RNA–Protein interactions for RNA: ENST00000491967.1

SMARCB1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 605 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-207ENST00000491967 BMP2KLQ5H9B9 411 aa9.7□□□□□ -0.86
SMARCB1-207ENST00000491967 SGMS1Q86VZ5 419 aa9.7□□□□□ -0.86
SMARCB1-207ENST00000491967 DHX37Q8IY37 1157 aaKnown RBP9.7□□□□□ -0.86
SMARCB1-207ENST00000491967 ZNF654Q8IZM8 581 aa9.7□□□□□ -0.86
SMARCB1-207ENST00000491967 AFAP1L1Q8TED9 768 aa9.7□□□□□ -0.86
SMARCB1-207ENST00000491967 TMEM87BQ96K49 555 aa9.7□□□□□ -0.86
SMARCB1-207ENST00000491967 LZTS2Q9BRK4 669 aa9.7□□□□□ -0.86
SMARCB1-207ENST00000491967 MSRAQ9UJ68 235 aa9.7□□□□□ -0.86
SMARCB1-207ENST00000491967 MRVI1Q9Y6F6 885 aa9.7□□□□□ -0.86
SMARCB1-207ENST00000491967 VCANP13611 3396 aa9.69□□□□□ -0.86
SMARCB1-207ENST00000491967 PRC1O43663 620 aa9.69□□□□□ -0.86
SMARCB1-207ENST00000491967 BAIAP3O94812 1187 aa9.69□□□□□ -0.86
SMARCB1-207ENST00000491967 SELPP16109 830 aa9.69□□□□□ -0.86
SMARCB1-207ENST00000491967 ATP2A2P16615 1042 aaKnown RBP9.69□□□□□ -0.86
SMARCB1-207ENST00000491967 UBA1P22314 1058 aaKnown RBP9.69□□□□□ -0.86
SMARCB1-207ENST00000491967 CCND2P30279 289 aa9.69□□□□□ -0.86
SMARCB1-207ENST00000491967 KIF5BP33176 963 aa9.69□□□□□ -0.86
SMARCB1-207ENST00000491967 PSEN2P49810 448 aa9.69□□□□□ -0.86
SMARCB1-207ENST00000491967 GNAQP50148 359 aa9.69□□□□□ -0.86
SMARCB1-207ENST00000491967 EXOSC10Q01780 885 aaKnown RBP9.69□□□□□ -0.86
SMARCB1-207ENST00000491967 SEMA3FQ13275 785 aa9.69□□□□□ -0.86
SMARCB1-207ENST00000491967 PTK7Q13308 1070 aa9.69□□□□□ -0.86
SMARCB1-207ENST00000491967 MKRN4PQ13434 485 aaPredicted RBP9.69□□□□□ -0.86
SMARCB1-207ENST00000491967 MFSD10Q14728 455 aa9.69□□□□□ -0.86
SMARCB1-207ENST00000491967 FAM47CQ5HY64 1035 aa9.69□□□□□ -0.86
SMARCB1-207ENST00000491967 CREB3L3Q68CJ9 461 aa9.69□□□□□ -0.86
SMARCB1-207ENST00000491967 XRRA1Q6P2D8 792 aa9.69□□□□□ -0.86
SMARCB1-207ENST00000491967 HOMER1Q86YM7 354 aa9.69□□□□□ -0.86
SMARCB1-207ENST00000491967 TEX2Q8IWB9 1127 aa9.69□□□□□ -0.86
SMARCB1-207ENST00000491967 SRBD1Q8N5C6 995 aaKnown RBP9.69□□□□□ -0.86
SMARCB1-207ENST00000491967 USP38Q8NB14 1042 aa9.69□□□□□ -0.86
SMARCB1-207ENST00000491967 RETREG2Q8NC44 543 aa9.69□□□□□ -0.86
SMARCB1-207ENST00000491967 PPP1R13LQ8WUF5 828 aa9.69□□□□□ -0.86
SMARCB1-207ENST00000491967 GPKOWQ92917 476 aaPredicted RBP eCLIP9.69□□□□□ -0.86
SMARCB1-207ENST00000491967 KATNAL1Q9BW62 490 aa9.69□□□□□ -0.86
SMARCB1-207ENST00000491967 SLC28A3Q9HAS3 691 aa9.69□□□□□ -0.86
SMARCB1-207ENST00000491967 HDAC6Q9UBN7 1215 aa9.69□□□□□ -0.86
SMARCB1-207ENST00000491967 KAT6AQ92794 2004 aa9.68□□□□□ -0.86
SMARCB1-207ENST00000491967 DOCK5Q9H7D0 1870 aa9.68□□□□□ -0.86
SMARCB1-207ENST00000491967 NBNO60934 754 aa9.68□□□□□ -0.86
SMARCB1-207ENST00000491967 GGPS1O95749 300 aa9.68□□□□□ -0.86
SMARCB1-207ENST00000491967 CALM1P0DP23 149 aa9.68□□□□□ -0.86
SMARCB1-207ENST00000491967 CALM2P0DP24 149 aa9.68□□□□□ -0.86
SMARCB1-207ENST00000491967 CALM3P0DP25 149 aa9.68□□□□□ -0.86
SMARCB1-207ENST00000491967 CKBP12277 381 aa9.68□□□□□ -0.86
SMARCB1-207ENST00000491967 MYCLP12524 364 aaPredicted RBP9.68□□□□□ -0.86
SMARCB1-207ENST00000491967 ACTN1P12814 892 aa9.68□□□□□ -0.86
SMARCB1-207ENST00000491967 MYOGP15173 224 aa9.68□□□□□ -0.86
SMARCB1-207ENST00000491967 RABGGTBP53611 331 aa9.68□□□□□ -0.86
SMARCB1-207ENST00000491967 KIAA0753Q2KHM9 967 aa9.68□□□□□ -0.86
SMARCB1-207ENST00000491967 PCNX4Q63HM2 1172 aa9.68□□□□□ -0.86
SMARCB1-207ENST00000491967 METTL7BQ6UX53 244 aa9.68□□□□□ -0.86
SMARCB1-207ENST00000491967 DEFB128Q7Z7B8 93 aa9.68□□□□□ -0.86
SMARCB1-207ENST00000491967 SERINC5Q86VE9 423 aa9.68□□□□□ -0.86
SMARCB1-207ENST00000491967 FCHSD1Q86WN1 690 aa9.68□□□□□ -0.86
SMARCB1-207ENST00000491967 CCDC155Q8N6L0 562 aa9.68□□□□□ -0.86
SMARCB1-207ENST00000491967 C7orf31Q8N865 590 aa9.68□□□□□ -0.86
SMARCB1-207ENST00000491967 FANCBQ8NB91 859 aa9.68□□□□□ -0.86
SMARCB1-207ENST00000491967 RRP36Q96EU6 259 aaKnown RBP9.68□□□□□ -0.86
SMARCB1-207ENST00000491967 SPATA33Q96N06 139 aa9.68□□□□□ -0.86
SMARCB1-207ENST00000491967 SLC9A7Q96T83 725 aa9.68□□□□□ -0.86
SMARCB1-207ENST00000491967 SENP7Q9BQF6 1050 aa9.68□□□□□ -0.86
SMARCB1-207ENST00000491967 NKX2-4Q9H2Z4 354 aa9.68□□□□□ -0.86
SMARCB1-207ENST00000491967 PRDM12Q9H4Q4 367 aa9.68□□□□□ -0.86
SMARCB1-207ENST00000491967 BCAS3Q9H6U6 928 aa9.68□□□□□ -0.86
SMARCB1-207ENST00000491967 BRWD1Q9NSI6 2320 aa9.67□□□□□ -0.86
SMARCB1-207ENST00000491967 ABHD14A-ACY1A0A1B0GW23 586 aa9.67□□□□□ -0.86
SMARCB1-207ENST00000491967 PLEKHA8P1O95397 391 aa9.67□□□□□ -0.86
SMARCB1-207ENST00000491967 ZNF286BP0CG31 522 aa9.67□□□□□ -0.86
SMARCB1-207ENST00000491967 ADAM17P78536 824 aa9.67□□□□□ -0.86
SMARCB1-207ENST00000491967 FUT2Q10981 343 aa9.67□□□□□ -0.86
SMARCB1-207ENST00000491967 NEDD9Q14511 834 aa9.67□□□□□ -0.86
SMARCB1-207ENST00000491967 MBTPS1Q14703 1052 aa9.67□□□□□ -0.86
SMARCB1-207ENST00000491967 TCTN1Q2MV58 587 aa9.67□□□□□ -0.86
SMARCB1-207ENST00000491967 USP17L6PQ6QN14 398 aa9.67□□□□□ -0.86
SMARCB1-207ENST00000491967 CASC1Q6TDU7 716 aa9.67□□□□□ -0.86
SMARCB1-207ENST00000491967 LRRC8DQ7L1W4 858 aa9.67□□□□□ -0.86
SMARCB1-207ENST00000491967 CENPQQ7L2Z9 268 aaPredicted RBP9.67□□□□□ -0.86
SMARCB1-207ENST00000491967 HERC6Q8IVU3 1022 aa9.67□□□□□ -0.86
SMARCB1-207ENST00000491967 CTCFLQ8NI51 663 aaPredicted RBP9.67□□□□□ -0.86
SMARCB1-207ENST00000491967 KCNB2Q92953 911 aa9.67□□□□□ -0.86
SMARCB1-207ENST00000491967 WNT8BQ93098 351 aa9.67□□□□□ -0.86
SMARCB1-207ENST00000491967 MYL10Q9BUA6 226 aa9.67□□□□□ -0.86
SMARCB1-207ENST00000491967 USP26Q9BXU7 913 aa9.67□□□□□ -0.86
SMARCB1-207ENST00000491967 H3BRB1 525 aa9.66□□□□□ -0.86
SMARCB1-207ENST00000491967 FIBPO43427 364 aa9.66□□□□□ -0.86
SMARCB1-207ENST00000491967 CAND2O75155 1236 aa9.66□□□□□ -0.86
SMARCB1-207ENST00000491967 ZNF200P98182 395 aaPredicted RBP9.66□□□□□ -0.86
SMARCB1-207ENST00000491967 TAP1Q03518 808 aa9.66□□□□□ -0.86
SMARCB1-207ENST00000491967 GNPTABQ3T906 1256 aa9.66□□□□□ -0.86
SMARCB1-207ENST00000491967 ZNF618Q5T7W0 954 aa9.66□□□□□ -0.86
SMARCB1-207ENST00000491967 CNKSR3Q6P9H4 555 aa9.66□□□□□ -0.86
SMARCB1-207ENST00000491967 TMTC3Q6ZXV5 915 aa9.66□□□□□ -0.86
SMARCB1-207ENST00000491967 ZFP91Q96JP5 570 aaPredicted RBP9.66□□□□□ -0.86
SMARCB1-207ENST00000491967 GAS2L1Q99501 681 aaPredicted RBP9.66□□□□□ -0.86
SMARCB1-207ENST00000491967 GPR20Q99678 358 aa9.66□□□□□ -0.86
SMARCB1-207ENST00000491967 TUT1Q9H6E5 874 aaKnown RBP9.66□□□□□ -0.86
SMARCB1-207ENST00000491967 PSTPIP2Q9H939 334 aa9.66□□□□□ -0.86
SMARCB1-207ENST00000491967 MLXIPQ9HAP2 919 aa9.66□□□□□ -0.86
SMARCB1-207ENST00000491967 NOD1Q9Y239 953 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 109.9 ms