RNA–Protein interactions for RNA: ENST00000492270.1

UPF3A-209, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2 BASIC

Gene UPF3A, Length 494 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-209ENST00000492270 PPTC7Q8NI37 304 aa28.35■■■□□ 2.13
UPF3A-209ENST00000492270 KAT2BQ92831 832 aa28.35■■■□□ 2.13
UPF3A-209ENST00000492270 TM6SF1Q9BZW5 370 aa28.35■■■□□ 2.13
UPF3A-209ENST00000492270 TANC1Q9C0D5 1861 aa28.35■■■□□ 2.13
UPF3A-209ENST00000492270 TRIP12Q14669 1992 aaPredicted RBP28.34■■■□□ 2.13
UPF3A-209ENST00000492270 CCDC196A0A1B0GTZ2 297 aa28.34■■■□□ 2.13
UPF3A-209ENST00000492270 PDIA3P30101 505 aaKnown RBP28.34■■■□□ 2.13
UPF3A-209ENST00000492270 CYP2C18P33260 490 aa28.34■■■□□ 2.13
UPF3A-209ENST00000492270 EVCP57679 992 aa28.34■■■□□ 2.13
UPF3A-209ENST00000492270 HSDL1Q3SXM5 330 aa28.34■■■□□ 2.13
UPF3A-209ENST00000492270 MFSD5Q6N075 450 aa28.34■■■□□ 2.13
UPF3A-209ENST00000492270 PPP1R18Q6NYC8 613 aa28.34■■■□□ 2.13
UPF3A-209ENST00000492270 PHKBQ93100 1093 aa28.34■■■□□ 2.13
UPF3A-209ENST00000492270 LARP6Q9BRS8 491 aaKnown RBP28.34■■■□□ 2.13
UPF3A-209ENST00000492270 NCOA5Q9HCD5 579 aaKnown RBP28.34■■■□□ 2.13
UPF3A-209ENST00000492270 BARHL2Q9NY43 387 aa28.34■■■□□ 2.13
UPF3A-209ENST00000492270 STAM2O75886 525 aa28.33■■■□□ 2.13
UPF3A-209ENST00000492270 ZNF286BP0CG31 522 aa28.33■■■□□ 2.13
UPF3A-209ENST00000492270 TGFB3P10600 412 aa28.33■■■□□ 2.13
UPF3A-209ENST00000492270 ICAM3P32942 547 aa28.33■■■□□ 2.13
UPF3A-209ENST00000492270 CCT2P78371 535 aaKnown RBP28.33■■■□□ 2.13
UPF3A-209ENST00000492270 DGKDQ16760 1214 aa28.33■■■□□ 2.13
UPF3A-209ENST00000492270 GNPTABQ3T906 1256 aa28.33■■■□□ 2.13
UPF3A-209ENST00000492270 SPATA33Q96N06 139 aa28.33■■■□□ 2.13
UPF3A-209ENST00000492270 HIPK3Q9H422 1215 aa28.33■■■□□ 2.13
UPF3A-209ENST00000492270 RIC8AQ9NPQ8 531 aa28.33■■■□□ 2.13
UPF3A-209ENST00000492270 PCDHA6Q9UN73 950 aa28.33■■■□□ 2.13
UPF3A-209ENST00000492270 PCDHA8Q9Y5H6 950 aa28.33■■■□□ 2.13
UPF3A-209ENST00000492270 SPDYE3A6NKU9 549 aa28.32■■■□□ 2.12
UPF3A-209ENST00000492270 SPATA31C2B4DYI2 1134 aa28.32■■■□□ 2.12
UPF3A-209ENST00000492270 hCG_1984214I3L0E3 225 aa28.32■■■□□ 2.12
UPF3A-209ENST00000492270 NTRK3Q16288 839 aa28.32■■■□□ 2.12
UPF3A-209ENST00000492270 PFKFB3Q16875 520 aaPredicted RBP28.32■■■□□ 2.12
UPF3A-209ENST00000492270 NFRKBQ6P4R8 1299 aa28.32■■■□□ 2.12
UPF3A-209ENST00000492270 ZNF713Q8N859 430 aaPredicted RBP28.32■■■□□ 2.12
UPF3A-209ENST00000492270 PGBD1Q96JS3 809 aa28.32■■■□□ 2.12
UPF3A-209ENST00000492270 NOC4LQ9BVI4 516 aaKnown RBP28.32■■■□□ 2.12
UPF3A-209ENST00000492270 FIBPO43427 364 aa28.31■■■□□ 2.12
UPF3A-209ENST00000492270 CYP2C9P11712 490 aa28.31■■■□□ 2.12
UPF3A-209ENST00000492270 CSF2RAP15509 400 aa28.31■■■□□ 2.12
UPF3A-209ENST00000492270 ADCY7P51828 1080 aa28.31■■■□□ 2.12
UPF3A-209ENST00000492270 PKN1Q16512 942 aa28.31■■■□□ 2.12
UPF3A-209ENST00000492270 XRRA1Q6P2D8 792 aa28.31■■■□□ 2.12
UPF3A-209ENST00000492270 MLXIPQ9HAP2 919 aa28.31■■■□□ 2.12
UPF3A-209ENST00000492270 SMCO2A6NFE2 343 aa28.3■■■□□ 2.12
UPF3A-209ENST00000492270 HOXD8P13378 290 aaPredicted RBP28.3■■■□□ 2.12
UPF3A-209ENST00000492270 SCG2P13521 617 aa28.3■■■□□ 2.12
UPF3A-209ENST00000492270 TMEM260Q9NX78 707 aa28.3■■■□□ 2.12
UPF3A-209ENST00000492270 PRPF3O43395 683 aaKnown RBP28.29■■■□□ 2.12
UPF3A-209ENST00000492270 CCL23P55773 120 aa28.29■■■□□ 2.12
UPF3A-209ENST00000492270 CYFIP1Q7L576 1253 aa28.29■■■□□ 2.12
UPF3A-209ENST00000492270 ALG1Q9BT22 464 aa28.29■■■□□ 2.12
UPF3A-209ENST00000492270 WNT8AQ9H1J5 351 aa28.29■■■□□ 2.12
UPF3A-209ENST00000492270 PDRG1Q9NUG6 133 aa28.29■■■□□ 2.12
UPF3A-209ENST00000492270 TELO2Q9Y4R8 837 aa28.29■■■□□ 2.12
UPF3A-209ENST00000492270 ADAMTS3O15072 1205 aa28.28■■■□□ 2.12
UPF3A-209ENST00000492270 F2P00734 622 aa28.28■■■□□ 2.12
UPF3A-209ENST00000492270 ITGB5P18084 799 aa28.28■■■□□ 2.12
UPF3A-209ENST00000492270 PSEN2P49810 448 aa28.28■■■□□ 2.12
UPF3A-209ENST00000492270 PTPN11Q06124 597 aaPredicted RBP28.28■■■□□ 2.12
UPF3A-209ENST00000492270 C16orf59Q7L2K0 433 aa28.28■■■□□ 2.12
UPF3A-209ENST00000492270 NLRX1Q86UT6 975 aa28.28■■■□□ 2.12
UPF3A-209ENST00000492270 TMEM199Q8N511 208 aa28.28■■■□□ 2.12
UPF3A-209ENST00000492270 SEC24BO95487 1268 aa28.27■■■□□ 2.12
UPF3A-209ENST00000492270 SUPT20HL2P0C7V6 817 aa28.27■■■□□ 2.12
UPF3A-209ENST00000492270 ACRP10323 421 aa28.27■■■□□ 2.12
UPF3A-209ENST00000492270 IFNAR1P17181 557 aa28.27■■■□□ 2.12
UPF3A-209ENST00000492270 CLK2P49760 499 aaKnown RBP28.27■■■□□ 2.12
UPF3A-209ENST00000492270 PPIGQ13427 754 aaKnown RBP eCLIP28.27■■■□□ 2.12
UPF3A-209ENST00000492270 MFSD10Q14728 455 aa28.27■■■□□ 2.12
UPF3A-209ENST00000492270 BUD13Q9BRD0 619 aaKnown RBP eCLIP28.27■■■□□ 2.122e-6■■■■□ 23
UPF3A-209ENST00000492270 SLC26A6Q9BXS9 759 aa28.27■■■□□ 2.12
UPF3A-209ENST00000492270 ANO3Q9BYT9 981 aa28.27■■■□□ 2.12
UPF3A-209ENST00000492270 UBIAD1Q9Y5Z9 338 aa28.27■■■□□ 2.12
UPF3A-209ENST00000492270 HAS3O00219 553 aa28.26■■■□□ 2.11
UPF3A-209ENST00000492270 PPFIA4O75335 1185 aa28.26■■■□□ 2.11
UPF3A-209ENST00000492270 STK3Q13188 491 aa28.26■■■□□ 2.11
UPF3A-209ENST00000492270 NEDD9Q14511 834 aa28.26■■■□□ 2.11
UPF3A-209ENST00000492270 KIAA0753Q2KHM9 967 aa28.26■■■□□ 2.11
UPF3A-209ENST00000492270 GDF6Q6KF10 455 aaPredicted RBP28.26■■■□□ 2.11
UPF3A-209ENST00000492270 GPRASP2Q96D09 838 aa28.26■■■□□ 2.11
UPF3A-209ENST00000492270 RNPC3Q96LT9 517 aaKnown RBP28.26■■■□□ 2.11
UPF3A-209ENST00000492270 RNF26Q9BY78 433 aaPredicted RBP28.26■■■□□ 2.11
UPF3A-209ENST00000492270 EHMT1Q9H9B1 1298 aa28.26■■■□□ 2.11
UPF3A-209ENST00000492270 ATP9AO75110 1047 aa28.25■■■□□ 2.11
UPF3A-209ENST00000492270 SP4Q02446 784 aa28.25■■■□□ 2.11
UPF3A-209ENST00000492270 METTL7BQ6UX53 244 aa28.25■■■□□ 2.11
UPF3A-209ENST00000492270 ZNF274Q96GC6 653 aaPredicted RBP28.25■■■□□ 2.11
UPF3A-209ENST00000492270 SCLYQ96I15 445 aa28.25■■■□□ 2.11
UPF3A-209ENST00000492270 CTAGE1Q96RT6 745 aa28.25■■■□□ 2.11
UPF3A-209ENST00000492270 C16orf70Q9BSU1 422 aa28.25■■■□□ 2.11
UPF3A-209ENST00000492270 KATNAL1Q9BW62 490 aa28.25■■■□□ 2.11
UPF3A-209ENST00000492270 PKD2L1Q9P0L9 805 aa28.25■■■□□ 2.11
UPF3A-209ENST00000492270 HDAC6Q9UBN7 1215 aa28.25■■■□□ 2.11
UPF3A-209ENST00000492270 GBF1Q92538 1859 aa28.25■■■□□ 2.11
UPF3A-209ENST00000492270 NOP56O00567 594 aaKnown RBP28.24■■■□□ 2.11
UPF3A-209ENST00000492270 ANAPC15P60006 121 aa28.24■■■□□ 2.11
UPF3A-209ENST00000492270 AKAP17AQ02040 695 aaKnown RBP28.24■■■□□ 2.11
UPF3A-209ENST00000492270 PTGISQ16647 500 aa28.24■■■□□ 2.11
UPF3A-209ENST00000492270 TMEM240Q5SV17 173 aa28.24■■■□□ 2.11
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