RNA–Protein interactions for RNA: ENST00000491258.1

PHC3-213, Transcript of polyhomeotic homolog 3, humanhuman

TSL 1 (best)

Gene PHC3, Length 719 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-213ENST00000491258 CCDC103Q8IW40 242 aa6.88□□□□□ -1.31
PHC3-213ENST00000491258 Q8N1Y9 231 aa6.88□□□□□ -1.31
PHC3-213ENST00000491258 TOE1Q96GM8 510 aaKnown RBP6.88□□□□□ -1.31
PHC3-213ENST00000491258 CHAMP1Q96JM3 812 aa6.88□□□□□ -1.31
PHC3-213ENST00000491258 SORCS2Q96PQ0 1159 aa6.88□□□□□ -1.31
PHC3-213ENST00000491258 JADE2Q9NQC1 790 aa6.88□□□□□ -1.31
PHC3-213ENST00000491258 DTLQ9NZJ0 730 aa6.88□□□□□ -1.31
PHC3-213ENST00000491258 ZNF652Q9Y2D9 606 aa6.88□□□□□ -1.31
PHC3-213ENST00000491258 TSC22D4Q9Y3Q8 395 aa6.88□□□□□ -1.31
PHC3-213ENST00000491258 TBX1O43435 398 aa6.87□□□□□ -1.31
PHC3-213ENST00000491258 KCNAB2Q13303 367 aa6.87□□□□□ -1.31
PHC3-213ENST00000491258 CDSNQ15517 529 aa6.87□□□□□ -1.31
PHC3-213ENST00000491258 CHRNA2Q15822 529 aa6.87□□□□□ -1.31
PHC3-213ENST00000491258 CIR1Q86X95 450 aaPredicted RBP6.87□□□□□ -1.31
PHC3-213ENST00000491258 ARRDC4Q8NCT1 418 aa6.87□□□□□ -1.31
PHC3-213ENST00000491258 YTHDC1Q96MU7 727 aaKnown RBP6.87□□□□□ -1.31
PHC3-213ENST00000491258 KLC2Q9H0B6 622 aa6.87□□□□□ -1.31
PHC3-213ENST00000491258 LRP2BPQ9P2M1 347 aa6.87□□□□□ -1.31
PHC3-213ENST00000491258 FBXL7Q9UJT9 491 aa6.87□□□□□ -1.31
PHC3-213ENST00000491258 PCDHB4Q9Y5E5 795 aa6.87□□□□□ -1.31
PHC3-213ENST00000491258 HGSO14964 777 aaPredicted RBP6.86□□□□□ -1.31
PHC3-213ENST00000491258 HMGA2P52926 109 aa6.86□□□□□ -1.31
PHC3-213ENST00000491258 MLLT6P55198 1093 aaPredicted RBP6.86□□□□□ -1.31
PHC3-213ENST00000491258 STEAP3Q658P3 488 aa6.86□□□□□ -1.31
PHC3-213ENST00000491258 ZNF585AQ6P3V2 769 aa6.86□□□□□ -1.31
PHC3-213ENST00000491258 ARHGEF18Q6ZSZ5 1173 aa6.86□□□□□ -1.31
PHC3-213ENST00000491258 PALM2Q8IXS6 379 aa6.86□□□□□ -1.31
PHC3-213ENST00000491258 IGDCC4Q8TDY8 1250 aa6.86□□□□□ -1.31
PHC3-213ENST00000491258 MBD6Q96DN6 1003 aa6.86□□□□□ -1.31
PHC3-213ENST00000491258 SEC16BQ96JE7 1060 aa6.86□□□□□ -1.31
PHC3-213ENST00000491258 CDK5RAP1Q96SZ6 601 aaKnown RBP6.86□□□□□ -1.31
PHC3-213ENST00000491258 DEF6Q9H4E7 631 aa6.86□□□□□ -1.31
PHC3-213ENST00000491258 TCRBV5S2A0A599 114 aa6.85□□□□□ -1.31
PHC3-213ENST00000491258 ARNTLO00327 626 aa6.85□□□□□ -1.31
PHC3-213ENST00000491258 GPR42O15529 346 aa6.85□□□□□ -1.31
PHC3-213ENST00000491258 CYP7B1O75881 506 aa6.85□□□□□ -1.31
PHC3-213ENST00000491258 VAMP1P23763 118 aa6.85□□□□□ -1.31
PHC3-213ENST00000491258 HOXC12P31275 282 aa6.85□□□□□ -1.31
PHC3-213ENST00000491258 KCNJ6P48051 423 aa6.85□□□□□ -1.31
PHC3-213ENST00000491258 PPP2CBP62714 309 aa6.85□□□□□ -1.31
PHC3-213ENST00000491258 PPP2CAP67775 309 aa6.85□□□□□ -1.31
PHC3-213ENST00000491258 HDLBPQ00341 1268 aaKnown RBP6.85□□□□□ -1.31
PHC3-213ENST00000491258 PRSS53Q2L4Q9 553 aa6.85□□□□□ -1.31
PHC3-213ENST00000491258 SV2CQ496J9 727 aa6.85□□□□□ -1.31
PHC3-213ENST00000491258 TEPPQ6URK8 271 aa6.85□□□□□ -1.31
PHC3-213ENST00000491258 KBTBD2Q8IY47 623 aa6.85□□□□□ -1.31
PHC3-213ENST00000491258 Q8N1X5 172 aa6.85□□□□□ -1.31
PHC3-213ENST00000491258 RCBTB1Q8NDN9 531 aa6.85□□□□□ -1.31
PHC3-213ENST00000491258 FTSJ1Q9UET6 329 aa6.85□□□□□ -1.31
PHC3-213ENST00000491258 STRIP2Q9ULQ0 834 aa6.85□□□□□ -1.31
PHC3-213ENST00000491258 PCDHA2Q9Y5H9 948 aa6.85□□□□□ -1.31
PHC3-213ENST00000491258 ITGAVP06756 1048 aa6.84□□□□□ -1.31
PHC3-213ENST00000491258 LSAMPQ13449 338 aa6.84□□□□□ -1.31
PHC3-213ENST00000491258 TRMT10BQ6PF06 316 aaKnown RBP6.84□□□□□ -1.31
PHC3-213ENST00000491258 TMC5Q6UXY8 1006 aa6.84□□□□□ -1.31
PHC3-213ENST00000491258 ZNF227Q86WZ6 799 aa6.84□□□□□ -1.31
PHC3-213ENST00000491258 ZFPM1Q8IX07 1006 aa6.84□□□□□ -1.31
PHC3-213ENST00000491258 PPIL6Q8IXY8 311 aa6.84□□□□□ -1.31
PHC3-213ENST00000491258 ZCCHC14Q8WYQ9 949 aaKnown RBP6.84□□□□□ -1.31
PHC3-213ENST00000491258 TMEM209Q96SK2 561 aa6.84□□□□□ -1.31
PHC3-213ENST00000491258 MRIQ9BWK5 157 aa6.84□□□□□ -1.31
PHC3-213ENST00000491258 VPS11Q9H270 941 aa6.84□□□□□ -1.31
PHC3-213ENST00000491258 CLDND1Q9NY35 253 aa6.84□□□□□ -1.31
PHC3-213ENST00000491258 H7BY64 318 aa6.83□□□□□ -1.32
PHC3-213ENST00000491258 B4GALT4O60513 344 aa6.83□□□□□ -1.32
PHC3-213ENST00000491258 LCP1P13796 627 aa6.83□□□□□ -1.32
PHC3-213ENST00000491258 LTBRP36941 435 aa6.83□□□□□ -1.32
PHC3-213ENST00000491258 EPHB4P54760 987 aa6.83□□□□□ -1.32
PHC3-213ENST00000491258 SF1Q15637 639 aaKnown RBP6.83□□□□□ -1.32
PHC3-213ENST00000491258 LARP1BQ659C4 914 aaKnown RBP6.83□□□□□ -1.32
PHC3-213ENST00000491258 PKN3Q6P5Z2 889 aa6.83□□□□□ -1.32
PHC3-213ENST00000491258 CRIP3Q6Q6R5 217 aa6.83□□□□□ -1.32
PHC3-213ENST00000491258 C6orf15Q6UXA7 325 aaPredicted RBP6.83□□□□□ -1.32
PHC3-213ENST00000491258 KREMEN2Q8NCW0 462 aa6.83□□□□□ -1.32
PHC3-213ENST00000491258 WRNIP1Q96S55 665 aa6.83□□□□□ -1.32
PHC3-213ENST00000491258 CD248Q9HCU0 757 aa6.83□□□□□ -1.32
PHC3-213ENST00000491258 ZDHHC9Q9Y397 364 aa6.83□□□□□ -1.32
PHC3-213ENST00000491258 TADA3O75528 432 aa6.82□□□□□ -1.32
PHC3-213ENST00000491258 CPP00450 1065 aa6.82□□□□□ -1.32
PHC3-213ENST00000491258 LRG1P02750 347 aa6.82□□□□□ -1.32
PHC3-213ENST00000491258 SLPIP03973 132 aa6.82□□□□□ -1.32
PHC3-213ENST00000491258 ACBD5Q5T8D3 534 aaPredicted RBP6.82□□□□□ -1.32
PHC3-213ENST00000491258 PTPN18Q99952 460 aa6.82□□□□□ -1.32
PHC3-213ENST00000491258 ZNF747Q9BV97 191 aa6.82□□□□□ -1.32
PHC3-213ENST00000491258 BARX1Q9HBU1 254 aaPredicted RBP6.82□□□□□ -1.32
PHC3-213ENST00000491258 MYOTQ9UBF9 498 aa6.82□□□□□ -1.32
PHC3-213ENST00000491258 INPP5FQ9Y2H2 1132 aa6.82□□□□□ -1.32
PHC3-213ENST00000491258 TCAF1Q9Y4C2 921 aa6.82□□□□□ -1.32
PHC3-213ENST00000491258 B2RBV5 119 aa6.81□□□□□ -1.32
PHC3-213ENST00000491258 DGKIO75912 1065 aa6.81□□□□□ -1.32
PHC3-213ENST00000491258 AMHP03971 560 aa6.81□□□□□ -1.32
PHC3-213ENST00000491258 SCG5P05408 212 aa6.81□□□□□ -1.32
PHC3-213ENST00000491258 MFAP1P55081 439 aaKnown RBP6.81□□□□□ -1.32
PHC3-213ENST00000491258 NFATC3Q12968 1075 aa6.81□□□□□ -1.32
PHC3-213ENST00000491258 EMC4Q5J8M3 183 aa6.81□□□□□ -1.32
PHC3-213ENST00000491258 USP51Q70EK9 711 aa6.81□□□□□ -1.32
PHC3-213ENST00000491258 KLHL36Q8N4N3 616 aa6.81□□□□□ -1.32
PHC3-213ENST00000491258 DNERQ8NFT8 737 aa6.81□□□□□ -1.32
PHC3-213ENST00000491258 ACBD3Q9H3P7 528 aa6.81□□□□□ -1.32
PHC3-213ENST00000491258 EPB41L1Q9H4G0 881 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms