 aa6.54□□□□□ -1.36
SND1-216ENST00000492840 DTWD1Q8N5C7 304 aa6.54□□□□□ -1.36
SND1-216ENST00000492840 C2CD4AQ8NCU7 369 aaPredicted RBP6.54□□□□□ -1.36
SND1-216ENST00000492840 UBE2Q2Q8WVN8 375 aa6.54□□□□□ -1.36
SND1-216ENST00000492840 TTC17Q96AE7 1141 aa6.54□□□□□ -1.36
SND1-216ENST00000492840 RUNDC1Q96C34 613 aa6.54□□□□□ -1.36
SND1-216ENST00000492840 ELAC2Q9BQ52 826 aaKnown RBP6.54□□□□□ -1.36
SND1-216ENST00000492840 H2AFY2Q9P0M6 372 aaPredicted RBP6.54□□□□□ -1.36
SND1-216ENST00000492840 TMEFF2Q9UIK5 374 aaPredicted RBP6.54□□□□□ -1.36
SND1-216ENST00000492840 RNF112Q9ULX5 631 aa6.54□□□□□ -1.36
SND1-216ENST00000492840 FAM50BQ9Y247 325 aa6.54□□□□□ -1.36
SND1-216ENST00000492840 PCDHGA9Q9Y5G4 932 aaKnown RBP6.54□□□□□ -1.36
SND1-216ENST00000492840 PCDHGA8Q9Y5G5 932 aa6.54□□□□□ -1.36
SND1-216ENST00000492840 PCDHGA7Q9Y5G6 932 aa6.54□□□□□ -1.36
SND1-216ENST00000492840 PCDHGA6Q9Y5G7 932 aa6.54□□□□□ -1.36
SND1-216ENST00000492840 PCDHGA3Q9Y5H0 932 aa6.54□□□□□ -1.36
SND1-216ENST00000492840 PCDHGA2Q9Y5H1 932 aa6.54□□□□□ -1.36
SND1-216ENST00000492840 MED14O60244 1454 aa6.53□□□□□ -1.36
SND1-216ENST00000492840 ITSN2Q9NZM3 1697 aa6.53□□□□□ -1.36
SND1-216ENST00000492840 PTPDC1A2A3K4 754 aa6.53□□□□□ -1.36
SND1-216ENST00000492840 RASSF10A6NK89 507 aa6.53□□□□□ -1.36
SND1-216ENST00000492840 SIGLEC6O43699 453 aa6.53□□□□□ -1.36
SND1-216ENST00000492840 LRRN2O75325 713 aa6.53□□□□□ -1.36
SND1-216ENST00000492840 CENPBP07199 599 aaPredicted RBP6.53□□□□□ -1.36
SND1-216ENST00000492840 LTBRP36941 435 aa6.53□□□□□ -1.36
SND1-216ENST00000492840 ZNF280AP59817 542 aaPredicted RBP6.53□□□□□ -1.36
SND1-216ENST00000492840 POU4F1Q01851 419 aa6.53□□□□□ -1.36
SND1-216ENST00000492840 POU5F1BQ06416 359 aa6.53□□□□□ -1.36
SND1-216ENST00000492840 PAK1Q13153 545 aa6.53□□□□□ -1.36
SND1-216ENST00000492840 TMEM95Q3KNT9 176 aa6.53□□□□□ -1.36
SND1-216ENST00000492840 LBX2Q6XYB7 198 aa6.53□□□□□ -1.36
SND1-216ENST00000492840 ACAD11Q709F0 780 aa6.53□□□□□ -1.36
SND1-216ENST00000492840 CCDC103Q8IW40 242 aa6.53□□□□□ -1.36
SND1-216ENST00000492840 ALG1Q9BT22 464 aa6.53□□□□□ -1.36
SND1-216ENST00000492840 LDHAL6BQ9BYZ2 381 aaPredicted RBP6.53□□□□□ -1.36
SND1-216ENST00000492840 GPRC5CQ9NQ84 441 aa6.53□□□□□ -1.36
SND1-216ENST00000492840 DDX21Q9NR30 783 aaKnown RBP eCLIP6.53□□□□□ -1.363e-11■■□□□ 13.7
SND1-216ENST00000492840 ATG3Q9NT62 314 aa6.53□□□□□ -1.36
SND1-216ENST00000492840 OXSMQ9NWU1 459 aa6.53□□□□□ -1.36
SND1-216ENST00000492840 MKS1Q9NXB0 559 aa6.53□□□□□ -1.36
SND1-216ENST00000492840 BACE2Q9Y5Z0 518 aa6.53□□□□□ -1.36
SND1-216ENST00000492840 ARHGAP5Q13017 1502 aa6.53□□□□□ -1.36
SND1-216ENST00000492840 KIDINS220Q9ULH0 1771 aa6.53□□□□□ -1.36
SND1-216ENST00000492840 SETBP1Q9Y6X0 1596 aa6.52□□□□□ -1.36
SND1-216ENST00000492840 ROBO1Q9Y6N7 1651 aa6.52□□□□□ -1.37
SND1-216ENST00000492840 TRIM75PA6NK02 468 aa6.52□□□□□ -1.37
SND1-216ENST00000492840 RBAK-RBAKDNI3L0D1 243 aa6.52□□□□□ -1.37
SND1-216ENST00000492840 AURKAO14965 403 aa6.52□□□□□ -1.37
SND1-216ENST00000492840 TGM5O43548 720 aa6.52□□□□□ -1.37
SND1-216ENST00000492840 TCEA3O75764 348 aa6.52□□□□□ -1.37
SND1-216ENST00000492840 PRAMEF1O95521 474 aa6.52□□□□□ -1.37
SND1-216ENST00000492840 IL33O95760 270 aa6.52□□□□□ -1.37
SND1-216ENST00000492840 CD3EP07766 207 aa6.52□□□□□ -1.37
SND1-216ENST00000492840 VCAM1P19320 739 aa6.52□□□□□ -1.37
SND1-216ENST00000492840 IRX6P78412 446 aaPredicted RBP6.52□□□□□ -1.37
SND1-216ENST00000492840 HTRA3P83110 453 aa6.52□□□□□ -1.37
SND1-216ENST00000492840 LRRC32Q14392 662 aa6.52□□□□□ -1.37
SND1-216ENST00000492840 E4F1Q66K89 784 aaPredicted RBP6.52□□□□□ -1.37
SND1-216ENST00000492840 ZNF772Q68DY9 489 aaPredicted RBP6.52□□□□□ -1.37
SND1-216ENST00000492840 GPR161Q8N6U8 529 aaKnown RBP6.52□□□□□ -1.37
SND1-216ENST00000492840 EFHBQ8N7U6 833 aa6.52□□□□□ -1.37
SND1-216ENST00000492840 NMRK2Q9NPI5 230 aa6.52□□□□□ -1.37
SND1-216ENST00000492840 MAN1C1Q9NR34 630 aa6.52□□□□□ -1.37
SND1-216ENST00000492840 CHST7Q9NS84 486 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms