RNA–Protein interactions for RNA: ENST00000492506.1

HDAC3-213, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 830 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-213ENST00000492506 MAF1Q9H063 256 aa15.33■□□□□ 0.04
HDAC3-213ENST00000492506 CPVLQ9H3G5 476 aa15.33■□□□□ 0.04
HDAC3-213ENST00000492506 DDX41Q9UJV9 622 aaKnown RBP15.33■□□□□ 0.04
HDAC3-213ENST00000492506 LAMA4Q16363 1823 aa15.32■□□□□ 0.04
HDAC3-213ENST00000492506 POTEB3A0JP26 581 aa15.32■□□□□ 0.04
HDAC3-213ENST00000492506 F2P00734 622 aa15.32■□□□□ 0.04
HDAC3-213ENST00000492506 GOLGA8HP0CJ92 632 aa15.32■□□□□ 0.04
HDAC3-213ENST00000492506 MX1P20591 662 aa15.32■□□□□ 0.04
HDAC3-213ENST00000492506 ZNF200P98182 395 aaPredicted RBP15.32■□□□□ 0.04
HDAC3-213ENST00000492506 DGKDQ16760 1214 aa15.32■□□□□ 0.04
HDAC3-213ENST00000492506 POTEBQ6S5H4 581 aa15.32■□□□□ 0.04
HDAC3-213ENST00000492506 C7orf31Q8N865 590 aa15.32■□□□□ 0.04
HDAC3-213ENST00000492506 NSUN6Q8TEA1 469 aaKnown RBP15.32■□□□□ 0.04
HDAC3-213ENST00000492506 TOMM22Q9NS69 142 aa15.32■□□□□ 0.04
HDAC3-213ENST00000492506 INSL6Q9Y581 213 aa15.32■□□□□ 0.04
HDAC3-213ENST00000492506 COL4A6Q14031 1691 aa15.32■□□□□ 0.04
HDAC3-213ENST00000492506 GOLGA6L3A6NEY3 463 aa15.31■□□□□ 0.04
HDAC3-213ENST00000492506 LGR5O75473 907 aa15.31■□□□□ 0.04
HDAC3-213ENST00000492506 ZNF286BP0CG31 522 aa15.31■□□□□ 0.04
HDAC3-213ENST00000492506 HOXD8P13378 290 aaPredicted RBP15.31■□□□□ 0.04
HDAC3-213ENST00000492506 ALADP13716 330 aa15.31■□□□□ 0.04
HDAC3-213ENST00000492506 MFSD10Q14728 455 aa15.31■□□□□ 0.04
HDAC3-213ENST00000492506 COL19A1Q14993 1142 aa15.31■□□□□ 0.04
HDAC3-213ENST00000492506 KIAA0753Q2KHM9 967 aa15.31■□□□□ 0.04
HDAC3-213ENST00000492506 FBXO22Q8NEZ5 403 aa15.31■□□□□ 0.04
HDAC3-213ENST00000492506 MRPL38Q96DV4 380 aaKnown RBP15.31■□□□□ 0.04
HDAC3-213ENST00000492506 IWS1Q96ST2 819 aa15.31■□□□□ 0.04
HDAC3-213ENST00000492506 ALG1Q9BT22 464 aa15.31■□□□□ 0.04
HDAC3-213ENST00000492506 UBA5Q9GZZ9 404 aa15.31■□□□□ 0.04
HDAC3-213ENST00000492506 HELLSQ9NRZ9 838 aa15.31■□□□□ 0.04
HDAC3-213ENST00000492506 PCDHB15Q9Y5E8 787 aa15.31■□□□□ 0.04
HDAC3-213ENST00000492506 ZMYM6O95789 1325 aa15.31■□□□□ 0.04
HDAC3-213ENST00000492506 USP34Q70CQ2 3546 aa15.31■□□□□ 0.04
HDAC3-213ENST00000492506 A0A0D9SFI3 127 aa15.3■□□□□ 0.04
HDAC3-213ENST00000492506 ABCB11O95342 1321 aa15.3■□□□□ 0.04
HDAC3-213ENST00000492506 HSPD1P10809 573 aaKnown RBP15.3■□□□□ 0.04
HDAC3-213ENST00000492506 SSTR3P32745 418 aaPredicted RBP15.3■□□□□ 0.04
HDAC3-213ENST00000492506 STXBP2Q15833 593 aa15.3■□□□□ 0.04
HDAC3-213ENST00000492506 CDC37Q16543 378 aaPredicted RBP15.3■□□□□ 0.04
HDAC3-213ENST00000492506 GPATCH4Q5T3I0 446 aaKnown RBP15.3■□□□□ 0.04
HDAC3-213ENST00000492506 DBF4BQ8NFT6 615 aa15.3■□□□□ 0.04
HDAC3-213ENST00000492506 PPTC7Q8NI37 304 aa15.3■□□□□ 0.04
HDAC3-213ENST00000492506 EXOC6Q8TAG9 804 aa15.3■□□□□ 0.04
HDAC3-213ENST00000492506 FAM227BQ96M60 508 aa15.3■□□□□ 0.04
HDAC3-213ENST00000492506 RMDN3Q96TC7 470 aa15.3■□□□□ 0.04
HDAC3-213ENST00000492506 KATNAL1Q9BW62 490 aa15.3■□□□□ 0.04
HDAC3-213ENST00000492506 DOCK5Q9H7D0 1870 aa15.29■□□□□ 0.04
HDAC3-213ENST00000492506 H3BQ06 376 aaPredicted RBP15.29■□□□□ 0.04
HDAC3-213ENST00000492506 EIF3JO75822 258 aaKnown RBP15.29■□□□□ 0.04
HDAC3-213ENST00000492506 RGS20O76081 388 aa15.29■□□□□ 0.04
HDAC3-213ENST00000492506 HAND2P61296 217 aa15.29■□□□□ 0.04
HDAC3-213ENST00000492506 LAMC2Q13753 1193 aa15.29■□□□□ 0.04
HDAC3-213ENST00000492506 PUS10Q3MIT2 529 aaKnown RBP15.29■□□□□ 0.04
HDAC3-213ENST00000492506 EPC2Q52LR7 807 aa15.29■□□□□ 0.04
HDAC3-213ENST00000492506 TBC1D10CQ8IV04 446 aa15.29■□□□□ 0.04
HDAC3-213ENST00000492506 EVI5LQ96CN4 794 aa15.29■□□□□ 0.04
HDAC3-213ENST00000492506 EMSYQ7Z589 1322 aa15.28■□□□□ 0.04
HDAC3-213ENST00000492506 FSD2A1L4K1 749 aa15.28■□□□□ 0.04
HDAC3-213ENST00000492506 C19orf67A6NJJ6 358 aa15.28■□□□□ 0.04
HDAC3-213ENST00000492506 H3BNC9 293 aa15.28■□□□□ 0.04
HDAC3-213ENST00000492506 DCXO43602 365 aa15.28■□□□□ 0.04
HDAC3-213ENST00000492506 AMHP03971 560 aa15.28■□□□□ 0.04
HDAC3-213ENST00000492506 MRE11P49959 708 aa15.28■□□□□ 0.04
HDAC3-213ENST00000492506 NHLH1Q02575 133 aa15.28■□□□□ 0.04
HDAC3-213ENST00000492506 MCMDC2Q4G0Z9 681 aa15.28■□□□□ 0.04
HDAC3-213ENST00000492506 PLEKHG4Q58EX7 1191 aa15.28■□□□□ 0.04
HDAC3-213ENST00000492506 ZNF589Q86UQ0 364 aaPredicted RBP15.28■□□□□ 0.04
HDAC3-213ENST00000492506 SERINC5Q86VE9 423 aa15.28■□□□□ 0.04
HDAC3-213ENST00000492506 ADGRF4Q8IZF3 695 aa15.28■□□□□ 0.04
HDAC3-213ENST00000492506 MYOCDQ8IZQ8 938 aa15.28■□□□□ 0.04
HDAC3-213ENST00000492506 CRBNQ96SW2 442 aa15.28■□□□□ 0.04
HDAC3-213ENST00000492506 OSBPL7Q9BZF2 842 aa15.28■□□□□ 0.04
HDAC3-213ENST00000492506 PXMP2Q9NR77 195 aa15.28■□□□□ 0.04
HDAC3-213ENST00000492506 CTNNA3Q9UI47 895 aa15.28■□□□□ 0.04
HDAC3-213ENST00000492506 OPLAHO14841 1288 aa15.27■□□□□ 0.04
HDAC3-213ENST00000492506 PPFIA4O75335 1185 aa15.27■□□□□ 0.04
HDAC3-213ENST00000492506 NR3C2P08235 984 aa15.27■□□□□ 0.04
HDAC3-213ENST00000492506 PCP11498 1178 aaKnown RBP15.27■□□□□ 0.04
HDAC3-213ENST00000492506 EIF2AK2P19525 551 aaKnown RBP15.27■□□□□ 0.04
HDAC3-213ENST00000492506 PTMSP20962 102 aa15.27■□□□□ 0.04
HDAC3-213ENST00000492506 HOXC8P31273 242 aa15.27■□□□□ 0.04
HDAC3-213ENST00000492506 ZP2Q05996 745 aa15.27■□□□□ 0.04
HDAC3-213ENST00000492506 QRICH1Q2TAL8 776 aa15.27■□□□□ 0.04
HDAC3-213ENST00000492506 HSDL1Q3SXM5 330 aa15.27■□□□□ 0.04
HDAC3-213ENST00000492506 TCEAL5Q5H9L2 206 aa15.27■□□□□ 0.04
HDAC3-213ENST00000492506 MYSM1Q5VVJ2 828 aa15.27■□□□□ 0.04
HDAC3-213ENST00000492506 MFSD6Q6ZSS7 791 aa15.27■□□□□ 0.04
HDAC3-213ENST00000492506 DGKHQ86XP1 1220 aa15.27■□□□□ 0.04
HDAC3-213ENST00000492506 BANK1Q8NDB2 785 aa15.27■□□□□ 0.04
HDAC3-213ENST00000492506 TOP1MTQ969P6 601 aa15.27■□□□□ 0.04
HDAC3-213ENST00000492506 PABPC5Q96DU9 382 aaKnown RBP15.27■□□□□ 0.04
HDAC3-213ENST00000492506 SAMD11Q96NU1 681 aa15.27■□□□□ 0.04
HDAC3-213ENST00000492506 UIMC1Q96RL1 719 aa15.27■□□□□ 0.04
HDAC3-213ENST00000492506 ZKSCAN3Q9BRR0 538 aa15.27■□□□□ 0.04
HDAC3-213ENST00000492506 C16orf70Q9BSU1 422 aa15.27■□□□□ 0.04
HDAC3-213ENST00000492506 MRVI1Q9Y6F6 885 aa15.27■□□□□ 0.04
HDAC3-213ENST00000492506 TECTAO75443 2155 aa15.26■□□□□ 0.03
HDAC3-213ENST00000492506 KAT6AQ92794 2004 aa15.26■□□□□ 0.03
HDAC3-213ENST00000492506 NEDD4P46934 1319 aa15.26■□□□□ 0.03
HDAC3-213ENST00000492506 RSPH10B2B2RC85 870 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms