RNA–Protein interactions for RNA: ENST00000491922.1

CCDC6-202, Transcript of coiled-coil domain containing 6, humanhuman

TSL 2

Gene CCDC6, Length 2,642 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC6-202ENST00000491922 MTMR8Q96EF0 704 aa7.07□□□□□ -1.28
CCDC6-202ENST00000491922 IFT74Q96LB3 600 aa7.07□□□□□ -1.28
CCDC6-202ENST00000491922 INPP4AQ96PE3 977 aaPredicted RBP7.07□□□□□ -1.28
CCDC6-202ENST00000491922 MTA3Q9BTC8 594 aa7.07□□□□□ -1.28
CCDC6-202ENST00000491922 RNF26Q9BY78 433 aaPredicted RBP7.07□□□□□ -1.28
CCDC6-202ENST00000491922 KRT23Q9C075 422 aa7.07□□□□□ -1.28
CCDC6-202ENST00000491922 RGL1Q9NZL6 768 aa7.07□□□□□ -1.28
CCDC6-202ENST00000491922 ANKIB1Q9P2G1 1089 aa7.07□□□□□ -1.28
CCDC6-202ENST00000491922 CEP126Q9P2H0 1117 aa7.07□□□□□ -1.28
CCDC6-202ENST00000491922 TMEM59LQ9UK28 342 aa7.07□□□□□ -1.28
CCDC6-202ENST00000491922 KIF1AQ12756 1690 aa7.07□□□□□ -1.28
CCDC6-202ENST00000491922 FAM205CA6NFA0 338 aa7.06□□□□□ -1.28
CCDC6-202ENST00000491922 BHMG1C9JSJ3 638 aaPredicted RBP7.06□□□□□ -1.28
CCDC6-202ENST00000491922 SMIM24O75264 130 aa7.06□□□□□ -1.28
CCDC6-202ENST00000491922 NPTXRO95502 500 aa7.06□□□□□ -1.28
CCDC6-202ENST00000491922 VIMP08670 466 aaKnown RBP7.06□□□□□ -1.28
CCDC6-202ENST00000491922 CNGA1P29973 690 aa7.06□□□□□ -1.28
CCDC6-202ENST00000491922 ABL2P42684 1182 aa7.06□□□□□ -1.28
CCDC6-202ENST00000491922 ZAP70P43403 619 aa7.06□□□□□ -1.28
CCDC6-202ENST00000491922 ALDH5A1P51649 535 aaPredicted RBP7.06□□□□□ -1.28
CCDC6-202ENST00000491922 PMS1P54277 932 aaKnown RBP7.06□□□□□ -1.28
CCDC6-202ENST00000491922 MRPS35P82673 323 aaKnown RBP7.06□□□□□ -1.28
CCDC6-202ENST00000491922 LACTBP83111 547 aaPredicted RBP7.06□□□□□ -1.28
CCDC6-202ENST00000491922 ATP11AP98196 1134 aa7.06□□□□□ -1.28
CCDC6-202ENST00000491922 LAMB3Q13751 1172 aa7.06□□□□□ -1.28
CCDC6-202ENST00000491922 TAF11Q15544 211 aa7.06□□□□□ -1.28
CCDC6-202ENST00000491922 ALX1Q15699 326 aa7.06□□□□□ -1.28
CCDC6-202ENST00000491922 CCDC57Q2TAC2 916 aa7.06□□□□□ -1.28
CCDC6-202ENST00000491922 TBC1D25Q3MII6 688 aa7.06□□□□□ -1.28
CCDC6-202ENST00000491922 LRRC24Q50LG9 513 aa7.06□□□□□ -1.28
CCDC6-202ENST00000491922 CMPK2Q5EBM0 449 aa7.06□□□□□ -1.28
CCDC6-202ENST00000491922 HOOK3Q86VS8 718 aa7.06□□□□□ -1.28
CCDC6-202ENST00000491922 TMTC2Q8N394 836 aa7.06□□□□□ -1.28
CCDC6-202ENST00000491922 ABTB2Q8N961 1025 aa7.06□□□□□ -1.28
CCDC6-202ENST00000491922 LPIN2Q92539 896 aa7.06□□□□□ -1.28
CCDC6-202ENST00000491922 CNOT6LQ96LI5 555 aaKnown RBP7.06□□□□□ -1.28
CCDC6-202ENST00000491922 PHF20Q9BVI0 1012 aa7.06□□□□□ -1.28
CCDC6-202ENST00000491922 NOC4LQ9BVI4 516 aaKnown RBP7.06□□□□□ -1.28
CCDC6-202ENST00000491922 FBXL5Q9UKA1 691 aa7.06□□□□□ -1.28
CCDC6-202ENST00000491922 SSU72P8A0A1W2PR75 194 aa7.06□□□□□ -1.28
CCDC6-202ENST00000491922 MMEP08473 750 aa7.06□□□□□ -1.28
CCDC6-202ENST00000491922 CDC25CP30307 473 aa7.06□□□□□ -1.28
CCDC6-202ENST00000491922 ADD2P35612 726 aa7.06□□□□□ -1.28
CCDC6-202ENST00000491922 PPP1R2P41236 205 aa7.06□□□□□ -1.28
CCDC6-202ENST00000491922 STAT6P42226 847 aa7.06□□□□□ -1.28
CCDC6-202ENST00000491922 NCALDP61601 193 aa7.06□□□□□ -1.28
CCDC6-202ENST00000491922 PTGDRQ13258 359 aa7.06□□□□□ -1.28
CCDC6-202ENST00000491922 LBRQ14739 615 aaKnown RBP7.06□□□□□ -1.28
CCDC6-202ENST00000491922 WTAPQ15007 396 aa7.06□□□□□ -1.28
CCDC6-202ENST00000491922 PPP2R5BQ15173 497 aa7.06□□□□□ -1.28
CCDC6-202ENST00000491922 TRADDQ15628 312 aa7.06□□□□□ -1.28
CCDC6-202ENST00000491922 ZNF174Q15697 407 aa7.06□□□□□ -1.28
CCDC6-202ENST00000491922 FAM133BQ5BKY9 247 aaKnown RBP7.06□□□□□ -1.28
CCDC6-202ENST00000491922 MEI1Q5TIA1 1274 aa7.06□□□□□ -1.28
CCDC6-202ENST00000491922 LMNTD2Q8IXW0 634 aa7.06□□□□□ -1.28
CCDC6-202ENST00000491922 KLHL23Q8NBE8 558 aa7.06□□□□□ -1.28
CCDC6-202ENST00000491922 GIMAP8Q8ND71 665 aaPredicted RBP7.06□□□□□ -1.28
CCDC6-202ENST00000491922 NAF1Q96HR8 494 aaKnown RBP7.06□□□□□ -1.28
CCDC6-202ENST00000491922 RAB17Q9H0T7 212 aa7.06□□□□□ -1.28
CCDC6-202ENST00000491922 CCDC134Q9H6E4 229 aa7.06□□□□□ -1.28
CCDC6-202ENST00000491922 ZSWIM5Q9P217 1185 aa7.06□□□□□ -1.28
CCDC6-202ENST00000491922 SALL4Q9UJQ4 1053 aa7.06□□□□□ -1.28
CCDC6-202ENST00000491922 ATP5J2-PTCD1G3V325 749 aa7.05□□□□□ -1.28
CCDC6-202ENST00000491922 RBAK-RBAKDNI3L0D1 243 aa7.05□□□□□ -1.28
CCDC6-202ENST00000491922 SART1O43290 800 aaKnown RBP7.05□□□□□ -1.28
CCDC6-202ENST00000491922 BUB1O43683 1085 aa7.05□□□□□ -1.28
CCDC6-202ENST00000491922 EVI5O60447 810 aa7.05□□□□□ -1.28
CCDC6-202ENST00000491922 PTCD1O75127 700 aaKnown RBP7.05□□□□□ -1.28
CCDC6-202ENST00000491922 PALMO75781 387 aa7.05□□□□□ -1.28
CCDC6-202ENST00000491922 RHOBTB3O94955 611 aa7.05□□□□□ -1.28
CCDC6-202ENST00000491922 RARAP10276 462 aa7.05□□□□□ -1.28
CCDC6-202ENST00000491922 CCNE1P24864 410 aa7.05□□□□□ -1.28
CCDC6-202ENST00000491922 KCNJ2P63252 427 aa7.05□□□□□ -1.28
CCDC6-202ENST00000491922 MXRA7P84157 204 aa7.05□□□□□ -1.28
CCDC6-202ENST00000491922 RASSF7Q02833 373 aa7.05□□□□□ -1.28
CCDC6-202ENST00000491922 SGSM1Q2NKQ1 1148 aa7.05□□□□□ -1.28
CCDC6-202ENST00000491922 MIIPQ5JXC2 388 aa7.05□□□□□ -1.28
CCDC6-202ENST00000491922 ZNF790Q6PG37 636 aa7.05□□□□□ -1.28
CCDC6-202ENST00000491922 LRP10Q7Z4F1 713 aa7.05□□□□□ -1.28
CCDC6-202ENST00000491922 ERICH1Q86X53 443 aa7.05□□□□□ -1.28
CCDC6-202ENST00000491922 KLHL7Q8IXQ5 586 aa7.05□□□□□ -1.28
CCDC6-202ENST00000491922 TAF4BQ92750 862 aa7.05□□□□□ -1.28
CCDC6-202ENST00000491922 EZH1Q92800 747 aaPredicted RBP7.05□□□□□ -1.28
CCDC6-202ENST00000491922 DUSP9Q99956 384 aaKnown RBP7.05□□□□□ -1.28
CCDC6-202ENST00000491922 ECT2Q9H8V3 914 aa7.05□□□□□ -1.28
CCDC6-202ENST00000491922 AGAP1Q9UPQ3 857 aa7.05□□□□□ -1.28
CCDC6-202ENST00000491922 MYH1P12882 1939 aa7.05□□□□□ -1.28
CCDC6-202ENST00000491922 TJP1Q07157 1748 aa7.05□□□□□ -1.28
CCDC6-202ENST00000491922 SPDYE3A6NKU9 549 aa7.05□□□□□ -1.28
CCDC6-202ENST00000491922 E7ENQ6 273 aa7.05□□□□□ -1.28
CCDC6-202ENST00000491922 F8VZ95 297 aa7.05□□□□□ -1.28
CCDC6-202ENST00000491922 IGF2BP3O00425 579 aaKnown RBP eCLIP7.05□□□□□ -1.282e-7■■□□□ 12.1
CCDC6-202ENST00000491922 ALDH3A1P30838 453 aa7.05□□□□□ -1.28
CCDC6-202ENST00000491922 LONP1P36776 959 aaKnown RBP7.05□□□□□ -1.28
CCDC6-202ENST00000491922 TRAPPC10P48553 1259 aa7.05□□□□□ -1.28
CCDC6-202ENST00000491922 PDIA5Q14554 519 aa7.05□□□□□ -1.28
CCDC6-202ENST00000491922 UBE3CQ15386 1083 aa7.05□□□□□ -1.28
CCDC6-202ENST00000491922 ASTE1Q2TB18 679 aaPredicted RBP7.05□□□□□ -1.28
CCDC6-202ENST00000491922 GNPTABQ3T906 1256 aa7.05□□□□□ -1.28
CCDC6-202ENST00000491922 EARS2Q5JPH6 523 aaKnown RBP7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms