RNA–Protein interactions for RNA: ENST00000491987.1

TOM1-215, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 5

Gene TOM1, Length 852 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-215ENST00000491987 HSDL1Q3SXM5 330 aa17.26■□□□□ 0.35
TOM1-215ENST00000491987 KCNB2Q92953 911 aa17.26■□□□□ 0.35
TOM1-215ENST00000491987 JAKMIP1Q96N16 626 aaKnown RBP17.26■□□□□ 0.35
TOM1-215ENST00000491987 GUCD1Q96NT3 240 aa17.26■□□□□ 0.35
TOM1-215ENST00000491987 INPP4AQ96PE3 977 aaPredicted RBP17.26■□□□□ 0.35
TOM1-215ENST00000491987 ALG1Q9BT22 464 aa17.26■□□□□ 0.35
TOM1-215ENST00000491987 PSTPIP2Q9H939 334 aa17.26■□□□□ 0.35
TOM1-215ENST00000491987 MLXIPQ9HAP2 919 aa17.26■□□□□ 0.35
TOM1-215ENST00000491987 STXBP5LQ9Y2K9 1186 aa17.26■□□□□ 0.35
TOM1-215ENST00000491987 F2P00734 622 aa17.25■□□□□ 0.35
TOM1-215ENST00000491987 FGBP02675 491 aa17.25■□□□□ 0.35
TOM1-215ENST00000491987 SEMA3FQ13275 785 aa17.25■□□□□ 0.35
TOM1-215ENST00000491987 MFSD10Q14728 455 aa17.25■□□□□ 0.35
TOM1-215ENST00000491987 RASIP1Q5U651 963 aa17.25■□□□□ 0.35
TOM1-215ENST00000491987 PCNX4Q63HM2 1172 aa17.25■□□□□ 0.35
TOM1-215ENST00000491987 GDF6Q6KF10 455 aaPredicted RBP17.25■□□□□ 0.35
TOM1-215ENST00000491987 OTOP2Q7RTS6 562 aa17.25■□□□□ 0.35
TOM1-215ENST00000491987 KATNAL1Q9BW62 490 aa17.25■□□□□ 0.35
TOM1-215ENST00000491987 BCAS3Q9H6U6 928 aa17.25■□□□□ 0.35
TOM1-215ENST00000491987 GRXCR1A8MXD5 290 aa17.24■□□□□ 0.35
TOM1-215ENST00000491987 FIBPO43427 364 aa17.24■□□□□ 0.35
TOM1-215ENST00000491987 PPFIA4O75335 1185 aa17.24■□□□□ 0.35
TOM1-215ENST00000491987 REC8O95072 547 aa17.24■□□□□ 0.35
TOM1-215ENST00000491987 HOXD8P13378 290 aaPredicted RBP17.24■□□□□ 0.35
TOM1-215ENST00000491987 CDC27P30260 824 aa17.24■□□□□ 0.35
TOM1-215ENST00000491987 ICAM3P32942 547 aa17.24■□□□□ 0.35
TOM1-215ENST00000491987 APOBRQ0VD83 1088 aa17.24■□□□□ 0.35
TOM1-215ENST00000491987 FUT2Q10981 343 aa17.24■□□□□ 0.35
TOM1-215ENST00000491987 KIAA0753Q2KHM9 967 aa17.24■□□□□ 0.35
TOM1-215ENST00000491987 WWC2Q6AWC2 1192 aa17.24■□□□□ 0.35
TOM1-215ENST00000491987 BLOC1S2Q6QNY1 142 aa17.24■□□□□ 0.35
TOM1-215ENST00000491987 Q6ZUG5 572 aa17.24■□□□□ 0.35
TOM1-215ENST00000491987 SESTD1Q86VW0 696 aa17.24■□□□□ 0.35
TOM1-215ENST00000491987 RPUSD2Q8IZ73 545 aaKnown RBP17.24■□□□□ 0.35
TOM1-215ENST00000491987 C7orf31Q8N865 590 aa17.24■□□□□ 0.35
TOM1-215ENST00000491987 HERVK_113Q902F9 699 aa17.24■□□□□ 0.35
TOM1-215ENST00000491987 MTIF3Q9H2K0 278 aaKnown RBP17.24■□□□□ 0.35
TOM1-215ENST00000491987 TTYH1Q9H313 450 aaPredicted RBP17.24■□□□□ 0.35
TOM1-215ENST00000491987 SEMA6BQ9H3T3 888 aa17.24■□□□□ 0.35
TOM1-215ENST00000491987 CXXC1Q9P0U4 656 aaPredicted RBP17.24■□□□□ 0.35
TOM1-215ENST00000491987 HDAC6Q9UBN7 1215 aa17.24■□□□□ 0.35
TOM1-215ENST00000491987 GTF2IRD1Q9UHL9 959 aa17.24■□□□□ 0.35
TOM1-215ENST00000491987 MYH7BA7E2Y1 1941 aa17.23■□□□□ 0.35
TOM1-215ENST00000491987 SPDYE3A6NKU9 549 aa17.23■□□□□ 0.35
TOM1-215ENST00000491987 SPATA31C2B4DYI2 1134 aa17.23■□□□□ 0.35
TOM1-215ENST00000491987 HAS3O00219 553 aa17.23■□□□□ 0.35
TOM1-215ENST00000491987 PITPNM1O00562 1244 aa17.23■□□□□ 0.35
TOM1-215ENST00000491987 DNAJB2P25686 324 aa17.23■□□□□ 0.35
TOM1-215ENST00000491987 XRRA1Q6P2D8 792 aa17.23■□□□□ 0.35
TOM1-215ENST00000491987 CYFIP1Q7L576 1253 aa17.23■□□□□ 0.35
TOM1-215ENST00000491987 DEFB128Q7Z7B8 93 aa17.23■□□□□ 0.35
TOM1-215ENST00000491987 RETREG2Q8NC44 543 aa17.23■□□□□ 0.35
TOM1-215ENST00000491987 VWCEQ96DN2 955 aa17.23■□□□□ 0.35
TOM1-215ENST00000491987 CTAGE1Q96RT6 745 aa17.23■□□□□ 0.35
TOM1-215ENST00000491987 FAM217BQ9NTX9 383 aaPredicted RBP17.23■□□□□ 0.35
TOM1-215ENST00000491987 TANC1Q9C0D5 1861 aa17.22■□□□□ 0.35
TOM1-215ENST00000491987 NOP56O00567 594 aaKnown RBP17.22■□□□□ 0.35
TOM1-215ENST00000491987 RPS6KB1P23443 525 aa17.22■□□□□ 0.35
TOM1-215ENST00000491987 PBX2P40425 430 aa17.22■□□□□ 0.35
TOM1-215ENST00000491987 METAP2P50579 478 aaKnown RBP eCLIP17.22■□□□□ 0.35
TOM1-215ENST00000491987 RCAN1P53805 252 aa17.22■□□□□ 0.35
TOM1-215ENST00000491987 NAPAP54920 295 aa17.22■□□□□ 0.35
TOM1-215ENST00000491987 BFSP2Q13515 415 aa17.22■□□□□ 0.35
TOM1-215ENST00000491987 NEDD9Q14511 834 aa17.22■□□□□ 0.35
TOM1-215ENST00000491987 TYW1BQ6NUM6 668 aa17.22■□□□□ 0.35
TOM1-215ENST00000491987 NLRX1Q86UT6 975 aa17.22■□□□□ 0.35
TOM1-215ENST00000491987 CCDC155Q8N6L0 562 aa17.22■□□□□ 0.35
TOM1-215ENST00000491987 BRF1Q92994 677 aa17.22■□□□□ 0.35
TOM1-215ENST00000491987 PCDHA6Q9UN73 950 aa17.22■□□□□ 0.35
TOM1-215ENST00000491987 PCDHA8Q9Y5H6 950 aa17.22■□□□□ 0.35
TOM1-215ENST00000491987 V9GY48 417 aaPredicted RBP17.22■□□□□ 0.35
TOM1-215ENST00000491987 TMEM265A0A087WTH1 108 aa17.21■□□□□ 0.35
TOM1-215ENST00000491987 ZBBXA8MT70 800 aa17.21■□□□□ 0.35
TOM1-215ENST00000491987 LGALS2P05162 132 aa17.21■□□□□ 0.35
TOM1-215ENST00000491987 PFKMP08237 780 aa17.21■□□□□ 0.35
TOM1-215ENST00000491987 IQCF3P0C7M6 154 aa17.21■□□□□ 0.35
TOM1-215ENST00000491987 SP4Q02446 784 aa17.21■□□□□ 0.35
TOM1-215ENST00000491987 PPP1R18Q6NYC8 613 aa17.21■□□□□ 0.35
TOM1-215ENST00000491987 METTL7BQ6UX53 244 aa17.21■□□□□ 0.35
TOM1-215ENST00000491987 DHX38Q92620 1227 aaKnown RBP17.21■□□□□ 0.35
TOM1-215ENST00000491987 CDX2Q99626 313 aaPredicted RBP17.21■□□□□ 0.35
TOM1-215ENST00000491987 C16orf70Q9BSU1 422 aa17.21■□□□□ 0.35
TOM1-215ENST00000491987 PBX4Q9BYU1 374 aa17.21■□□□□ 0.35
TOM1-215ENST00000491987 PPP4R2Q9NY27 417 aa17.21■□□□□ 0.35
TOM1-215ENST00000491987 TELO2Q9Y4R8 837 aa17.21■□□□□ 0.35
TOM1-215ENST00000491987 LAMA2P24043 3122 aaKnown RBP17.21■□□□□ 0.34
TOM1-215ENST00000491987 SCN5AQ14524 2016 aa17.2■□□□□ 0.34
TOM1-215ENST00000491987 PSMA5P28066 241 aa17.2■□□□□ 0.34
TOM1-215ENST00000491987 RFC2P35250 354 aa17.2■□□□□ 0.34
TOM1-215ENST00000491987 ADD1P35611 737 aaKnown RBP17.2■□□□□ 0.34
TOM1-215ENST00000491987 ZNF200P98182 395 aaPredicted RBP17.2■□□□□ 0.34
TOM1-215ENST00000491987 CAGE1Q8TC20 777 aa17.2■□□□□ 0.34
TOM1-215ENST00000491987 AFAP1L1Q8TED9 768 aa17.2■□□□□ 0.34
TOM1-215ENST00000491987 MYLIPQ8WY64 445 aa17.2■□□□□ 0.34
TOM1-215ENST00000491987 TIFAQ96CG3 184 aa17.2■□□□□ 0.34
TOM1-215ENST00000491987 GPR20Q99678 358 aa17.2■□□□□ 0.34
TOM1-215ENST00000491987 RIC8AQ9NPQ8 531 aa17.2■□□□□ 0.34
TOM1-215ENST00000491987 DOCK5Q9H7D0 1870 aa17.19■□□□□ 0.34
TOM1-215ENST00000491987 hCG_1984214I3L0E3 225 aa17.19■□□□□ 0.34
TOM1-215ENST00000491987 STXBP3O00186 592 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms