RNA–Protein interactions for RNA: ENST00000491761.1

SNED1-211, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

TSL 1 (best)

Gene SNED1, Length 4,125 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-211ENST00000491761 ESYT2A0FGR8 921 aa11.85□□□□□ -0.51
SNED1-211ENST00000491761 TTLL1O95922 423 aa11.85□□□□□ -0.51
SNED1-211ENST00000491761 HOXA7P31268 230 aaPredicted RBP11.85□□□□□ -0.51
SNED1-211ENST00000491761 ARHGAP25P42331 645 aa11.85□□□□□ -0.51
SNED1-211ENST00000491761 PRR5LQ6MZQ0 368 aa11.85□□□□□ -0.51
SNED1-211ENST00000491761 KLHL7Q8IXQ5 586 aa11.85□□□□□ -0.51
SNED1-211ENST00000491761 MSANTD4Q8NCY6 345 aa11.85□□□□□ -0.51
SNED1-211ENST00000491761 AGPAT5Q9NUQ2 364 aa11.85□□□□□ -0.51
SNED1-211ENST00000491761 MKRN1Q9UHC7 482 aaKnown RBP11.85□□□□□ -0.51
SNED1-211ENST00000491761 GCOM1H8Y6P7 765 aaPredicted RBP11.84□□□□□ -0.51
SNED1-211ENST00000491761 RNF225M0QZC1 329 aaPredicted RBP11.84□□□□□ -0.51
SNED1-211ENST00000491761 PSMD14O00487 310 aa11.84□□□□□ -0.51
SNED1-211ENST00000491761 MYZAPP0CAP1 466 aa11.84□□□□□ -0.51
SNED1-211ENST00000491761 FECHP22830 423 aa11.84□□□□□ -0.51
SNED1-211ENST00000491761 PTF1AQ7RTS3 328 aa11.84□□□□□ -0.51
SNED1-211ENST00000491761 IRF2BP1Q8IU81 584 aa11.84□□□□□ -0.51
SNED1-211ENST00000491761 NT5C3AQ9H0P0 336 aa11.84□□□□□ -0.51
SNED1-211ENST00000491761 PSTPIP2Q9H939 334 aa11.84□□□□□ -0.51
SNED1-211ENST00000491761 RIC8AQ9NPQ8 531 aa11.84□□□□□ -0.51
SNED1-211ENST00000491761 PCDHA12Q9UN75 941 aa11.84□□□□□ -0.51
SNED1-211ENST00000491761 SASH3O75995 380 aa11.84□□□□□ -0.51
SNED1-211ENST00000491761 CYP2C19P33261 490 aa11.84□□□□□ -0.51
SNED1-211ENST00000491761 MRPS25P82663 173 aaKnown RBP11.84□□□□□ -0.51
SNED1-211ENST00000491761 LRRC63Q05C16 580 aa11.84□□□□□ -0.51
SNED1-211ENST00000491761 RAPGEF1Q13905 1077 aa11.84□□□□□ -0.51
SNED1-211ENST00000491761 PLS1Q14651 629 aa11.84□□□□□ -0.51
SNED1-211ENST00000491761 ROBO3Q96MS0 1386 aa11.84□□□□□ -0.51
SNED1-211ENST00000491761 PNMA6FA0A0J9YX94 578 aa11.84□□□□□ -0.51
SNED1-211ENST00000491761 TBCAO75347 108 aaKnown RBP11.84□□□□□ -0.51
SNED1-211ENST00000491761 EZRP15311 586 aaKnown RBP11.84□□□□□ -0.51
SNED1-211ENST00000491761 ADRA2BP18089 450 aa11.84□□□□□ -0.51
SNED1-211ENST00000491761 CTNNA2P26232 953 aa11.84□□□□□ -0.51
SNED1-211ENST00000491761 PSMD2Q13200 908 aa11.84□□□□□ -0.51
SNED1-211ENST00000491761 CASP8Q14790 479 aa11.84□□□□□ -0.51
SNED1-211ENST00000491761 GPATCH4Q5T3I0 446 aaKnown RBP11.84□□□□□ -0.51
SNED1-211ENST00000491761 ERMNQ8TAM6 284 aa11.84□□□□□ -0.51
SNED1-211ENST00000491761 HPS3Q969F9 1004 aa11.84□□□□□ -0.51
SNED1-211ENST00000491761 ANKZF1Q9H8Y5 726 aa11.84□□□□□ -0.51
SNED1-211ENST00000491761 HDAC6Q9UBN7 1215 aa11.84□□□□□ -0.51
SNED1-211ENST00000491761 SWAP70Q9UH65 585 aa11.84□□□□□ -0.51
SNED1-211ENST00000491761 SERPINB13Q9UIV8 391 aa11.84□□□□□ -0.51
SNED1-211ENST00000491761 A0A1W2PRG0 241 aa11.84□□□□□ -0.51
SNED1-211ENST00000491761 GOLGA6BA6NDN3 693 aa11.84□□□□□ -0.51
SNED1-211ENST00000491761 TDP2O95551 362 aa11.84□□□□□ -0.51
SNED1-211ENST00000491761 VSNL1P62760 191 aa11.84□□□□□ -0.51
SNED1-211ENST00000491761 GRIPAP1Q4V328 841 aa11.84□□□□□ -0.51
SNED1-211ENST00000491761 GUF1Q8N442 669 aaKnown RBP11.84□□□□□ -0.51
SNED1-211ENST00000491761 ZNF507Q8TCN5 953 aa11.84□□□□□ -0.51
SNED1-211ENST00000491761 PNKPQ96T60 521 aa11.84□□□□□ -0.51
SNED1-211ENST00000491761 DUSP9Q99956 384 aaKnown RBP11.84□□□□□ -0.51
SNED1-211ENST00000491761 KCNK9Q9NPC2 374 aa11.84□□□□□ -0.51
SNED1-211ENST00000491761 MTMR4Q9NYA4 1195 aa11.84□□□□□ -0.51
SNED1-211ENST00000491761 KDM3AQ9Y4C1 1321 aa11.83□□□□□ -0.51
SNED1-211ENST00000491761 POTEMA6NI47 508 aa11.83□□□□□ -0.52
SNED1-211ENST00000491761 ATP1A1P05023 1023 aaKnown RBP11.83□□□□□ -0.52
SNED1-211ENST00000491761 VIMP08670 466 aaKnown RBP11.83□□□□□ -0.52
SNED1-211ENST00000491761 LRRC41Q15345 812 aa11.83□□□□□ -0.52
SNED1-211ENST00000491761 CCDC6Q16204 474 aa11.83□□□□□ -0.52
SNED1-211ENST00000491761 FAM26FQ5R3K3 315 aa11.83□□□□□ -0.52
SNED1-211ENST00000491761 RAD54LQ92698 747 aa11.83□□□□□ -0.52
SNED1-211ENST00000491761 EXOC4Q96A65 974 aa11.83□□□□□ -0.52
SNED1-211ENST00000491761 PANK4Q9NVE7 773 aa11.83□□□□□ -0.52
SNED1-211ENST00000491761 PLCH1Q4KWH8 1693 aa11.83□□□□□ -0.52
SNED1-211ENST00000491761 ANO9A1A5B4 782 aa11.83□□□□□ -0.52
SNED1-211ENST00000491761 SRGAP2O75044 1071 aa11.83□□□□□ -0.52
SNED1-211ENST00000491761 PDHBP11177 359 aa11.83□□□□□ -0.52
SNED1-211ENST00000491761 GCFC2P16383 781 aaKnown RBP11.83□□□□□ -0.52
SNED1-211ENST00000491761 GUCY2FP51841 1108 aa11.83□□□□□ -0.52
SNED1-211ENST00000491761 PDIA5Q14554 519 aa11.83□□□□□ -0.52
SNED1-211ENST00000491761 UBE2SQ16763 222 aa11.83□□□□□ -0.52
SNED1-211ENST00000491761 HERC4Q5GLZ8 1057 aaPredicted RBP11.83□□□□□ -0.52
SNED1-211ENST00000491761 KCTD16Q68DU8 428 aa11.83□□□□□ -0.52
SNED1-211ENST00000491761 C15orf52Q6ZUT6 534 aaKnown RBP11.83□□□□□ -0.52
SNED1-211ENST00000491761 ERGIC2Q96RQ1 377 aa11.83□□□□□ -0.52
SNED1-211ENST00000491761 NLRC4Q9NPP4 1024 aa11.83□□□□□ -0.52
SNED1-211ENST00000491761 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.83□□□□□ -0.52
SNED1-211ENST00000491761 TBC1D7Q9P0N9 293 aa11.83□□□□□ -0.52
SNED1-211ENST00000491761 MYMKA6NI61 221 aa11.83□□□□□ -0.52
SNED1-211ENST00000491761 EIF4A3P38919 411 aaKnown RBP11.83□□□□□ -0.52
SNED1-211ENST00000491761 KLK7P49862 253 aa11.83□□□□□ -0.52
SNED1-211ENST00000491761 SLC9C1Q4G0N8 1177 aa11.83□□□□□ -0.52
SNED1-211ENST00000491761 BEND6Q5SZJ8 279 aaPredicted RBP11.83□□□□□ -0.52
SNED1-211ENST00000491761 C8orf74Q6P047 294 aa11.83□□□□□ -0.52
SNED1-211ENST00000491761 DDX12PQ92771 950 aa11.83□□□□□ -0.52
SNED1-211ENST00000491761 NUCKS1Q9H1E3 243 aaKnown RBP11.83□□□□□ -0.52
SNED1-211ENST00000491761 PPANQ9NQ55 473 aaKnown RBP11.83□□□□□ -0.52
SNED1-211ENST00000491761 M0R2N6 131 aa11.82□□□□□ -0.52
SNED1-211ENST00000491761 SEPT2Q15019 361 aa11.82□□□□□ -0.52
SNED1-211ENST00000491761 PPP1R18Q6NYC8 613 aa11.82□□□□□ -0.52
SNED1-211ENST00000491761 TMC4Q7Z404 712 aa11.82□□□□□ -0.52
SNED1-211ENST00000491761 NOA1Q8NC60 698 aaKnown RBP11.82□□□□□ -0.52
SNED1-211ENST00000491761 TBC1D16Q8TBP0 767 aa11.82□□□□□ -0.52
SNED1-211ENST00000491761 FAM71BQ8TC56 605 aa11.82□□□□□ -0.52
SNED1-211ENST00000491761 NOX5Q96PH1 765 aa11.82□□□□□ -0.52
SNED1-211ENST00000491761 MED4Q9NPJ6 270 aa11.82□□□□□ -0.52
SNED1-211ENST00000491761 RAB21Q9UL25 225 aa11.82□□□□□ -0.52
SNED1-211ENST00000491761 DAGLAQ9Y4D2 1042 aa11.82□□□□□ -0.52
SNED1-211ENST00000491761 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.82□□□□□ -0.52
SNED1-211ENST00000491761 DDX60Q8IY21 1712 aaKnown RBP11.82□□□□□ -0.52
SNED1-211ENST00000491761 ROBO1Q9Y6N7 1651 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 103.1 ms