RNA–Protein interactions for RNA: ENST00000491402.5

VCPKMT-204, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best)

Gene VCPKMT, Length 1,793 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-204ENST00000491402 NFKBIBQ15653 356 aa24.61■■□□□ 1.53
VCPKMT-204ENST00000491402 ZNF467Q7Z7K2 595 aaPredicted RBP24.61■■□□□ 1.53
VCPKMT-204ENST00000491402 ETNPPLQ8TBG4 499 aa24.61■■□□□ 1.53
VCPKMT-204ENST00000491402 HAS1Q92839 578 aa24.61■■□□□ 1.53
VCPKMT-204ENST00000491402 FERMT2Q96AC1 680 aa24.61■■□□□ 1.53
VCPKMT-204ENST00000491402 WDR11Q9BZH6 1224 aa24.61■■□□□ 1.53
VCPKMT-204ENST00000491402 JADE2Q9NQC1 790 aa24.61■■□□□ 1.53
VCPKMT-204ENST00000491402 SLC5A4Q9NY91 659 aa24.61■■□□□ 1.53
VCPKMT-204ENST00000491402 SRPRBQ9Y5M8 271 aaKnown RBP24.61■■□□□ 1.53
VCPKMT-204ENST00000491402 RGS2P41220 211 aa24.6■■□□□ 1.53
VCPKMT-204ENST00000491402 INPP4AQ96PE3 977 aaPredicted RBP24.6■■□□□ 1.53
VCPKMT-204ENST00000491402 ASB14A6NK59 587 aa24.59■■□□□ 1.53
VCPKMT-204ENST00000491402 TBX3O15119 743 aa24.59■■□□□ 1.53
VCPKMT-204ENST00000491402 MSH4O15457 936 aa24.59■■□□□ 1.53
VCPKMT-204ENST00000491402 EIF3JO75822 258 aaKnown RBP24.59■■□□□ 1.53
VCPKMT-204ENST00000491402 RGS20O76081 388 aa24.59■■□□□ 1.53
VCPKMT-204ENST00000491402 HOXC6P09630 235 aa24.59■■□□□ 1.53
VCPKMT-204ENST00000491402 GRIN1Q05586 938 aa24.59■■□□□ 1.53
VCPKMT-204ENST00000491402 MTMR1Q13613 665 aa24.59■■□□□ 1.53
VCPKMT-204ENST00000491402 IL17AQ16552 155 aa24.59■■□□□ 1.53
VCPKMT-204ENST00000491402 AXDND1Q5T1B0 1012 aaPredicted RBP24.59■■□□□ 1.53
VCPKMT-204ENST00000491402 NPLOC4Q8TAT6 608 aa24.59■■□□□ 1.53
VCPKMT-204ENST00000491402 MORC4Q8TE76 937 aa24.59■■□□□ 1.53
VCPKMT-204ENST00000491402 MAML3Q96JK9 1138 aa24.59■■□□□ 1.53
VCPKMT-204ENST00000491402 KCNH7Q9NS40 1196 aa24.59■■□□□ 1.53
VCPKMT-204ENST00000491402 PTPN22Q9Y2R2 807 aa24.59■■□□□ 1.53
VCPKMT-204ENST00000491402 VWA3AA6NCI4 1184 aa24.59■■□□□ 1.53
VCPKMT-204ENST00000491402 GADD45BO75293 160 aaPredicted RBP24.59■■□□□ 1.53
VCPKMT-204ENST00000491402 ARP10275 920 aa24.59■■□□□ 1.53
VCPKMT-204ENST00000491402 PRMT2P55345 433 aa24.59■■□□□ 1.53
VCPKMT-204ENST00000491402 RAET1EQ8TD07 263 aa24.59■■□□□ 1.53
VCPKMT-204ENST00000491402 GJA10Q969M2 543 aa24.59■■□□□ 1.53
VCPKMT-204ENST00000491402 CLIC6Q96NY7 704 aa24.59■■□□□ 1.53
VCPKMT-204ENST00000491402 ADALQ6DHV7 355 aa24.58■■□□□ 1.53
VCPKMT-204ENST00000491402 DTHD1Q6ZMT9 781 aa24.58■■□□□ 1.53
VCPKMT-204ENST00000491402 ARMCX2Q7L311 632 aa24.58■■□□□ 1.53
VCPKMT-204ENST00000491402 SLFN12Q8IYM2 578 aa24.58■■□□□ 1.53
VCPKMT-204ENST00000491402 GPRASP2Q96D09 838 aa24.58■■□□□ 1.53
VCPKMT-204ENST00000491402 UIMC1Q96RL1 719 aa24.58■■□□□ 1.53
VCPKMT-204ENST00000491402 PTCH2Q9Y6C5 1203 aa24.58■■□□□ 1.53
VCPKMT-204ENST00000491402 GOLGA6L4A6NEF3 574 aa24.57■■□□□ 1.52
VCPKMT-204ENST00000491402 MARCH6O60337 910 aa24.57■■□□□ 1.52
VCPKMT-204ENST00000491402 CUTAO60888 179 aa24.57■■□□□ 1.52
VCPKMT-204ENST00000491402 TXKP42681 527 aa24.57■■□□□ 1.52
VCPKMT-204ENST00000491402 UBE2HP62256 183 aa24.57■■□□□ 1.52
VCPKMT-204ENST00000491402 CCL14Q16627 93 aa24.57■■□□□ 1.52
VCPKMT-204ENST00000491402 GNPTABQ3T906 1256 aa24.57■■□□□ 1.52
VCPKMT-204ENST00000491402 TPRNQ4KMQ1 711 aa24.57■■□□□ 1.52
VCPKMT-204ENST00000491402 MAMDC4Q6UXC1 1216 aa24.57■■□□□ 1.52
VCPKMT-204ENST00000491402 NLRX1Q86UT6 975 aa24.57■■□□□ 1.52
VCPKMT-204ENST00000491402 FAM20AQ96MK3 541 aa24.57■■□□□ 1.52
VCPKMT-204ENST00000491402 IRF5Q13568 498 aa24.57■■□□□ 1.52
VCPKMT-204ENST00000491402 APBA2Q99767 749 aa24.57■■□□□ 1.52
VCPKMT-204ENST00000491402 TTC12Q9H892 705 aaPredicted RBP24.57■■□□□ 1.52
VCPKMT-204ENST00000491402 HTTP42858 3142 aa24.56■■□□□ 1.52
VCPKMT-204ENST00000491402 XRCC5P13010 732 aaKnown RBP24.56■■□□□ 1.52
VCPKMT-204ENST00000491402 EEPD1Q7L9B9 569 aa24.56■■□□□ 1.52
VCPKMT-204ENST00000491402 ZNF577Q9BSK1 485 aa24.56■■□□□ 1.52
VCPKMT-204ENST00000491402 CSRNP2Q9H175 543 aa24.56■■□□□ 1.52
VCPKMT-204ENST00000491402 FLRT1Q9NZU1 646 aa24.56■■□□□ 1.52
VCPKMT-204ENST00000491402 IPO5O00410 1097 aaKnown RBP24.55■■□□□ 1.52
VCPKMT-204ENST00000491402 MAFGO15525 162 aa24.55■■□□□ 1.52
VCPKMT-204ENST00000491402 ADCY3O60266 1144 aa24.55■■□□□ 1.52
VCPKMT-204ENST00000491402 ELNP15502 786 aa24.55■■□□□ 1.52
VCPKMT-204ENST00000491402 TECP42680 631 aa24.55■■□□□ 1.52
VCPKMT-204ENST00000491402 SEMA3FQ13275 785 aa24.55■■□□□ 1.52
VCPKMT-204ENST00000491402 MSL3Q8N5Y2 521 aaKnown RBP24.55■■□□□ 1.52
VCPKMT-204ENST00000491402 ZNF579Q8NAF0 562 aaKnown RBP24.55■■□□□ 1.52
VCPKMT-204ENST00000491402 SLC5A5Q92911 643 aa24.55■■□□□ 1.52
VCPKMT-204ENST00000491402 AGO4Q9HCK5 861 aaKnown RBP24.55■■□□□ 1.52
VCPKMT-204ENST00000491402 PCDHA12Q9UN75 941 aa24.55■■□□□ 1.52
VCPKMT-204ENST00000491402 FXR2P51116 673 aaKnown RBP eCLIP24.54■■□□□ 1.52
VCPKMT-204ENST00000491402 TMEM266Q2M3C6 531 aa24.54■■□□□ 1.52
VCPKMT-204ENST00000491402 SEPT14Q6ZU15 432 aa24.54■■□□□ 1.52
VCPKMT-204ENST00000491402 CDHR1Q96JP9 859 aa24.54■■□□□ 1.52
VCPKMT-204ENST00000491402 SYNGAP1Q96PV0 1343 aa24.54■■□□□ 1.52
VCPKMT-204ENST00000491402 TINF2Q9BSI4 451 aa24.54■■□□□ 1.52
VCPKMT-204ENST00000491402 A0A1W2PQ27 194 aa24.54■■□□□ 1.52
VCPKMT-204ENST00000491402 A0A1W2PQ64 194 aa24.54■■□□□ 1.52
VCPKMT-204ENST00000491402 A0A1W2PQD8 194 aa24.54■■□□□ 1.52
VCPKMT-204ENST00000491402 LONP1P36776 959 aaKnown RBP24.54■■□□□ 1.52
VCPKMT-204ENST00000491402 SPECC1Q5M775 1068 aa24.54■■□□□ 1.52
VCPKMT-204ENST00000491402 SHC4Q6S5L8 630 aa24.54■■□□□ 1.52
VCPKMT-204ENST00000491402 FBXO16Q8IX29 292 aaPredicted RBP24.54■■□□□ 1.52
VCPKMT-204ENST00000491402 DOCK5Q9H7D0 1870 aa24.53■■□□□ 1.52
VCPKMT-204ENST00000491402 SPATA31C2B4DYI2 1134 aa24.53■■□□□ 1.52
VCPKMT-204ENST00000491402 PTMSP20962 102 aa24.53■■□□□ 1.52
VCPKMT-204ENST00000491402 ICAM3P32942 547 aa24.53■■□□□ 1.52
VCPKMT-204ENST00000491402 PKN2Q16513 984 aaKnown RBP24.53■■□□□ 1.52
VCPKMT-204ENST00000491402 LRCH2Q5VUJ6 765 aa24.53■■□□□ 1.52
VCPKMT-204ENST00000491402 IGSF22Q8N9C0 903 aa24.53■■□□□ 1.52
VCPKMT-204ENST00000491402 TRIB2Q92519 343 aa24.53■■□□□ 1.52
VCPKMT-204ENST00000491402 CDKN2AIPQ9NXV6 580 aaPredicted RBP24.53■■□□□ 1.52
VCPKMT-204ENST00000491402 PKD2L1Q9P0L9 805 aa24.53■■□□□ 1.52
VCPKMT-204ENST00000491402 CENPFP49454 3210 aa24.53■■□□□ 1.52
VCPKMT-204ENST00000491402 ATP9AO75110 1047 aa24.52■■□□□ 1.52
VCPKMT-204ENST00000491402 PSMD10O75832 226 aa24.52■■□□□ 1.52
VCPKMT-204ENST00000491402 ITGB3BPQ13352 177 aaPredicted RBP24.52■■□□□ 1.52
VCPKMT-204ENST00000491402 OLFML2BQ68BL8 750 aa24.52■■□□□ 1.52
VCPKMT-204ENST00000491402 FBXO46Q6PJ61 603 aaPredicted RBP24.52■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms