RNA–Protein interactions for RNA: ENST00000492142.5

TRO-223, Transcript of trophinin, human

TSL 3

Gene TRO, Length 485 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRO-223	ENST00000492142	HOXC6	P09630	235 aa		11.04	□□□□□ -0.64
TRO-223	ENST00000492142	EDNRB	P24530	442 aa		11.04	□□□□□ -0.64
TRO-223	ENST00000492142	ARHGEF6	Q15052	776 aa		11.04	□□□□□ -0.64
TRO-223	ENST00000492142	CALCRL	Q16602	461 aa		11.04	□□□□□ -0.64
TRO-223	ENST00000492142	CLEC17A	Q6ZS10	378 aa		11.04	□□□□□ -0.64
TRO-223	ENST00000492142	ARMCX2	Q7L311	632 aa		11.04	□□□□□ -0.64
TRO-223	ENST00000492142	ZNF467	Q7Z7K2	595 aa	Predicted RBP	11.04	□□□□□ -0.64
TRO-223	ENST00000492142	NLRX1	Q86UT6	975 aa		11.04	□□□□□ -0.64
TRO-223	ENST00000492142	LENG9	Q96B70	501 aa		11.04	□□□□□ -0.64
TRO-223	ENST00000492142	TINF2	Q9BSI4	451 aa		11.04	□□□□□ -0.64
TRO-223	ENST00000492142	SCAND2P	Q9GZW5	306 aa	Predicted RBP	11.04	□□□□□ -0.64
TRO-223	ENST00000492142	JADE2	Q9NQC1	790 aa		11.04	□□□□□ -0.64
TRO-223	ENST00000492142	FLRT1	Q9NZU1	646 aa		11.04	□□□□□ -0.64
TRO-223	ENST00000492142	SRRD	Q9UH36	339 aa		11.04	□□□□□ -0.64
TRO-223	ENST00000492142	LOC102724159	A0A0B4J2E5	919 aa		11.03	□□□□□ -0.64
TRO-223	ENST00000492142	MSH4	O15457	936 aa		11.03	□□□□□ -0.64
TRO-223	ENST00000492142	RGS20	O76081	388 aa		11.03	□□□□□ -0.64
TRO-223	ENST00000492142	SNAI1	O95863	264 aa	Predicted RBP	11.03	□□□□□ -0.64
TRO-223	ENST00000492142	OR52Z1	P0C646	297 aa		11.03	□□□□□ -0.64
TRO-223	ENST00000492142	CYP2C19	P33261	490 aa		11.03	□□□□□ -0.64
TRO-223	ENST00000492142	TXK	P42681	527 aa		11.03	□□□□□ -0.64
TRO-223	ENST00000492142	ME1	P48163	572 aa		11.03	□□□□□ -0.64
TRO-223	ENST00000492142	ATP2C1	P98194	919 aa	Predicted RBP	11.03	□□□□□ -0.64
TRO-223	ENST00000492142	ORC2	Q13416	577 aa	Predicted RBP	11.03	□□□□□ -0.64
TRO-223	ENST00000492142	MTMR1	Q13613	665 aa		11.03	□□□□□ -0.64
TRO-223	ENST00000492142	PWP2	Q15269	919 aa	Known RBP	11.03	□□□□□ -0.64
TRO-223	ENST00000492142	PRAMEF19	Q5SWL8	479 aa		11.03	□□□□□ -0.64
TRO-223	ENST00000492142	MAMDC4	Q6UXC1	1216 aa		11.03	□□□□□ -0.64
TRO-223	ENST00000492142	NIPA1	Q7RTP0	329 aa		11.03	□□□□□ -0.64
TRO-223	ENST00000492142	FBXO16	Q8IX29	292 aa	Predicted RBP	11.03	□□□□□ -0.64
TRO-223	ENST00000492142	KCNG4	Q8TDN1	519 aa		11.03	□□□□□ -0.64
TRO-223	ENST00000492142	MORC4	Q8TE76	937 aa		11.03	□□□□□ -0.64
TRO-223	ENST00000492142	HAS1	Q92839	578 aa		11.03	□□□□□ -0.64
TRO-223	ENST00000492142	INPP4A	Q96PE3	977 aa	Predicted RBP	11.03	□□□□□ -0.64
TRO-223	ENST00000492142	APBA2	Q99767	749 aa		11.03	□□□□□ -0.64
TRO-223	ENST00000492142	ZNF577	Q9BSK1	485 aa		11.03	□□□□□ -0.64
TRO-223	ENST00000492142	KCNH7	Q9NS40	1196 aa		11.03	□□□□□ -0.64
TRO-223	ENST00000492142	CDKN2AIP	Q9NXV6	580 aa	Predicted RBP	11.03	□□□□□ -0.64
TRO-223	ENST00000492142	VWA3A	A6NCI4	1184 aa		11.02	□□□□□ -0.65
TRO-223	ENST00000492142	SPATA31C2	B4DYI2	1134 aa		11.02	□□□□□ -0.65
TRO-223	ENST00000492142	LAD1	O00515	517 aa		11.02	□□□□□ -0.65
TRO-223	ENST00000492142	SORBS3	O60504	671 aa		11.02	□□□□□ -0.65
TRO-223	ENST00000492142	PRPF40A	O75400	957 aa	Known RBP	11.02	□□□□□ -0.65
TRO-223	ENST00000492142	STAM2	O75886	525 aa		11.02	□□□□□ -0.65
TRO-223	ENST00000492142	XRCC5	P13010	732 aa	Known RBP	11.02	□□□□□ -0.65
TRO-223	ENST00000492142	SEMA3F	Q13275	785 aa		11.02	□□□□□ -0.65
TRO-223	ENST00000492142	IL17A	Q16552	155 aa		11.02	□□□□□ -0.65
TRO-223	ENST00000492142	CSPP1	Q1MSJ5	1256 aa		11.02	□□□□□ -0.65
TRO-223	ENST00000492142	GNPTAB	Q3T906	1256 aa		11.02	□□□□□ -0.65
TRO-223	ENST00000492142	OLFML2B	Q68BL8	750 aa		11.02	□□□□□ -0.65
TRO-223	ENST00000492142	DTHD1	Q6ZMT9	781 aa		11.02	□□□□□ -0.65
TRO-223	ENST00000492142	JMY	Q8N9B5	988 aa		11.02	□□□□□ -0.65
TRO-223	ENST00000492142	ETNPPL	Q8TBG4	499 aa		11.02	□□□□□ -0.65
TRO-223	ENST00000492142	RAET1E	Q8TD07	263 aa		11.02	□□□□□ -0.65
TRO-223	ENST00000492142	GPRASP2	Q96D09	838 aa		11.02	□□□□□ -0.65
TRO-223	ENST00000492142	CLIC6	Q96NY7	704 aa		11.02	□□□□□ -0.65
TRO-223	ENST00000492142	MTMR9	Q96QG7	549 aa		11.02	□□□□□ -0.65
TRO-223	ENST00000492142	AGO4	Q9HCK5	861 aa	Known RBP	11.02	□□□□□ -0.65
TRO-223	ENST00000492142	KCNMB3	Q9NPA1	279 aa		11.02	□□□□□ -0.65
TRO-223	ENST00000492142	PDGFC	Q9NRA1	345 aa		11.02	□□□□□ -0.65
TRO-223	ENST00000492142	FBXO2	Q9UK22	296 aa	Predicted RBP	11.02	□□□□□ -0.65
TRO-223	ENST00000492142	PCDHA7	Q9UN72	937 aa		11.02	□□□□□ -0.65
TRO-223	ENST00000492142	TRIM17	Q9Y577	477 aa		11.02	□□□□□ -0.65
TRO-223	ENST00000492142	CASP8AP2	Q9UKL3	1982 aa		11.02	□□□□□ -0.65
TRO-223	ENST00000492142	ZNF236	Q9UL36	1845 aa		11.02	□□□□□ -0.65
TRO-223	ENST00000492142	KIAA1217	Q5T5P2	1943 aa		11.01	□□□□□ -0.65
TRO-223	ENST00000492142	DDX39A	O00148	427 aa	Known RBP	11.01	□□□□□ -0.65
TRO-223	ENST00000492142	IPO5	O00410	1097 aa	Known RBP	11.01	□□□□□ -0.65
TRO-223	ENST00000492142	TBX3	O15119	743 aa		11.01	□□□□□ -0.65
TRO-223	ENST00000492142	FOXN1	O15353	648 aa		11.01	□□□□□ -0.65
TRO-223	ENST00000492142	GALR2	O43603	387 aa	Predicted RBP	11.01	□□□□□ -0.65
TRO-223	ENST00000492142	ADCY3	O60266	1144 aa		11.01	□□□□□ -0.65
TRO-223	ENST00000492142	ATP9A	O75110	1047 aa		11.01	□□□□□ -0.65
TRO-223	ENST00000492142	PPP6R2	O75170	966 aa		11.01	□□□□□ -0.65
TRO-223	ENST00000492142	GNRH1	P01148	92 aa		11.01	□□□□□ -0.65
TRO-223	ENST00000492142	ELN	P15502	786 aa		11.01	□□□□□ -0.65
TRO-223	ENST00000492142	MCM4	P33991	863 aa		11.01	□□□□□ -0.65
TRO-223	ENST00000492142	TEC	P42680	631 aa		11.01	□□□□□ -0.65
TRO-223	ENST00000492142	SET	Q01105	290 aa	Predicted RBP	11.01	□□□□□ -0.65
TRO-223	ENST00000492142	GRIN1	Q05586	938 aa		11.01	□□□□□ -0.65
TRO-223	ENST00000492142	ACVR2B	Q13705	512 aa		11.01	□□□□□ -0.65
TRO-223	ENST00000492142	SPECC1	Q5M775	1068 aa		11.01	□□□□□ -0.65
TRO-223	ENST00000492142	MFSD14C	Q5VZR4	134 aa		11.01	□□□□□ -0.65
TRO-223	ENST00000492142	TAPT1	Q6NXT6	567 aa		11.01	□□□□□ -0.65
TRO-223	ENST00000492142	OTOP1	Q7RTM1	612 aa		11.01	□□□□□ -0.65
TRO-223	ENST00000492142	SLFN12	Q8IYM2	578 aa		11.01	□□□□□ -0.65
TRO-223	ENST00000492142	MSL3	Q8N5Y2	521 aa	Known RBP	11.01	□□□□□ -0.65
TRO-223	ENST00000492142	KRI1	Q8N9T8	703 aa	Known RBP	11.01	□□□□□ -0.65
TRO-223	ENST00000492142	SLC5A5	Q92911	643 aa		11.01	□□□□□ -0.65
TRO-223	ENST00000492142	CDHR1	Q96JP9	859 aa		11.01	□□□□□ -0.65
TRO-223	ENST00000492142	FAM20A	Q96MK3	541 aa		11.01	□□□□□ -0.65
TRO-223	ENST00000492142	BCAS3	Q9H6U6	928 aa		11.01	□□□□□ -0.65
TRO-223	ENST00000492142	TTC12	Q9H892	705 aa	Predicted RBP	11.01	□□□□□ -0.65
TRO-223	ENST00000492142	VTA1	Q9NP79	307 aa		11.01	□□□□□ -0.65
TRO-223	ENST00000492142	ZHX1	Q9UKY1	873 aa	Predicted RBP	11.01	□□□□□ -0.65
TRO-223	ENST00000492142	PCDHA12	Q9UN75	941 aa		11.01	□□□□□ -0.65
TRO-223	ENST00000492142	SRPRB	Q9Y5M8	271 aa	Known RBP	11.01	□□□□□ -0.65
TRO-223	ENST00000492142	SYNGAP1	Q96PV0	1343 aa		11.01	□□□□□ -0.65
TRO-223	ENST00000492142	CEP350	Q5VT06	3117 aa		11.01	□□□□□ -0.65
TRO-223	ENST00000492142	PCNT	O95613	3336 aa		11.01	□□□□□ -0.65

Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms